ID AJ409148; SV 1; linear; genomic RNA; STD; VRL; 2645 BP. XX AC AJ409148; XX DT 14-DEC-2001 (Rel. 70, Created) DT 14-DEC-2001 (Rel. 70, Last updated, Version 1) XX DE Rice black streaked dwarf virus gene for P6 protein (ORF6), genomic RNA XX KW ORF6. XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-2645 RA Adams M.J.; RT ; RL Submitted (08-MAR-2001) to the INSDC. RL Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts RL AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1007/s007050170006. RX PUBMED; 11811683. RA Zhang H., Chen J., Adams M.J.; RT "Molecular characterisation of segments 1 to 6 of Rice black-streaked dwarf RT virus from China provides the complete genome"; RL Arch. Virol. 146(12):2331-2339(2001). XX DR MD5; 0f040378163281dfb5f3d741fb7f9a9a. XX FH Key Location/Qualifiers FH FT source 1..2645 FT /organism="Rice black streaked dwarf virus" FT /chromosome="S6" FT /host="Oryza sativa" FT /mol_type="genomic RNA" FT /country="China:Zhejiang" FT /db_xref="taxon:10990" FT 5'UTR 1..81 FT CDS 82..2460 FT /product="P6 protein" FT /function="unknown" FT /note="ORF6" FT /db_xref="UniProtKB/TrEMBL:Q8UZ03" FT /protein_id="CAC84076.1" FT /translation="MSAHLTNLALLKKRIQRRNNTEQAKDEPKESPPIHPIEKPLESSV FT TSESSNSKKRYARPSNKASPQPNSSESSNETKLLHNLISSASNSSVVMKPNSDVLNLSK FT TQTILPSLVVNATCQLRMKNLDNWKGFVLCHPSSPQANVSATLYTGNKLFVVFEKKNVL FT NDDSEFNLMLKERVFTYLDAATFKPKNKDFMVSLYNAPSNILIVDSDLEFDDLSNAKIC FT FSSTEMSGLTSLHKRMIKFSFWPSNILMPHLSELSNYFNDFKLRHLKDIEIEASDVQSS FT LFIVSNNKFSEQSENVLQFIDAQPNSQLLVNKINDMSERFSAMPDGTHFMIGTVPAQSE FT FIDDKKKNLFGSNQVVLMVNPVNVLFDHKQLYSLLFSYLNKFVMQASIVQVFTTDLINH FT ADLFSIAFSTIKCFYDSVSCTLINHVLDSNYQNENKVLLSVNDLTDEVADFIPSSVEIV FT SDNETDVKRVENEIKSLINFETHQQAPSTSQSLENRATQQSWVDVIEKSNSSNEKEPSN FT TFQSVIDKMSYEDFLTNVKLVEFAKRYSAETDDLHRATVDLARMSEENGQLQVSLRQAK FT EQIAKYETEIAGIIKQRDCFDLQITELNDAYCSLLKEKDEIKIENEMLKEQLKEANHVV FT VERTSRLNEVIDELENIKTSANETNDESDDEQQESNGFRLFGECIDKVRALKEKYPHLY FT SGVDANFGDITSLLKMIMIKIDSIMSLCDADVTVSENQWNAYGLCSLAPTSDDDTNFPM FT LSAKQVGLINVQITNFTNVVYDAFFYNLFIKFLWQLSSE" FT 3'UTR 2461..2645 XX SQ Sequence 2645 BP; 834 A; 541 C; 474 G; 796 T; 0 other; aagttttttg agtctgagat actgttaccc attgcgaccc tgagaacgag ttcaacagaa 60 tctcacgccc aaaaaacaac gatgtctgcc cacctgacca atttagccct tctgaaaaaa 120 cgaatccaaa gacgaaacaa caccgagcaa gcgaaagatg aaccaaaaga aagcccgccg 180 atccacccga tcgaaaagcc tctcgaatca tccgtcactt ctgagtcttc taattcgaaa 240 aaacgctacg cacgtccatc taacaaagct tctcctcaac ctaactcttc cgaatcatct 300 aatgagacta aactgcttca caatttgatt tcttctgctt caaattcctc cgtggtgatg 360 aaacctaatt cagacgtact caacctgtct aaaactcaaa ctatccttcc ttctttagtt 420 gtgaatgcca cttgccagtt acgaatgaaa aatctcgata attggaaagg ttttgtcctc 480 tgtcatccta gttctccgca agccaacgtt tctgctactt tgtacactgg taataaactg 540 tttgttgtgt ttgaaaagaa aaacgtatta aacgatgatt ctgaattcaa tctgatgctg 600 aaggaacgcg tattcaccta tcttgatgct gccactttca aacccaaaaa caaagatttc 660 atggtctcat tgtacaacgc tccttctaac atcctcattg tagacagtga tttggaattt 720 gatgacctga gcaacgctaa aatctgtttt tcttccactg aaatgtctgg attaacctcg 780 ttgcacaaga gaatgattaa gtttagtttc tggccaagca acattctgat gcctcatttg 840 tctgaacttt caaattattt caatgatttc aaacttcgtc accttaaaga tatcgaaatt 900 gaagcttctg atgttcagtc ttcattgttc attgtgtcca ataataagtt ttccgaacaa 960 agtgaaaacg tgctccaatt tattgacgcg caaccaaact ctcaactact tgtcaacaaa 1020 atcaacgata tgagtgaaag atttagtgca atgcctgacg gtactcattt tatgattgga 1080 actgtccctg ctcaatcgga attcattgat gacaagaaga aaaacctttt tggatcgaat 1140 caagtggtat tgatggttaa tcctgtgaat gttctgtttg atcacaaaca actgtattcc 1200 ctgctttttt cgtatttaaa caaatttgtc atgcaagcat caattgttca agtattcacc 1260 accgatttga tcaatcatgc cgatctgttc tccattgctt ttagcaccat caagtgcttc 1320 tatgattctg taagctgcac acttatcaat cacgttcttg attccaatta tcaaaatgaa 1380 aataaagttt tattgtccgt gaatgatcta actgacgaag tagctgattt tatcccatcg 1440 agtgtcgaaa ttgtaagtga caatgaaacg gatgttaagc gtgttgaaaa cgagatcaaa 1500 tctttgatca atttcgaaac tcatcagcaa gcgccatcta cgtcccaatc tttagaaaat 1560 cgtgctactc agcagtcttg ggttgatgta attgagaaga gcaattcgtc taatgaaaaa 1620 gaaccatcta acacatttca gtccgtgatt gacaaaatgt catatgaaga ttttctcact 1680 aatgtcaaac ttgttgaatt tgcaaagcgt tactctgctg aaactgatga tttacacaga 1740 gcaactgtcg atttagctcg tatgtcggaa gagaacggtc aactacaggt atccttgaga 1800 caagctaaag aacagattgc caaatacgaa acagaaatag cgggtattat caagcaaaga 1860 gactgttttg accttcagat aacagagttg aacgacgcgt actgctcttt actgaaagag 1920 aaggacgaaa tcaaaattga gaacgaaatg ttgaaggaac agttgaaaga agcgaatcat 1980 gttgttgtcg aacgaacctc ccgtcttaac gaagttatcg atgaattaga aaatattaaa 2040 acatctgcta atgaaacgaa tgatgaatcc gatgatgaac aacaagaaag taatggattt 2100 agactgtttg gtgaatgcat tgacaaagta cgtgccttga aagaaaagta tcctcatttg 2160 tattcaggag tagatgctaa ttttggagat atcacttcct tgctgaaaat gatcatgatc 2220 aagattgata gtatcatgtc tctttgtgat gcagacgtta ctgtttctga aaatcaatgg 2280 aacgcttatg gtttgtgtag tttggcccca acttctgatg atgacaccaa tttccctatg 2340 ctatccgcta aacaagttgg tttgattaat gtgcaaatca ctaatttcac gaacgtggtg 2400 tacgacgctt tcttttacaa tctgttcatc aaattcctct ggcaactaag ctctgagtaa 2460 atgaatcatt cttatgattg acatctcgca ttaacatctg cgtattaaca actagctgat 2520 ttgagtaata tgaattccaa ccggaaagag atctcgtgtt gaattggatt atcggcaatc 2580 gtaatggtaa gtcagttttc tctttcgtca ccttgcccgg caagagactc aaatcagctg 2640 atgtc 2645 //