ID AJ418781; SV 1; linear; genomic RNA; STD; VRL; 2965 BP. XX AC AJ418781; XX DT 02-MAY-2002 (Rel. 71, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Tomato spotted wilt virus NSs gene and N gene, genomic RNA, isolate DE LE98/527 XX KW N gene; NSs gene; N protein; NSs protein. XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2965 RA Adam G.; RT ; RL Submitted (05-NOV-2001) to the INSDC. RL Adam G., Pflanzenschutz, Institut fuer ANgewandte Botanik, Ohnhorststrasse RL 18, 22609 Hamburg, GERMANY. XX RN [2] RX DOI; 10.1007/s00705-002-0882-7. RX PUBMED; 12536305. RA Heinze C., Willingmann P., chwach F., Adam G.; RT "An unusual large intergenic region in the S-RNA of a Bulgarian tomato RT spotted wilt virus isolate"; RL Arch. Virol. 148(1):199-205(2003). XX DR MD5; fb11c6d39d412d41aaff37972efe29b5. XX FH Key Location/Qualifiers FH FT source 1..2965 FT /organism="Orthotospovirus tomatomaculae" FT /host="Lysimachia sp." FT /isolate="LE98/527" FT /mol_type="genomic RNA" FT /country="Germany" FT /db_xref="taxon:3052585" FT CDS 89..1489 FT /gene="NSs" FT /product="NSs protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q8JXJ9" FT /protein_id="CAD11451.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSPLVQTQ FT LYSDSRSKSSFGYTAKVGNLPCEEEEILSQHVYIPIFDDIDFSINIDDSVLALSVCSNT FT VNTNGVKHQGHLKVLSLAQLHSIGSTMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPSFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNSQAFVKASTDSHFKLSLWLRVPKVLKQVSIQKLFKVAGDETKTFYLSIA FT CIPNHNSVETALNVSVICKHQLPIRKCKAPFGLSMMFSDLKEPYNIVHDPSYPQRIVHA FT LLETHTSFAQVLCNNLQEDVIIYTLNNYELTPGKLDLGERTLNYSEDICKRKYFLSKTL FT ECLPSNTQTMSYLDSIQIPSWKIDFARGEIKISPQPVSVAKSLLKLDLSGIEKKESKIP FT ETYASGSK" FT CDS complement(2038..2814) FT /gene="N" FT /product="N protein" FT /function="structural protein" FT /db_xref="GOA:Q88910" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q88910" FT /protein_id="CAD11452.1" FT /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" XX SQ Sequence 2965 BP; 937 A; 550 C; 479 G; 999 T; 0 other; agagcaatcg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggcactg gttctccact agttcaaacc cagctgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa ggtagggaat cttccctgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcattaatat 360 tgatgactct gttctggcac tatctgtttg ctcaaataca gtcaatacta acggagtgaa 420 acatcaaggt catttgaaag ttttgtctct tgctcagctc cactctattg gatctaccat 480 gaacagatct gatattacag accgattcca gcttcaagaa aaagacataa ttcccaatga 540 cagatacatc gaggctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttggg caaagtgaat gttttatccc ctaacaggaa 660 tgtccatgaa tggctgtaca gtttcaagcc aagtttcaat caagttgaaa gcaacaacag 720 aactgtaaat tctcttgcag tgaaatctct tctcatgtca gcagaaaaca acatcatgcc 780 taactctcag gcttttgtca aagcttccac tgattctcat ttcaaactga gcctctggct 840 aagggtccca aaggttctga agcaggtctc tattcagaaa ttgttcaaag ttgcaggaga 900 cgaaacaaaa acattttatt tatctattgc ttgcattcca aaccataaca gtgttgagac 960 agctttaaac gtttctgtta tttgcaagca tcagctccca attcgtaaat gtaaagctcc 1020 ttttggatta tcaatgatgt tttctgattt aaaggagcct tacaacattg ttcatgatcc 1080 ttcatatcct cagaggattg ttcatgctct gcttgaaact cacacatctt ttgcacaagt 1140 tctttgcaac aacttacaag aagatgtgat catctacact ttgaacaact atgagctaac 1200 tcctggaaag ttagatttag gcgaaagaac cttaaattac agtgaagata tctgcaaaag 1260 gaaatatttc ctttcaaaaa cacttgaatg tcttccatct aacacacaaa ctatgtctta 1320 cttggacagc atccaaatcc cttcctggaa gatagacttt gccaggggag aaattaagat 1380 ttctccacaa cctgtttcag ttgcaaaatc tttgttaaag cttgatttaa gcgggatcga 1440 aaagaaagaa tctaagattc cggaaacata tgcttcagga tcaaaataat cttgctgtgt 1500 ccggtttttc taattatgtt atgtttattt tctttcttta cttataatta tttctctgtt 1560 ttgtcatttc ttttaagttc ctcctgttta atagaaacca taaaacaaaa aataaaataa 1620 aaataaaaat aaaatcaaaa atgaaacaaa aatcaaaaaa tgaaacaaaa ataaaaaata 1680 aaaaatgaaa taaaaacaac aaaaaattaa aaaacaaaaa cccaaaaaag atcccgaaag 1740 ggacaatctt ggccaaattt gggttttgtt ttgtttttgt tttttgtttt ttgtttttat 1800 ttttattttt attttattta tttattttat tttattttta ttttttattt tgttttttat 1860 tttatgtttt tttgttgttt ttgttatttg tttatttatt aagcataaca cacagaaagc 1920 aaactttaat taaacacact tattttaaat ttaacacact aagcaagcac aagcaataaa 1980 gataaagaaa gctttatata tttgtagact tttccataat ttaacttaca actgatttta 2040 agcaagttct gcgagttttg cctgtttttt aaccccgaac atttcataga acttgttaag 2100 agtttcactg taatgttcca tagcaatact tcctttagca ttaggattgc tggagctgag 2160 tatagcagca tactctttcc ctttcttcac ctgatcttca ttcatttcga atgctttgct 2220 tttcagcaca gtgcaaactt ttcctaaggc ttctctggtg tcatacttct ttgggtcaat 2280 cccgaggtct ttgtattttg catcctgata tatagccaag acaacactga tcatctcaaa 2340 gctatcaact gaagcaataa gaggtaagct acctcccagc attatggcaa gcctcacaga 2400 ctttgcatca tcaagaggta atccataggc ttgaatcaaa gggtgggaag caatcttaga 2460 tttgatagta ttgagattct cagaattccc agtttcctct acaagcctga ccctgatcaa 2520 gctatcaagc cttctgaagg tcatgtcagt ggctccaatc ctgtctgaag ttttctttat 2580 ggtaatttta ccaaaagtaa aatcactttg tttaataacc ttcattatac tctgacgatt 2640 cttcaggaat gtcagacatg aaataacgct catcttcttg atctggtcga ggttttccag 2700 acaaaaagtc ttgaagttga atgctaccag attctgatct tcctcaaact caaggtcttt 2760 gccttgtgtc aacaaagcaa caatgctttc cttagtgagc ttaaccttag acatgatgat 2820 tgtagaagtt gttatatgct ttgaccgtat gtaattcaag gtgcgaaagt gcaactctgt 2880 attccgcagt cgtttcttag ggttttaatg tgatgatttg taagactgag tgttaaggtt 2940 tgaataaaat tgacacgatt gctct 2965 //