ID   AJ390309; SV 1; linear; genomic RNA; STD; VRL; 1201 BP.
XX
AC   AJ390309;
XX
DT   29-AUG-2000 (Rel. 64, Created)
DT   29-AUG-2000 (Rel. 64, Last updated, Version 1)
XX
DE   Potato virus Y partial genomic RNA for polyprotein gene, isolate TU619
XX
KW   coat protein; cp gene; NIb gene; NIb replicase; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1201
RA   Boonham N.;
RT   ;
RL   Submitted (01-NOV-1999) to the INSDC.
RL   Boonham N., Plant Health, CSL, Sand Hutton, YO41 1LZ, UNITED KINGDOM.
XX
RN   [2]
RA   Boonham N., Walsh K., Hims M., North J., Barker I.;
RT   "Sequence comparisons within the PVY coat protein highlight a distinct
RT   group of recombinant isolates (PVYNTN) associated with potato tuber
RT   necrotic ringspot disease (PTNRD).";
RL   Unpublished.
XX
DR   MD5; e9f8492b7c7fa59e75c21e87ce1fd5a5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1201
FT                   /organism="Potato virus Y"
FT                   /isolate="TU619"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..875
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q9EAB4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q9EAB4"
FT                   /protein_id="CAC05621.1"
FT                   /translation="AFTEMMVALDDEFECDTYEVHHQGNDTIDAGGSTKKDAKQEQGSI
FT                   QPNLNKEKEKDVNVGTSGTHTVPRIKAITSKMRMPKSKGATVLNLKHLLEYAPQQIDIS
FT                   NTRATQSQFDTWYEAVQLAYDIGETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQ
FT                   VEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYA
FT                   FDFYEVTSRTPVRAREAHIQMKAAALKSAQSRLFGLDGGISTQEENTERHTTEDVSPSM
FT                   HTLLGVKNM"
FT   mat_peptide     <1..71
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT   mat_peptide     72..875
FT                   /gene="CP"
FT                   /product="coat protein"
FT   3'UTR           876..>1201
XX
SQ   Sequence 1201 BP; 371 A; 211 C; 287 G; 332 T; 0 other;
     gggctttcac tgaaatgatg gttgccttgg atgatgaatt tgagtgcgat acttatgaag        60
     tgcaccatca aggaaatgac acaatcgatg caggaggaag cactaagaaa gatgcaaaac       120
     aagagcaagg tagcattcaa ccaaatctca acaaggaaaa ggaaaaggac gtgaatgttg       180
     gaacatctgg aactcacact gtgccacgaa ttaaagctat cacgtccaaa atgagaatgc       240
     ccaagagtaa gggtgcaact gtactaaatt tgaaacattt actcgagtat gctccacagc       300
     aaattgacat ctcaaatact cgagcaactc aatcacagtt tgatacatgg tatgaagcag       360
     tacaacttgc atacgacata ggagaaactg aaatgccaac tgtgatgaat gggcttatgg       420
     tttggtgcat tgaaaatgga acctcgccaa atatcaatgg agtttgggtt atgatggatg       480
     gagatgaaca agtcgaatac ccactgaaac caatcgttga gaatgcaaaa ccaacactta       540
     ggcaaatcat ggcacatttc tcagatgttg cagaagcgta tatagaaatg cgcaacaaaa       600
     aggaaccata tatgccacga tatggtttag ttcgtaatct gcgcgatgga agtttggctc       660
     gctatgcttt tgacttttat gaagttacat cacggacacc agtgagggct agagaggcac       720
     acattcaaat gaaggccgca gctttaaaat cagctcaatc tcgacttttc ggattggatg       780
     gtggcattag tacacaagag gaaaacacag agaggcacac caccgaggat gtttctccaa       840
     gtatgcatac tctacttgga gtgaagaaca tgtgattgta gtgtctttcc ggacgatata       900
     tagatattta tgtttgcagt aagtattttg gcttttcctg tactactttt atcgtaatta       960
     ataatcgttt gaatattact ggcagatagg ggtggtatag cgattccgtc gttgcagtga      1020
     ccttagctgt cgtttctgta ttattatgtt tgtataaaag tgccgggttg ttgttgttgt      1080
     ggctgatcta tcgattgggt gatgttgcga ttcgtcgtag cagtgaccat gtctggattt      1140
     agttacttgg gtgatgctgt gattctgtca tagcagtggc tgtaaacttc aatcaggaga      1200
     c                                                                      1201
//