ID AJ410617; SV 1; linear; genomic RNA; STD; VRL; 6532 BP. XX AC AJ410617; XX DT 27-MAR-2003 (Rel. 75, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 3) XX DE Dobrava virus complete L segment gene for polymerase protein, strain DE DOBV/Ano-Poroia/Afl9/1999) XX KW L segment gene; polymerase protein. XX OS Orthohantavirus dobravaense OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; OC Orthohantavirus. XX RN [1] RP 1-6532 RA Nemirov K.; RT ; RL Submitted (08-MAY-2001) to the INSDC. RL Nemirov K., Department of Virology, University of Helsinki, Haartman RL institute, Haartmaninkatu 3, P.O. Box 21, FIN-00014, FINLAND. XX RN [2] RX DOI; 10.1002/jmv.10304. RX PUBMED; 12526053. RA Nemirov K., Vapalahti O., Papa A., Plyusnina A., Lundkvist A., RA Antoniadis A., Plyusnin A.; RT "Genetic characterization of new Dobrava hantavirus isolate from Greece"; RL J. Med. Virol. 69(3):408-416(2003). XX RN [3] RX DOI; 10.1016/S0168-1702(02)00179-X. RX PUBMED; 12457975. RA Nemirov K., Hentonnen H., Vaheri A., Plyusnin A.; RT "Phylogenetic evidence for host switching in the evolution of hantaviruses RT carried by Apodemus mice"; RL Virus Res. 90(1-2):207-215(2002). XX DR MD5; b0480edaf05009b2b6086fc2de81b34c. DR BioSample; SAMEA3283064. DR EuropePMC; PMC1151903; 15956394. DR EuropePMC; PMC167242; 12885898. DR EuropePMC; PMC1997112; 17711577. DR EuropePMC; PMC2570905; 18394280. DR EuropePMC; PMC2725914; 17554814. XX FH Key Location/Qualifiers FH FT source 1..6532 FT /organism="Orthohantavirus dobravaense" FT /host="Apodemus flavicollis" FT /strain="DOBV/Ano-Poroia/Afl9/1999" FT /mol_type="genomic RNA" FT /country="Greece:Ano-Poroia" FT /db_xref="taxon:3052477" FT CDS 38..6493 FT /gene="L segment" FT /product="polymerase protein" FT /db_xref="GOA:Q806Y6" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR016268" FT /db_xref="InterPro:IPR024378" FT /db_xref="UniProtKB/TrEMBL:Q806Y6" FT /protein_id="CAC85167.1" FT /translation="MEKYREIHRDLQSFPVGSLTAVECIDYLDRLYAIRHDIVDQMIKH FT DWSDNKDSEESIGKVLLFAGVPNNVITAMEKKIIPDHPSGKTLRSFFKMTPDNYKITGS FT TIEFVEVTVTVDVDKGIREKRLKYEAGLKYIEQELHNHFLRGDIPQPYKITFQVVSVRT FT DGSNISTQWPSRRNDGVVQYMRLVQAEISYVREHLIRQEERAALEAMFNLKFNISNIKN FT QPYYIPDYRGIPLIHPNINDLVVYMRDWLSKSHKFSFHEGKVPAVFDCFNENELEHAVK FT YPISRHPRNFLLIQCSLLSSYNPATILSDQVDSRRACNSVLNLIPETPTSFLIHDMAYR FT YINLTREDMVSFYAPKTQFIPTQNVKEPGTFKLTANSMRPESKAMLDMLGSHEPGEKKG FT ALIESLNLSSHIVQSECVSLITKILSDLELNISEPTSHGSFTTKHTYVDNVLEKFFQNE FT IQRYLLDVLKKTTAWHIGHLIRDITESLIAHSGLKRSKYWSVHAYNNGNVILFILPSKS FT LEVAGSYIRFVTVFRMGPGLVDKDNLDTILTDQDVTWGVSKVMSIDLNRLLALNIAFEK FT ALIATATWFQYYTEDQGQFPLQHAIRSVFAYHLLLAVCQKMKLCAIFDNLRYLIPAVTS FT LYSGFPSLINKLFERPFKSALEVYVYYNIKSLLVALAQNNKARFYSKVKLLGLTVDQST FT VGASGIYPSFMSRVIYKHYRSLISEVTTCFFLFEKGLHGNMNEEAKIHLETVEWALKFR FT QKEDQYGESMVENGYTIGELNDNQDLVEQQLYCQDAVELAAVELNKILSTKSQVVANSI FT LNKYWEVPYFSQTRNISLKGMSGQVQEDGHLAASVTIIEAIRYLSSSQNNPSVLQLYEE FT TRKVKAQARIVRKYQRTEADRGFFITTLPTRCRLEIIEDYYDAISKNVAEEYISYGGER FT KILCIQSALEKALRWASGESFIELSNGKFIRMKRKLMYVSADATKWSPGDNSAKFRRFT FT AALHNGLPDDRLKNCVIDALRNVYKTDFYMSRKLRAYIDNMNGHEPAVKNFLEFFPDGH FT CGEVRGNWLQGNLNKCSSLFGVGMSLLFKQLWNELFPELDCFFEFAHHSDDALFIYGYL FT EPIDDGTDWFLYVSQQIQAGHLHWFSVNTEMWKSMFNLHEHVLLLGSIKISPKKTTLSP FT TNAEFLSTFFESCAVSIPFIKILLGSLSDLPGLGYFDDLAAAQSRCVKAMDLGASPQVA FT QLAVALCTNKVERLYGTAVGMIKHPSTYLQVKHGDTPIPLGGSGAMSIMELATAGIGMS FT DKNLLKRALLGYIHKRQKNMAYILGLFKFLMNLSKDTFQHERLGEFSFIGKVQWKIFIP FT KSEFEFFDMYTPKFLKLWSEQHVTYDYIIPKGRDNLLIYLVRKINDPSIVTAMTMQSPL FT QLRFRMQAKQHMKVCKLDDDWVTFREILAAANSFAQLYEVTQEDLDLFQTLTSCTFSKE FT YAWKDFLNGVQCDVIPTKQIQRAKVARTFTVREKDQIIQNSIPAVIGYKFAVTVDEMSD FT VLDSAKFPDSLAVDLKTMKDGVYRELGLDISQAEVMKKVAPMLYKSSKSRVVIVQGNVE FT GTAEAICGYWLRTMSLVKTIRVKPHKEVLKAVSIFNRKEDIGQQKDLAALRLCIEVWRW FT CKANNAPYQEWFHALWFEDKTFSEWLDRFIRVGVPPVDPEIQCAALMIADIRGDLSVLQ FT VQANRRAYSGKQYDAYCVQTYNEETKLYEGDLRVTFNFGLDCARLEIFWDKQTYILETS FT ITQKHVLKIMMDEVTKELLRCGMRFKTEQVSNVKHLVLFKTEAGFEWGKPNIPCIVYKN FT CALRTGLRANQTVNHKFMISIKDNGLRAIAQYDDESPRFLLAHAFHTIRDIRYQAVDAV FT SNVWFIHKGIKLFLNPIISSGLLENFMKNLPAAIPPAAYSLIMNRAKISVDLFMFNDLL FT RLINPSNTLDLSGLQPTEDGFSTVSSMSSRLWSEEVSFVDEDEEIDDEFTIDLQDVDFE FT NIDVEADIEHFLQDESSYTGDLLIMSEETEVKKMRGIIKLLEPVRLIKSWVSKGLCIEK FT VYSPTNIILMTRYLSKNFNFSGRQVSLLDPYDLTEFESIVKGWGECVVDQFSTFDQETQ FT LLVSQKGICPEDVVPDSLFSFRHTIVLLRRLFPQDSVSTFY" XX SQ Sequence 6532 BP; 2130 A; 1107 C; 1344 G; 1951 T; 0 other; tagtagtaga ctccggaaga gacaaactac tataaagatg gaaaaataca gagaaattca 60 tagggatcta caatcctttc cagttgggtc actgacagca gtagagtgta tagactacct 120 ggatcgtctc tatgcaataa ggcatgacat tgttgatcag atgataaagc atgactggtc 180 agataacaag gattcagagg aatctatagg aaaggttttg ctgtttgctg gggtgcctaa 240 taatgttata actgcaatgg aaaaaaagat cattcctgac cacccaagtg gtaaaacact 300 tcgttccttc ttcaagatga cacctgataa ttataagatt acagggtcaa cgattgagtt 360 tgtagaagta acagttactg ttgatgttga caaaggaatc agagagaaaa ggctcaagta 420 tgaggcaggg ctaaagtaca ttgaacaaga actgcataat cattttctta gaggagatat 480 tccacaacct tataagataa catttcaggt tgtctccgtt agaacagatg gttctaatat 540 ctctacacaa tggcctagcc ggaggaatga tggtgttgtt caatacatga ggcttgtaca 600 agctgaaatt agttatgttc gagagcactt gatacggcag gaggaaaggg ctgctctaga 660 agcaatgttc aatctaaaat tcaatataag caacataaaa aatcaaccat attatattcc 720 tgattacaga ggaatcccat taatacatcc aaatattaat gacttagttg tatacatgag 780 ggattggtta tcaaaaagcc ataaattttc atttcatgag ggaaaggtcc ctgctgtgtt 840 tgactgtttt aatgagaatg aacttgagca tgctgttaaa tatcctattt caaggcatcc 900 aaggaacttt ttattgatcc agtgctcact actgtcatcc tacaacccag ctacaatcct 960 ttctgatcag gtcgacagca gacgggcatg taactctgtg ttgaacttga tccctgaaac 1020 accaacctcc ttcttaatac atgatatggc atataggtat atcaatttga caagagaaga 1080 tatggtttca ttttatgcac ccaaaaccca attcataccc acacagaatg taaaagaacc 1140 tggaactttt aagctgactg ctaactcgat gaggcctgag tcaaaggcaa tgttagacat 1200 gttgggtagc catgagcctg gtgaaaagaa aggtgcccta attgagagtt taaacctaag 1260 cagccatata gtacagtctg aatgcgtcag cctgattact aaaatacttt ctgaccttga 1320 gctcaacata agtgaaccca caagtcatgg ctcctttaca actaaacata catatgtaga 1380 taatgttctt gagaagtttt ttcaaaatga aattcaaaga tatttattag atgttctaaa 1440 aaagacaact gcatggcata ttgggcatct cattcgggat ataacagaaa gcttaattgc 1500 tcattcaggt ctcaaaagat caaagtactg gtcagtacat gcatacaaca atgggaatgt 1560 cattttattc atactcccat ctaaatcatt ggaggtagca gggtcttaca taaggtttgt 1620 gacagttttt cgaatgggtc cagggctagt cgataaagac aatctggata caattctgac 1680 tgatcaggat gttacctggg gggtttcaaa ggttatgagt attgatttga acaggttact 1740 agcgctcaat attgcatttg aaaaggcatt aattgctaca gccacatggt ttcaatacta 1800 tacagaggat caaggccagt tccccctaca acatgcaata aggtcagttt ttgcttacca 1860 tttgttgtta gctgtgtgcc agaagatgaa gttgtgtgcc atttttgaca acttacgata 1920 tttaatacct gctgttacat cactttactc tggattcccc tctcttataa ataagttatt 1980 cgagcgcccc tttaagagtg ctctggaagt atatgtttat tataatatta agagtctact 2040 tgtggccctt gcacaaaata acaaggctag attttattca aaagtaaaac ttttaggtct 2100 aacagtagat caatcaactg ttggagcaag tggaatctac ccgtcattca tgtcccgtgt 2160 catttacaag cactaccgta gcttaatatc agaagtaaca acttgtttct ttctgtttga 2220 aaagggttta catggtaaca tgaatgagga agcaaagatt caccttgaaa ctgtggagtg 2280 ggccctaaaa tttaggcaaa aagaagacca atatggagaa tccatggttg aaaatggtta 2340 cacaataggt gaactcaatg ataatcaaga tttagttgaa caacaactat attgtcaaga 2400 tgctgtagaa cttgctgctg tagaacttaa taagatttta tcaacaaaat ctcaggttgt 2460 tgccaatagc attcttaata aatattggga ggttccgtat tttagtcaga ctaggaatat 2520 aagtttaaag gggatgtcag gccaagttca agaagatgga catcttgctg catctgttac 2580 aatcatagag gcaatacgtt atctctcatc ttcacagaac aatccaagtg ttctacaact 2640 ttatgaagag actagaaaag tgaaagctca agcacgaatt gttagaaaat atcagagaac 2700 agaggctgat agaggttttt ttattacaac actcccaaca cgatgtaggt tagaaataat 2760 tgaagattat tacgatgcca tctcaaaaaa tgtggctgaa gagtacatct cctatggtgg 2820 tgaaaggaaa attttatgta ttcaatcagc tttagaaaaa gcacttagat gggcttctgg 2880 agagagcttt attgaactta gcaacggaaa gtttataagg atgaaaagaa aattgatgta 2940 tgtgagtgct gatgcaacga aatggtctcc tggagataac tcagctaaat tcagaagatt 3000 cacagcagct ctacataatg gactacctga tgaccgttta aaaaattgtg taattgatgc 3060 attaaggaat gtttacaaaa ctgacttcta tatgtccagg aaattaaggg cttatataga 3120 taacatgaat gggcatgagc cagctgttaa gaatttcctg gaattcttcc ctgatggtca 3180 ttgtggagaa gtgcggggca attggttgca gggaaatcta aataagtgtt catctctttt 3240 tggtgtagga atgtcgttgc tatttaagca actttggaat gaattattcc ctgaattaga 3300 ctgcttcttt gaatttgctc accactcaga tgatgcgctc tttatatatg gttaccttga 3360 accaattgat gatggaactg attggtttct atatgtgtct caacagatcc aagcaggtca 3420 tttacactgg tttagtgtga acacagaaat gtggaaaagt atgttcaatc tgcatgaaca 3480 cgtacttctc ctaggttcca taaagatatc ccccaagaag acaacactat caccaactaa 3540 tgcggaattc ctctctacgt tctttgaaag ctgtgctgtg tcaataccct ttatcaaaat 3600 attgttaggt tctctatcag atttgcctgg tttaggttac tttgatgacc ttgctgctgc 3660 tcaaagtaga tgtgtcaaag caatggacct tggtgcatca ccacaagttg cccaacttgc 3720 tgttgcacta tgcacaaata aggttgaaag attatatggg acagctgttg gtatgataaa 3780 acatccatca acatatcttc aagtcaagca tggtgataca cctattcctc taggtggaag 3840 tggtgccatg tcaataatgg agctagcaac tgctggtatt ggtatgtctg ataaaaatct 3900 cttaaaaagg gcacttttag gctacataca taaaaggcaa aaaaatatgg catatattct 3960 tggccttttt aaattcttaa tgaacttatc aaaagataca ttccagcatg aaagattggg 4020 tgagttttca ttcataggga aagtgcaatg gaaaatattt ataccgaaat cagagtttga 4080 gttttttgac atgtacacac caaaattctt aaagctatgg agtgaacaac atgttactta 4140 tgattacatt attccaaagg gtagagataa tctattaatc tatcttgtta ggaaaataaa 4200 tgatccaagc atagtcactg ctatgacaat gcaatcacca ctccagttaa gattcagaat 4260 gcaagcaaag caacacatga aagtttgcaa attggatgat gactgggtta catttaggga 4320 gatcttagct gcagcaaata gttttgcaca attgtatgag gtaactcaag aagatcttga 4380 tctttttcag acactaacaa gttgtacatt ttcaaaggaa tatgcatgga aagatttctt 4440 gaatggggtg cagtgtgatg ttattcctac gaagcagatc cagagggcaa aagtggccag 4500 aacattcact gtgagagaaa aagatcagat cattcaaaat agtatcccag ctgtgattgg 4560 gtataaattt gcagtaacag ttgatgaaat gtcagatgtt ttggattctg caaagttccc 4620 tgactctcta gctgtagatc tgaagacaat gaaagatggg gtttataggg aacttgggtt 4680 ggatatctca caggctgaag taatgaagaa ggttgcacct atgctatata agagctcaaa 4740 gtcaagggtt gttattgttc aaggaaatgt ggagggcaca gcagaggcta tctgtggtta 4800 ctggttacgt accatgtccc ttgtgaaaac tattagggtt aaaccgcata aagaagtatt 4860 gaaagctgta tccatcttta acagaaaaga ggatattggg caacaaaaag accttgctgc 4920 attgcgattg tgcatagaag tttggcgctg gtgtaaagca aataatgcac cctatcaaga 4980 atggtttcat gctctgtggt ttgaagacaa aacattttct gagtggcttg atagattcat 5040 ccgtgtcggt gtccctccag tggacccaga gatccagtgt gctgcactaa tgattgcaga 5100 tatcagaggt gatctatctg tcctacaagt acaggcaaat agaagagctt attcaggtaa 5160 acaatatgat gcctattgtg ttcagacata taacgaagaa acaaagctct atgaaggtga 5220 ccttcgagtc acattcaatt ttggactaga ctgtgcccgc cttgaaatat tctgggacaa 5280 acaaacatac atccttgaga cttcaataac acaaaaacat gttttgaaga tcatgatgga 5340 tgaagtaaca aaagagttgt taaggtgtgg aatgaggttt aaaactgaac aagtgtctaa 5400 tgtgaaacac ctagttttgt tcaagacaga ggcaggtttt gagtggggaa agcctaatat 5460 tccttgcatt gtatataaaa actgtgcact acgtacaggt ttaagagcaa accaaactgt 5520 taaccacaaa ttcatgatat caattaagga taacggcctt agagctattg cacaatatga 5580 tgatgaaagt cctcggtttt tacttgcaca tgcatttcat acaataaggg atattagata 5640 ccaggcagta gatgctgtaa gtaatgtgtg gtttatccat aaggggataa aactattcct 5700 taacccaatt atttcatcag gtttattaga aaatttcatg aaaaatttac cagcagcaat 5760 acctcctgct gcatactcat taatcatgaa tagagctaag atatctgttg atctattcat 5820 gttcaatgat ttacttaggc tcatcaaccc atcaaatacg cttgacctat ccggtttgca 5880 gccaactgaa gatgggttta gcactgtaag cagtatgtca agcagattat ggtctgaaga 5940 ggttagtttt gttgatgaag atgaagagat tgatgatgag ttcacaatag acttgcagga 6000 tgtggatttt gaaaacattg atgtggaagc tgatattgaa catttcttac aagatgaaag 6060 ttcatataca ggtgacttac tcattatgtc agaagaaact gaagtcaaga agatgagagg 6120 aattataaaa ctgctagagc ctgttagact tataaaaagc tgggtttcca aaggtttatg 6180 tattgagaag gtatatagcc caaccaatat tatattgatg actagatatc tttcaaaaaa 6240 tttcaatttt tctggtagac aagtttccct tttagaccca tatgacttga ctgagtttga 6300 aagcattgtt aaaggttggg gagaatgtgt tgttgatcag ttcagtacat ttgatcagga 6360 gacacagctt ttggtatctc agaaaggcat ctgcccagag gatgtggtac ctgattccct 6420 tttttcattt aggcatacta tagttctctt acgtagactt tttcctcagg actctgtttc 6480 aactttctac taattgttta tatttatttt cattttccgg agcatactac ta 6532 //