ID   AJ409312; SV 1; linear; genomic RNA; STD; VRL; 1618 BP.
XX
AC   AJ409312;
XX
DT   05-FEB-2002 (Rel. 70, Created)
DT   05-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Onion yellow dwarf virus partial gene for polyprotein, isolate yn1: Yunnan,
DE   genomic RNA
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1618
RA   Adams M.J.;
RT   ;
RL   Submitted (20-MAR-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s705-002-8330-y.
RX   PUBMED; 11890533.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of some carla- and potyviruses from bulb crops in China.
RT   Brief report";
RL   Arch. Virol. 147(2):419-428(2002).
XX
DR   MD5; 06d391f16a9c350208c4eb45b06a29bb.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1618
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum"
FT                   /isolate="yn1: Yunnan"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yunnan"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1410
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q8UZ21"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZ21"
FT                   /protein_id="CAC84173.1"
FT                   /translation="GNNSGQPSTVVDNTIMVMLSVQYALRKCGIGLDKQTEVIKYFCNG
FT                   DDLLIAIHPEYESILDKFQQYFQELGLDYDFSSRSKSKEDVYFMSHRGLLRDGIYIPKL
FT                   DRERVVSILEWDRADKPEHRLEAICASMIEAWGYPDLLHEIRKFYQWLLEQAPYNVIAL
FT                   NGKAPYIAETALRKLFTDIDASEGELEKYYELYMSLENDEAIPKEVRYQAGEGEDAAAQ
FT                   SSTSQQVAKQKDKDVDTGTTGKFAIPRIKALSDKMRFPKVGKTVVLNAEHLLAYKPEQI
FT                   ELYNTRSTKQQFENWYNAIKKEYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDG
FT                   EEQVEYPLAPIVDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGIQRNLTELSLA
FT                   RYAFDFYEMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADIN
FT                   KNQHTLLGIKM"
FT   mat_peptide     <1..636
FT                   /product="NIb protein"
FT   mat_peptide     637..1407
FT                   /product="coat protein"
FT   3'UTR           1411..1618
XX
SQ   Sequence 1618 BP; 547 A; 273 C; 378 G; 420 T; 0 other;
     gggaataata gtgggcagcc atctaccgtt gtcgataaca caatcatggt tatgctaagt        60
     gtacaatacg ccttgcggaa atgtggcata ggattggata aacagactga ggttattaaa       120
     tacttttgca atggtgatga tctattgatc gcaatacatc cagaatacga aagcatactt       180
     gacaaatttc aacagtattt tcaggaactt ggcttagatt atgacttttc aagtaggagc       240
     aaatcaaagg aagatgtgta ttttatgtcc catagaggat tactcagaga cgggatttat       300
     ataccaaagt tggacagaga acgtgttgta tcaatacttg aatgggatcg agctgataaa       360
     cctgaacata ggttggaagc catatgtgca tctatgatcg aggcatgggg ttatccagac       420
     cttctacatg aaattcgtaa gttttaccaa tggctcctag aacaagctcc gtataatgtg       480
     atagctctga acggaaaagc accctatata gcggaaacag ctcttagaaa gttgtttact       540
     gatattgatg cgagtgaggg ggagttagag aaatattacg aattatatat gagtctcgag       600
     aatgacgaag caattccgaa ggaagttcgt taccaggcag gggaaggaga agacgcagca       660
     gcacaatcaa gtacgtcaca acaagttgca aagcaaaagg ataaagacgt tgacactggc       720
     accactggta agtttgcaat tcctagaatc aaggcgctct ctgacaaaat gagatttcca       780
     aaagttggta aaactgttgt actcaatgca gaacacttgc tggcatataa accagaacaa       840
     attgaattgt acaatacaag atcaacaaaa cagcagtttg agaactggta taacgcaata       900
     aagaaggaat acgatgttaa tgatgagcaa atgaagatat tgctgaatgg cttaatggtt       960
     tggtgcattg agaatggaac atctcctaat ttatcaggaa attggactat gatggacggc      1020
     gaagaacaag ttgagtatcc actggcgcca atcgtggaca atgcaaaacc aacatttaga      1080
     cagataatgg cgcatttcag tgatgcagct gaagcataca ttgaatatag aaacgccacg      1140
     gaaaaataca tgccccggta tggaattcag cgaaacttaa cagaacttag tttggcacgt      1200
     tacgcatttg atttttatga gatgacttcg aaaactccca aacgagcaaa agaagcgcac      1260
     atgcaaatga aggcggctgc ggttagaggg gcaactaacc gtttgtttgg cttggatggt      1320
     aacgtcaaca caacagaaga ggacacggaa agacacacgg ctgcggatat taacaagaac      1380
     cagcacacgt tgctcggtat taaaatgtga agccatgttg tgtttttagc tttatatata      1440
     tatcgttata taaggacgta tgtaatatgt aatccttttc atttcgttta atctgacttc      1500
     gagcaacgaa atgtggtgta ccactagttg tggcgaacga tatggttaaa catctgtgat      1560
     taatgtcgaa cttcatgaga gtgacgtatc acgaggtgga ttttgatgtg aattacgg        1618
//