ID   AJ409304; SV 1; linear; genomic RNA; STD; VRL; 2082 BP.
XX
AC   AJ409304;
XX
DT   05-FEB-2002 (Rel. 70, Created)
DT   05-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Leek yellow stripe potyvirus partial gene for polyprotein, isolate hub:
DE   Wuhan, genomic RNA
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Leek yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2082
RA   Adams M.J.;
RT   ;
RL   Submitted (20-MAR-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s705-002-8330-y.
RX   PUBMED; 11890533.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of some carla- and potyviruses from bulb crops in China.
RT   Brief report";
RL   Arch. Virol. 147(2):419-428(2002).
XX
DR   MD5; 72abe557831948a1582d1dc5e4d0ed62.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2082
FT                   /organism="Leek yellow stripe virus"
FT                   /host="Allium sativum"
FT                   /isolate="hub: Wuhan"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Hubei"
FT                   /db_xref="taxon:42004"
FT   CDS             <1..1488
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:Q8UZ36"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZ36"
FT                   /protein_id="CAC84165.1"
FT                   /translation="GNNSGQPSTVVDNSLMVVFSMYYAMEMSNIEDIHNKCVFFVNGDD
FT                   LLIAVEPGSELFLDSLQNLFQQLGLNYNFDSRTRNKEELCFMSHMGILQDGIYIPKLDK
FT                   ERVVSILEWDRAQQPEHRLEAICAAMIEAWGYPDLLDRIRKFYCWVLEQAPFSELSAVG
FT                   KAPFISEMALRNLYTDYKATEVELARYLELYDSDTTAEDIFEYQAGEELDAGTQASKNA
FT                   RSSADKSIEQRNPTPPQTSISGRKDGENSDSNSNKDRDVNVGTTGTFSVPRIKQITQKG
FT                   LSIPMDGGKSVLNLDHLLQYKPSQICISNTRATRAQFNTWKSKLQDEYGVSNSEMSIIL
FT                   NGLVVWCIENGTSPNINGVWTMMDGEEQVEFPLRPVVEHAQPTLRQIMTHFSALAEAYI
FT                   EMRNSEQAYMPRYGLQRNLTDMSLARYAFDFYEVTSRTPVRAREAHAQMKAAALRNSRP
FT                   RLFGLDGNVTTMDEDTERHTAHDVNARMHHLDGAHMQ"
FT   mat_peptide     <1..621
FT                   /product="NIb protein"
FT   mat_peptide     622..1485
FT                   /product="coat protein"
FT   3'UTR           1489..2082
XX
SQ   Sequence 2082 BP; 638 A; 409 C; 496 G; 539 T; 0 other;
     gggaataata gcgggcagcc atccaccgtt gtggataact cacttatggt tgtgttttct        60
     atgtactacg ctatggaaat gagcaacata gaggatatcc acaataagtg cgtcttcttc       120
     gtgaacggtg atgatttact aattgcagtt gagccaggct ccgaactttt cttggacagt       180
     ttgcaaaact tgtttcagca actcggtcta aattataatt ttgatagtcg aacgcgtaac       240
     aaagaggagt tatgttttat gtcgcacatg gggattctac aagatggtat ctatatacca       300
     aagttggata aggagcgtgt agtatcaata ctggagtggg atcgtgccca acaacctgag       360
     cacaggttag aagccatatg tgcagcaatg attgaagcgt ggggttatcc agaccttcta       420
     gaccgaattc gtaaattcta ttgttgggtt cttgagcaag caccgtttag tgagttgagt       480
     gctgttggaa aagcaccttt tatctctgag atggccttgc gtaatttgta cactgactat       540
     aaggccacag aggttgagtt agcaaggtat cttgagctgt atgatagcga cacaacggca       600
     gaggacatct ttgagtacca agcaggtgaa gagctagatg caggcacaca agcgagcaag       660
     aacgcaagga gtagcgcaga caagtctata gagcaacgaa atccaacacc accacaaact       720
     agtataagtg ggaggaaaga tggtgaaaat tcggactcaa attcaaataa ggacagagat       780
     gtgaatgtag gcaccacagg aactttcagt gtgccaagga taaaacaaat tacacaaaaa       840
     ggtctatcaa ttccaatgga cggagggaag tcagtgctca atttggatca cctcctacaa       900
     tacaagccta gtcaaatatg tatatcaaac actagagcca ctagagcaca atttaacact       960
     tggaaatcca aactacagga cgaatatggg gtttctaata gtgagatgag catcattctg      1020
     aatggtttag tagtgtggtg tattgagaat ggcacatcac caaacataaa tggagtctgg      1080
     acaatgatgg atggcgagga gcaagtcgaa ttccctctgc gaccagttgt tgagcacgca      1140
     cagccaaccc tacgacaaat aatgacacac ttctcagcac ttgcagaggc atatattgag      1200
     atgagaaatt cggaacaggc ttacatgcca agatatggtt tacagagaaa tcttacagac      1260
     atgagtctcg cacggtatgc atttgacttc tatgaagtta catcaagaac accagttaga      1320
     gcgcgcgagg ctcacgcaca aatgaaagca gcagccttac ggaattcaag gccaaggctg      1380
     tttggactag acggtaacgt cacgacgatg gatgaggaca cggagaggca cacagcacat      1440
     gacgtgaatg cacggatgca ccatctcgat ggtgcgcata tgcagtgatg tttcggttta      1500
     taaccggtta tggacttcca cttaaaaagt ctcgagtgcc aaacttgtat tttggctagc      1560
     ttagtgaagc tacaattcac tcgttcaagg cagtttctac tctaaggatg acttgagaat      1620
     taatagctct caatgccggc cacagtggtg gctaccaaga tccaacactt ggtttgaagt      1680
     tgatcaactg aagatctatc ctaagtacgg ttttgtaaag aaggtgagtc caattgttaa      1740
     ggatagtaag tctgaagcct ttatggtgta tacgcagcct gaattttgat accccacctt      1800
     taccctacga tggagtgcta ctttaaagac tagctaggat tgagaccgaa ttctcatgtg      1860
     ctggcatggc cagcggctaa tcacctaatg attggttgac caccttatag tcaatttgga      1920
     aacccgtagt atcctatcct tgcctaatat cgtaagtttt atctactggt gtagcgtggg      1980
     acaaccacct tataaacact ttgaatatta ggatcgagct gttcattcga agacactaag      2040
     agtggttaac catgtgtgtg ttcttatgtt gcagtaagag ac                         2082
//