ID   AJ409314; SV 1; linear; genomic RNA; STD; VRL; 1807 BP.
XX
AC   AJ409314;
XX
DT   05-FEB-2002 (Rel. 70, Created)
DT   05-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Garlic latent virus genes for TGB2 protein, TCB3 protein, coat protein and
DE   nucleic-acid binding protein, isolate hub: Wuhan, genomic RNA
XX
KW   coat protein; nucleic-acid binding protein; TGB2 protein; TGB3 protein.
XX
OS   Garlic latent virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1807
RA   Adams M.J.;
RT   ;
RL   Submitted (20-MAR-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s705-002-8330-y.
RX   PUBMED; 11890533.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of some carla- and potyviruses from bulb crops in China.
RT   Brief report";
RL   Arch. Virol. 147(2):419-428(2002).
XX
DR   MD5; 4181ddd3456afff196c463ec390352f3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1807
FT                   /organism="Garlic latent virus"
FT                   /host="Allium sativum"
FT                   /isolate="hub: Wuhan"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hubei"
FT                   /db_xref="taxon:12458"
FT   CDS             1..333
FT                   /product="TGB2 protein"
FT                   /db_xref="GOA:Q8UZA4"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZA4"
FT                   /protein_id="CAC84175.1"
FT                   /translation="MPLRPPPDHTKTFFASAVGICIALGLYTLTRSTLPHVGDNIHSLP
FT                   HGGCYQDGTKRIFYNSPARKFPSSNLLSGLSAPLCLLALIIGLICISEKIKPSSSTRIS
FT                   CRCTHS"
FT   CDS             312..506
FT                   /product="TGB3 protein"
FT                   /db_xref="GOA:Q8UZA3"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZA3"
FT                   /protein_id="CAC84176.1"
FT                   /translation="MQVHPFIVLAISLLATLLFCYSLENLRPEKCTVIITGESVKIIGC
FT                   EFTSDFIDFAKQAKPFGSL"
FT   CDS             532..1425
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8UZA2"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZA2"
FT                   /protein_id="CAC84177.1"
FT                   /translation="MTSEEEALSEVRKLPTRDPVSIPESERGKAVNDVGVMEREGFEAV
FT                   LRRSESRFNKLKEKCMSELSSVNVTNCCWESGRPKAQLADNLKGDASNIFTRPSMDALL
FT                   VRNYAPESNNLATAEELAKISAKVQALGAPEECLAEVFWDICMYCTTAGSSPNVNPKGT
FT                   ISVGGKVVTRDMVVAVIKEFSTLRQVCRCYAPVVWNYMLLNEQPPANWDAKGFTENTKY
FT                   AAFDTFDAVTNKAAIQPLEGLIRAPTDAERIAFATHKKLALAKNAQNSRYANTSAEVTG
FT                   GFFGCFPKNNFRENRC"
FT   CDS             1419..1715
FT                   /product="nucleic-acid binding protein"
FT                   /db_xref="GOA:Q8UZA1"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZA1"
FT                   /protein_id="CAC84178.1"
FT                   /translation="MLIKQRTYRRLLRAIFRLHTNKNCVDVIDIIVSKVVCGSAGASSY
FT                   ARARRAKSIGRCPRCYRCSPGFSFTKNCDTKTCVPGISYNDKTKAFIVNGVTM"
XX
SQ   Sequence 1807 BP; 502 A; 371 C; 426 G; 508 T; 0 other;
     atgccactta ggccgccgcc tgatcacact aaaactttct tcgctagtgc tgtcggtatt        60
     tgcattgctc ttggtttata caccttaact cgttcaacgc tgccgcacgt aggagacaat       120
     atacatagtt taccacacgg aggttgctac caagacggta cgaaaagaat cttttataat       180
     agcccagccc ggaaatttcc aagcagcaat ttattgtcgg ggctatccgc accgctgtgc       240
     ttgttagcgc taatcatcgg cctaatttgc attagtgaaa aaataaaacc gagttcaagt       300
     actaggattt catgcaggtg cacccattca tagttttggc gatcagttta ttagcgacac       360
     tgctcttttg ctatagtctt gaaaacctca gacctgaaaa gtgcactgtg ataattaccg       420
     gagaatctgt taaaataatt ggctgtgaat ttacgagcga tttcattgat tttgccaaac       480
     aggctaaacc atttgggtca ctttaggttt acagcgtttg gaattgatat tatgactagc       540
     gaagaagaag ctctcagtga agttcgaaaa ttgcctacgc gtgatccggt gtcaattccg       600
     gagagtgagc gtggtaaagc tgtgaatgat gttggtgtta tggaaagaga aggcttcgag       660
     gccgtgctca gacggagtga gagtaggttc aacaaattga aagagaaatg tatgtccgaa       720
     ttgtcaagcg tgaatgttac gaattgttgt tgggagtctg ggagacccaa ggctcaactt       780
     gccgataatc tcaaaggtga tgcgtcaaac atttttaccc gcccttccat ggacgccctc       840
     cttgtgcgca attacgcgcc agaaagtaat aacctggcga ccgcggagga gttggcaaaa       900
     atctccgcca aggtgcaggc actgggtgcg cctgaagaat gtttggctga ggtcttctgg       960
     gatatttgta tgtattgcac taccgccggt agttctccaa atgtgaatcc caaaggaaca      1020
     atttccgtgg gcggcaaagt tgtgacaaga gatatggtgg tcgctgttat caaagaattt      1080
     tccacacttc gccaagtttg tcgctgttat gcacctgtcg tttggaatta catgttgcta      1140
     aatgagcaac cgccagcaaa ttgggatgcc aagggcttta cagaaaatac aaaatatgcc      1200
     gctttcgaca cctttgacgc cgttacgaat aaagcagcaa tccaacctct tgaagggctc      1260
     ataagagcac ctactgatgc tgaacgcatc gcttttgcaa cgcataagaa gttggctttg      1320
     gctaagaatg ctcaaaattc tcgttatgcc aatacctctg ccgaggtcac tggcggcttc      1380
     ttcggctgtt tccctaagaa caatttccgt gagaatcgat gttgatcaag cagagaacgt      1440
     atcgtagatt actgcgtgct atatttagat tgcatactaa taagaattgc gtggatgtga      1500
     tagacatcat tgtgagtaaa gtagtgtgtg gaagtgcagg tgcttcatcc tatgctcgcg      1560
     ctcgtagagc aaagagcatc gggcggtgcc ctcgctgtta tcggtgttcg ccaggtttta      1620
     gttttactaa aaactgtgac accaaaactt gtgttcccgg cattagctat aatgataaaa      1680
     ccaaggcgtt tatagttaat ggtgtaacca tgtgaaacct tactataagc cttgaatgtt      1740
     gcccataaaa cctaaataat gtataagtgg gaacgtataa aataatttgt ttttaaaata      1800
     ttttcgc                                                                1807
//