ID AJ409147; SV 1; linear; genomic RNA; STD; VRL; 3164 BP. XX AC AJ409147; XX DT 14-DEC-2001 (Rel. 70, Created) DT 14-DEC-2001 (Rel. 70, Last updated, Version 1) XX DE Rice black streaked dwarf virus gene for P5 protein (ORF5), genomic RNA XX KW ORF5. XX OS Rice black streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3164 RA Adams M.J.; RT ; RL Submitted (08-MAR-2001) to the INSDC. RL Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts RL AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1007/s007050170006. RX PUBMED; 11811683. RA Zhang H., Chen J., Adams M.J.; RT "Molecular characterisation of segments 1 to 6 of Rice black-streaked dwarf RT virus from China provides the complete genome"; RL Arch. Virol. 146(12):2331-2339(2001). XX DR MD5; a9510df1fe462a75bd7ac9d347598663. DR EuropePMC; PMC2666654; 19292925. XX FH Key Location/Qualifiers FH FT source 1..3164 FT /organism="Rice black streaked dwarf virus" FT /chromosome="S5" FT /host="Oryza sativa" FT /mol_type="genomic RNA" FT /country="China:Zhejiang" FT /db_xref="taxon:10990" FT 5'UTR 1..15 FT CDS 16..2829 FT /product="P5 protein" FT /function="unknown" FT /note="ORF5" FT /db_xref="GOA:Q8UZ04" FT /db_xref="UniProtKB/TrEMBL:Q8UZ04" FT /protein_id="CAC84075.1" FT /translation="MTYSKVKMTTDPSEMSLKKVLFDPTNEIRILNHEQADNTLLTTMM FT IVHEFSDLTTRDSVVPQIAEMAKNEINQTIDSIVDSVSTAFVDHYHEIIDKNAKLGNPL FT SPNFKNVISINTCIPGLETLYVEREKWELLNRLYRLNKKLSQKYPLDDLLKGHFPDIST FT GDESTDEYISTIIIILEVFVGMLTINSVYGGAIFSVLILMSDHSSYLFIMCLLLHAIVQ FT AVKIYLGKRESEVSEGKPSYVDKVKNDDVKDALINDTMFIFANTTKEDISQFFDVSFKV FT HTRKSSEQHPFRSRFISMLTKITKIQGIKEEVKFVGYLDGISKDELVGASGKKLSASQR FT HAIGTKYDDKTQTLIISHPILKDAFSRLEQLGFLKDGLLSKDDFLKIPIDFTTINFDKM FT ETLCSYVTPFAINADLRHASQMSYNWKSLTTEKRPYQFLKEGMSVNFYDPIFECFFPNH FT FIKAVKKDAIAIDPEQIVGYEELENFATLVEKHDDYSYNRTDAYSILKFLHEGHHSCGC FT AEYFAGFISDYLTSIEVLNHIKDSKLSKLDYHLKQEYESLLKKARRQDVLRMPVSEHAD FT YFARCAYNESFFDIDFCFLTDGECHSLVVRFTKRKPYFRFKDDKLDKLNVLSLYDLVVN FT CNHGELSSASRVGWNLVDLDSMGSDENIGRITRKPSSKTRQFTYDLMMVNFHGSVTQYV FT IPEWLGESITLYEEKHEGAALFGRSSLFSTMSCLAIHLISNYKLIKCFENSSNKLVSFM FT DGIISAMSTNIEFSPFKNTVLNNLKKCTQTIDYSNAKNSISPSSSRSKSFRSYLRSSRP FT NHIYDKISACIAKKQNGMFSSEEMCMPYTLRKFGRLGIDDDDCELSDAISSREELYNNH FT PCALRLRNIGHFVFGKHFRCKACRNNYGTSFELSLCQLGHQETAIETVRSNTITSQSRT FT KLQPSAT" FT 3'UTR 2830..3164 XX SQ Sequence 3164 BP; 1013 A; 617 C; 572 G; 962 T; 0 other; aagttttttt cactcatgac atattcgaaa gtgaagatga ccacagatcc ttccgaaatg 60 tctctgaaaa aagtgctctt cgacccaacc aacgaaatta gaattctcaa ccacgaacaa 120 gccgataaca cactacttac cacaatgatg atcgttcacg aattctccga cctaacgacc 180 cgcgactcag tagtccctca aattgctgaa atggcaaaaa atgaaattaa ccaaacaatt 240 gactcgatcg ttgattcagt cagtactgcg tttgttgacc attaccatga aatcattgac 300 aagaatgcta agttgggaaa tcctctttct ccaaatttca aaaatgttat atctataaac 360 acatgtatcc ctggtctaga aactttgtac gttgaacgtg agaaatggga attactcaat 420 cgtttgtatc gattaaacaa aaagttaagc caaaaatatc ctttggatga tctgcttaaa 480 ggacattttc ctgacatttc aacaggtgac gaatccacgg atgagtacat ttcaactata 540 atcattattc ttgaagtttt tgttggcatg cttactatta atagtgttta cggtggtgca 600 attttcagtg ttcttattct catgtcagat cattcaagct atcttttcat catgtgttta 660 cttttgcatg caatagttca agctgtcaaa atttatctag gcaaacgaga gtcagaagtt 720 agtgaaggaa agccttccta cgttgataaa gtcaaaaacg acgatgttaa agatgctttg 780 attaatgaca ccatgtttat tttcgctaat actacaaaag aagatatttc tcagtttttc 840 gacgtttcat ttaaagtgca cacccgtaag tcttcagaac aacatccctt tcgctctaga 900 tttatttcaa tgttgaccaa aattaccaag attcaaggaa ttaaagagga agtaaagttt 960 gttggatatt tggacggtat aagcaaagac gaattagttg gtgcttcagg caaaaagttg 1020 tcagcttcgc aaagacatgc tattggaacg aaatacgacg acaagactca aactttaatt 1080 attagtcatc cgatattgaa agatgctttt tctagactag aacaactagg cttcctgaaa 1140 gatggacttc tgtctaaaga tgattttttg aagataccaa ttgattttac gactatcaat 1200 tttgataaga tggaaacttt gtgtagttat gtcactcctt ttgctatcaa tgccgatctt 1260 agacatgctt cacaaatgtc ttataattgg aaaagtctca ctactgaaaa acgtccctat 1320 caatttctaa aagaaggaat gagcgtaaac ttctacgatc ctatctttga atgctttttt 1380 ccaaatcatt tcattaaagc agtcaaaaaa gacgccattg caattgaccc tgaacagata 1440 gttggatacg aagaacttga aaattttgca acgcttgtag aaaaacacga tgattattct 1500 tacaatagaa ctgacgctta ctccattttg aaatttttac atgaaggaca tcacagctgt 1560 ggctgcgcag aatactttgc tggttttatc tcagattacc taacctcgat tgaagtgcta 1620 aaccacatta aggattccaa actgtcaaaa ctcgactatc atttaaagca agaatacgag 1680 tcactactta agaaagcacg acgtcaagat gttcttagaa tgccagtatc tgaacatgca 1740 gattattttg ctcgatgcgc ttacaacgaa tcattctttg acattgattt ttgtttcttg 1800 acagatggtg aatgtcattc tcttgtggta agattcacta aacgcaaacc gtattttaga 1860 ttcaaagatg ataagttgga caagttgaat gttctttcgt tgtatgactt agtcgttaac 1920 tgtaatcatg gtgaactgtc ctcagcaagt cgtgtcggtt ggaatttagt agacctggat 1980 tcgatgggat cagacgaaaa tattggacgc attactagaa aaccaagtag caagacgcgt 2040 caattcactt acgacttaat gatggtaaat ttccacggtt cagttacaca atacgtgatt 2100 ccagaatggc ttggagagag cattactttg tatgaagaga agcacgaagg tgcagcgttg 2160 ttcggaagat caagtttgtt ttcaaccatg agctgtttgg ccatacactt aatatccaac 2220 tacaagctca tcaagtgttt cgagaatagt tctaacaagc tagtttcttt tatggacggt 2280 ataatcagcg cgatgtctac aaatatcgag ttttctcctt tcaaaaatac tgttttgaac 2340 aatcttaaga aatgcactca aaccattgat tacagcaatg cgaagaattc catatcaccc 2400 agttccagtc gaagtaagtc ttttcgttcc tacttacgat cttctcgacc aaaccacatt 2460 tatgacaaaa tttccgcttg tatcgcaaag aaacaaaatg ggatgttctc atcagaggaa 2520 atgtgtatgc cttatactct cagaaaattt ggcagattgg gaattgacga tgacgactgt 2580 gaactgtcag atgctatctc atcaagggaa gaattataca acaatcatcc ctgtgcgttg 2640 cgactcagaa atatcggaca ttttgtcttc ggcaaacatt ttagatgtaa ggcatgtcgt 2700 aacaattacg gaactagctt cgagctttcc ttgtgtcaac tgggacatca agagacagca 2760 attgaaacgg tacgatccaa cacaattact agtcaatctc gaacaaaact tcaaccgtct 2820 gcaacgtgat gaccgtttgt gttttaattc ttgctacgat taccctaact ctcacatcat 2880 taacagaatc ttaaacacta aaaaggacgt cattcctttt atatttaaac attacgatga 2940 ttccaattca aaaccaatat ctgatatcaa tgtgaccaat tcaccatctt attccaacca 3000 cgtatttgag aaagctaaca ttattaaaac tctacttttc ggcagcacgc taggagtcat 3060 gcctcacctc tgaggatgtg ttatccctgg ctgcaagcgg ggggcacgtg aacaagggtt 3120 ctgtgtctcc ttagatgcgg gggggagtga atacagctaa tgtc 3164 //