ID   AJ410615; SV 1; linear; genomic RNA; STD; VRL; 1673 BP.
XX
AC   AJ410615;
XX
DT   27-MAR-2003 (Rel. 75, Created)
DT   07-MAR-2015 (Rel. 124, Last updated, Version 3)
XX
DE   Dobrava virus complete S segment gene for nucleocapsid protein, strain
DE   DOBV/Ano-Poroia/Afl9/1999
XX
KW   S segment gene; nucleocapsid protein.
XX
OS   Orthohantavirus dobravaense
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae;
OC   Orthohantavirus.
XX
RN   [1]
RP   1-1673
RA   Nemirov K.;
RT   ;
RL   Submitted (08-MAY-2001) to the INSDC.
RL   Nemirov K., Department of Virology, University of Helsinki, Haartman
RL   institute, Haartmaninkatu 3, P.O. Box 21, FIN-00014, FINLAND.
XX
RN   [2]
RX   DOI; 10.1002/jmv.10304.
RX   PUBMED; 12526053.
RA   Nemirov K., Vapalahti O., Papa A., Plyusnina A., Lundkvist A.,
RA   Antoniadis A., Plyusnin A.;
RT   "Genetic characterization of new Dobrava hantavirus isolate from Greece";
RL   J. Med. Virol. 69(3):408-416(2003).
XX
DR   MD5; 10757b7244dbfb2eda389e09e939c558.
DR   BioSample; SAMEA3283064.
DR   EuropePMC; PMC1151903; 15956394.
DR   EuropePMC; PMC1997112; 17711577.
DR   EuropePMC; PMC2786626; 19828747.
DR   EuropePMC; PMC3373030; 16707066.
DR   EuropePMC; PMC4025565; 24746107.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1673
FT                   /organism="Orthohantavirus dobravaense"
FT                   /host="Apodemus flavicollis"
FT                   /strain="DOBV/Ano-Poroia/Afl9/1999"
FT                   /mol_type="genomic RNA"
FT                   /country="Greece:Ano-Poroia"
FT                   /note="S segment"
FT                   /db_xref="taxon:3052477"
FT   CDS             36..1325
FT                   /gene="S segment"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q805Q9"
FT                   /db_xref="InterPro:IPR002214"
FT                   /db_xref="UniProtKB/TrEMBL:Q805Q9"
FT                   /protein_id="CAC85163.1"
FT                   /translation="MATLEELQKEINNHEGQLVIARQKVKDAEKQYEKDPDDLNKRALS
FT                   DRESIAQSIQGKIDELRRQLADRVAAGKNIGKERDPTGLDPGDHLKEKSMLSYGNVIDL
FT                   NHLDIDEPTGQTADWLSIVVYLTSFVVPILLKALYMLTTRGRQTTKDNKGMRIRFKDDS
FT                   SFEDVNGIRKPKHLFLSMPNAQSSMKADEITPGRFRTAICGLYPAQVKARNLISPVMSV
FT                   IGFLALAKNWTERVEEWLDLPCKLLSEPSPTSLTKGPSTNRDYLNQRQGALAKMETKEA
FT                   QAVRKHAIDAGCNLIDHIDSPSSIWVFAGAPDRCPPTCLFIAGMAELGAFFAVLQDMRN
FT                   TIMASKTIGTSEEKLKKKSSFYQSYLRRTQSMGIQLDQRIIVLFMVDWGKEAVDSFHLG
FT                   DDMDPELRGLAQALIDQKVKEISNQEPLKL"
XX
SQ   Sequence 1673 BP; 509 A; 352 C; 383 G; 429 T; 0 other;
     tagtagtagg ctccctaaaa agcactacac taaagatggc aacattagag gaactccaaa        60
     aagaaatcaa caaccacgag ggccaattgg tgatagccag gcagaaggtg aaagatgcag       120
     aaaagcagta tgaaaaggat cctgacgacc tgaataaaag ggcattgagt gaccgggaaa       180
     gcattgcaca atcaattcag ggaaaaatag atgaattaag gagacagctg gctgatcgtg       240
     tggcagcagg gaaaaacatt ggcaaagaga gggacccaac tggactagac cctggagatc       300
     acctcaaaga gaagtcaatg ctcagttatg gaaatgtcat tgacctcaac catcttgaca       360
     ttgatgaacc tacagggcaa accgcagact ggctgagcat tgtggtctac ctgacatcat       420
     tcgtggttcc aatattgttg aaggctcttt acatgcttac caccagaggg agacaaacta       480
     ctaaagacaa taagggaatg agaattcgat ttaaggatga cagctctttt gaagatgtga       540
     atgggattag aaagccaaag cacctgttct tgtcaatgcc caatgcacaa tctagcatga       600
     aggcagatga gattacacca ggtcggttca ggactgcaat ttgtggacta tacccagccc       660
     aggtgaaggc aaggaactta atcagtcctg tgatgagtgt gattgggttt ttagcccttg       720
     caaagaactg gacagagcgg gttgaggaat ggcttgacct cccgtgcaag ctactatctg       780
     agccatctcc aacgtctttg accaaaggcc catccaccaa tcgtgactac ttgaatcaaa       840
     gacaaggagc gcttgcaaaa atggaaacaa aagaagctca ggctgtgagg aaacatgcca       900
     tagatgctgg ctgcaacctt atcgaccata tagactcacc atcatcaatc tgggtctttg       960
     caggagcacc cgacagatgc cctcctacct gcctgttcat tgcaggcatg gcagagctag      1020
     gtgcattctt tgctgttctc caggatatga ggaacaccat catggcgtca aaaactatcg      1080
     gaacatctga ggagaagcta aagaagaaat catcttttta ccaatcttac ctacggagga      1140
     cacaatctat ggggatacaa ctggaccagc gcatcatcgt gctcttcatg gttgactggg      1200
     gaaaagaggc agttgatagt tttcatcttg gtgatgatat ggatcctgag ctccggggcc      1260
     tggcacaggc attaattgat caaaaagtga aggaaatatc taatcaggaa ccgcttaagc      1320
     tttaattgta tttgttgcat tatcccatgc tttatgtaat cccacgtatg ctgcattaac      1380
     tgcttggact ggaattatta tactactgat tggtgaatgt atttgcacta ggggttgggt      1440
     tgggtgggcc atttatccgt tatgtaatct cagggtggtt taggacgtca ccttaagtga      1500
     cttttttctg tatatatgga tgtagatttc atttgatctg tactaacatc ttatttcctt      1560
     cttttccttt ctttactaac aacaactacc tacctcaaaa caacaacact acctcaacaa      1620
     ctactacctc attgatttgc ttcctgaatg tctctttagg gagtctacta cta             1673
//