ID AJ420319; SV 1; circular; genomic DNA; STD; VRL; 2714 BP. XX AC AJ420319; XX DT 04-JAN-2002 (Rel. 70, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Squash leaf curl Yunnan virus complete genome, isolate Y23 XX KW AC1 gene; AC1 protein; AC2 gene; AC2 protein; AC3 gene; AC3 protein; KW AC4 gene; AC4 protein; AV1 gene; AV1 protein; AV2 gene; AV2 protein; KW complete genome. XX OS Squash leaf curl Yunnan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2714 RA Zhou X.; RT ; RL Submitted (16-NOV-2001) to the INSDC. RL Zhou X., Zhejiang University, Institute of Biotechnology, Kaixuan Road 268, RL Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RX DOI; 10.1007/s00705-003-0153-2. RX PUBMED; 14551824. RA Xie Y., Zhou X.; RT "Molecular characterization of squash leaf curl Yunnan virus, a new RT begomovirus and evidence for recombination"; RL Arch. Virol. 148(10):2047-2054(2003). XX DR MD5; bdc398555c37f2add5da36b1326cdee5. DR EuropePMC; PMC3126389; 21378048. DR EuropePMC; PMC3550763; 23637479. XX FH Key Location/Qualifiers FH FT source 1..2714 FT /organism="Squash leaf curl Yunnan virus" FT /isolate="Y23" FT /mol_type="genomic DNA" FT /country="China:Yunnan" FT /db_xref="taxon:222474" FT CDS 135..473 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:Q8UYW5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8UYW5" FT /protein_id="CAD12417.1" FT /translation="MWDPLLNEFPENVHGFRCMLAVKYLQEIEKTYSPDTLGFDLIRDL FT TGVIRAKNYVEASSRYSHFYARLESTSPSELRQPIQQPCCCPHCPRHKRADMEEPTCIQ FT KAQVLQNV" FT CDS 295..1065 FT /gene="AV1" FT /product="AV1 protein" FT /function="coat protein" FT /db_xref="GOA:Q8UYW4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8UYW4" FT /protein_id="CAD12418.1" FT /translation="MSKRPADILISTPVSKVRRRLNFDSPYNSRAAVPTVRVTKGQIWK FT NRPAYRKPKFYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHR FT VDKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPYDFQQVFNVYDNEP FT STATVKNDQRDRFQVIRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENH FT TENALLLYMACTHASNPVYATLKVRSYFYDSVTN" FT CDS complement(1031..1438) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:Q8UYW3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8UYW3" FT /protein_id="CAD12419.1" FT /translation="MDSRTGELLTATQSESGVYIWTVKNPLYFKITRHTESPFWRNHDI FT ITLQIQFNNNLRKALGIHKCFLVCKIWTHLHPQTSRFLVVFKYQCNKYLDKLGVIIINN FT VNVLEGTIDVIEDHDIYLLFINSSLSHRNNS" FT CDS complement(1179..1583) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:Q8UYW2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q8UYW2" FT /protein_id="CAD12420.1" FT /translation="MRSSSPSKAHSTQIPIKVQHRIAKRTIRRRRVDLRCGCSYFVAIG FT CHNNGFTHRGTTHCNSIREWRIYLDGKKSPIFQDNQAHREPILEEPRHNHVTNTVQQQP FT EESVGDTQMFSSLQNLDSFTSSDLALLSSI" FT CDS complement(1486..2571) FT /gene="AC1" FT /product="AC1 protein" FT /function="Rep protein" FT /db_xref="GOA:Q8UYW1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8UYW1" FT /protein_id="CAD12421.1" FT /translation="MPRTNQFQVKAKNIFLTFPKCPIPKEQMLELLQNISCPSDKLFIR FT VSQEKHQDGSMHIHALIQFKGKCQFRNPRHFDVTHPNTSTQYHPNFQGAKSSSDVKSYI FT EKDGDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSAEAALAIMREKLPKDYIFQYH FT NIKCNLDRIFTPPIEEYISPFSSSSFNQVPGELEEWACNNVLSEAARPFRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRNWAIKNAIFVTLEGPL FT YSDTYQGATPNSEEDNQTTES" FT CDS complement(2130..2414) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8UYW0" FT /protein_id="CAD12422.1" FT /translation="MGLCISTRSSNSKVNASSETPDISMSLTLIPQLNTIQTSRELNPA FT PMSNLTSRRTVITSTGVSFRSMDDLLEEVNRQLMMQQQRPSMQVRLKRR" XX SQ Sequence 2714 BP; 718 A; 543 C; 594 G; 859 T; 0 other; accggatggc cgcgattttt ttttaaagtg gttctttgat gtgatgtttc agcctatcaa 60 atcgctccct cacagcttaa ttatttatgg tcccctattt aagacttagt ccccaagttt 120 ccccgaaatg caaaatgtgg gatccactcc taaacgaatt tccagaaaac gtccacggtt 180 ttcgttgtat gttagcggtg aagtacctgc aagagatcga aaagacgtat tcccctgata 240 ccctaggatt tgatctcatt cgtgatctta ccggtgtaat tcgtgcgaag aattatgtcg 300 aagcgtccag cagatattct catttctacg cccgtctcga aagtacgtcg ccgtctgaac 360 ttcgacagcc catacaacag ccgtgctgct gtccccactg tccgcgtcac aaaagggcag 420 atatggaaga accgacctgc atacagaaag cccaagttct acagaatgta tagaagccct 480 gatgtcccta agggatgtga gggtccatgt aaggtccaat ctttcgatgc gaagaacgac 540 attggacata tgggcaaggt aatctgtttg tctgacgtta cccgtggtat tgggcttact 600 catcgagttg acaagcgatt ctgtgtgaag tcactttatt ttgtcgggaa gatctggatg 660 gatgaaaata ttaaggttaa gaatcacact aacaccgttt tattctggat agttagggat 720 cggcgtccta ctggaacgcc ttatgatttt cagcaggtgt ttaatgtata tgataatgaa 780 cccagcactg ctactgtgaa gaacgatcag cgtgatcgtt tccaggttat aaggaggttc 840 caggctactg ttactggtgg acaatatgca gctaaggagc aggcgattat tagaaagttt 900 tatcgtgtta ataattatgt agtttacaat caccaggaag ctgggaagta cgagaaccat 960 actgaaaatg ctctattgtt gtatatggca tgtactcatg cctctaatcc tgtgtatgct 1020 actttgaaag tcaggagtta tttctatgac tcagtgacga attaataaat agtaaatata 1080 tatcatgatc ttcaattaca tcaattgttc cttctaatac attgacattg tttataataa 1140 tcacgcctaa tttatctaaa tatttattac actgatattt aaatactact aagaagcgcg 1200 aggtctgagg atgtaaatga gtccagattt tgcagactag aaaacatttg tgtatcccca 1260 acgctttcct caggttgttg ttgaactgta tttgtaacgt gattatgtcg tggttcctcc 1320 agaatgggct ctctgtgtgc ctggttatct tgaaatatag gggatttttt accgtccaga 1380 tatatacgcc actctctgat tgagttgcag tgagtagttc cccggtgcgt gaatccatta 1440 ttgtgacagc ctatggcgac gaagtacgaa catccgcaac gtagatcaac tctccgtcgt 1500 ctgattgtcc tcttcgctat tcggtgttgc accttgatag gtatctgagt agagtgggcc 1560 ttcgagggtg acgaagatcg cattctttat ggcccagttt ctgagtgcgg agttcttttc 1620 ttcttccaag tactctttat agctggagtt tggtccagga ttgcagagga atatagtggg 1680 aattccacct ttaatttgaa ctggcttccc gtattttgtg ttgctttgcc agtccctttg 1740 ggcccccatg aactctttaa agtgttttag atagtgcgga tcgacgtcat caatgacgtt 1800 gtaccaagca tcattattat acacttttgg acttaaatct aaatggccac atagataatt 1860 atgtggtccc aatgacctag cccacatcgt cttccctgtt ctactatcac cctcaattac 1920 tatacttatt ggcctaaatg gccgcgcagc ttcactgaga acattattac aagcccattc 1980 ttcaagttct ccgggaactt gattaaaaga agaagaagaa aagggagaaa tatattcctc 2040 tataggagga gtaaaaatcc gatctaaatt acattttata ttgtgatatt ggaaaatata 2100 atcttttgga agtttttccc tcattattgc taacgccgct tcagccgaac ctgcattgag 2160 ggcctctgct gctgcatcat tagctgtctg ttgacctcct ctagcagatc gtccatcgat 2220 ctgaaactga ccccagtcga tgtaatcacc gtccttctcg atgtaagatt tgacatcgga 2280 gctggattta gctccctgga agtttggatg gtattgagtt gaggtattag ggtgagtgac 2340 atcgaaatgt ctggggtttc tgaactggca tttacctttg aattggatga gcgcgtggat 2400 atgcatagac ccatcttggt gtttttcttg tgatactctg ataaataatt tgtcagatgg 2460 acatgaaatg ttttgaagga gttcgagcat ctgctctttc ggtattgggc attttgggaa 2520 agtgagaaag atattttttg ccttaacttg gaattggttt gtacgtggca tattgaattg 2580 ggtgctctac aaacctcata ggaatggggt gctttgggtg cctatttata tcgagctccc 2640 aaatggcaat tttgtaattt tgaaaagtaa ttcaaaaccc taacgctccc aaaagcggac 2700 atccgtataa tatt 2714 //