ID   AJ409311; SV 1; linear; genomic RNA; STD; VRL; 1619 BP.
XX
AC   AJ409311;
XX
DT   05-FEB-2002 (Rel. 70, Created)
DT   05-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Onion yellow dwarf virus partial gene for polyprotein, isolate sd:
DE   Jinxiang, genomic RNA
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1619
RA   Adams M.J.;
RT   ;
RL   Submitted (20-MAR-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s705-002-8330-y.
RX   PUBMED; 11890533.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of some carla- and potyviruses from bulb crops in China.
RT   Brief report";
RL   Arch. Virol. 147(2):419-428(2002).
XX
DR   MD5; f5007b8a62a8cc2c85e84b55437eb94a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1619
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="Allium sativum"
FT                   /isolate="sd: Jinxiang"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shandong"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1410
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q8UZ22"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZ22"
FT                   /protein_id="CAC84172.1"
FT                   /translation="GNNSGQPSTVVDNTIMVMLSVQYALRKCGIETSKQSEIIKYFCNG
FT                   DDLLIAIHPDYENILEQFKQYFHELGLDYDFSSRSKSKEDVYFMSHRGILKDGIYIPKL
FT                   DKERVVSILEWDRADKPEHRMEAICASMIEAWGYPDLVHEIRKFYQWLLEQAPYNVIAQ
FT                   SGKAPYIAETALRKLFTDVDASEAELEKYYDMYMELDNEETISKEVRYQAGDGEDAAAQ
FT                   SSATKQIARQKDKDVDAGTTGKFAVPKIKVLSDKMRFPRVGRNVVLNAEHLLAYKPEQV
FT                   TLYNTRSTQQQFEAWYTAVKKEYDVTDDQMKILLDGLMVWCIENGTSPNLTGNWTMMDG
FT                   DEQVEYPLAPILDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLA
FT                   RYAFDFYEMTSKTPKRAKEAYMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADIN
FT                   KNQHTLLGIKM"
FT   mat_peptide     <1..636
FT                   /product="NIb protein"
FT   mat_peptide     637..1407
FT                   /product="coat protein"
FT   3'UTR           1411..1619
XX
SQ   Sequence 1619 BP; 560 A; 275 C; 372 G; 412 T; 0 other;
     gggaataata gtgggcagcc gtccacagtt gtcgacaaca caataatggt gatgcttagt        60
     gtccaatacg ctttgaggaa atgtggcatt gaaacaagta aacaaagtga aattattaaa       120
     tacttttgca atggcgatga cttattaata gccatacatc cagattatga gaatatactt       180
     gaacagttta aacaatattt tcatgagctt ggattggatt atgatttctc aagtagaagt       240
     aaatcgaaag aagatgttta ctttatgtca catagaggga tcctcaaaga tggcatttac       300
     atcccaaaat tggataaaga gcgtgttgta tcgatactag agtgggatcg tgcggacaaa       360
     cccgaacata gaatggaagc tatatgtgca tctatgattg aagcttgggg ctatcctgat       420
     cttgttcacg aaatccggaa attttatcag tggttattag aacaagctcc ttacaatgta       480
     atagcccaaa gtggaaaagc accttatata gcggaaacag ctcttaggaa gttgtttact       540
     gatgttgatg caagcgaagc tgaattagaa aaatattatg atatgtatat ggagcttgac       600
     aatgaggaaa caatttcgaa agaagttagg taccaagctg gagacgggga agacgcagca       660
     gcacaatcaa gcgcaacgaa gcaaattgcg aggcaaaaag ataaagatgt tgacgctggc       720
     acaaccggca aatttgcagt gcctaaaatc aaggtgctat ctgataagat gcgatttcca       780
     agagttggga gaaatgtagt actaaacgcc gagcatttat tagcatacaa gccagaacaa       840
     gtcacattgt acaatacaag atcgacgcag caacaattcg aagcttggta cacagcagtt       900
     aagaaagagt atgatgtcac agacgaccaa atgaaaattt tactagatgg tttgatggtt       960
     tggtgcatcg aaaatggaac ttctccaaat ctcacaggaa attggacgat gatggatggt      1020
     gatgagcaag ttgagtatcc attagcacca atactagaca atgcaaaacc aacatttaga      1080
     caaataatgg cgcatttcag tgatgcagct gaagcataca ttgaatatcg aaacgccaca      1140
     gaaaaataca tgccccggta tggacttcag cgaaacctaa cagaattaag tttagcacgt      1200
     tacgcattcg acttttatga aatgacttca aaaactccta aacgagctaa ggaagcatac      1260
     atgcaaatga aggcggcagc ggttagaggg gcaactaacc gtttgtttgg cctggatggt      1320
     aacgtaaaca caaccgaaga ggacacggaa aggcacacag cagcggatat aaataagaac      1380
     cagcacacgt tgcttggtat taagatgtaa atctgcggtg atgtctttag ctttatgtat      1440
     gaatatataa ggacgtatgt aatatgtaat ccttttcatt tcgtttaacc tgacttcgag      1500
     caacgaaatg tggtgtacca ccagttgtgg cgaacgatac ggttagatat tcgtgattaa      1560
     tgttgagctt catgagagtg atgtatcacg aggtgaatct tggcgtgcat tacgaagac       1619
//