ID   AJ390296; SV 1; linear; genomic RNA; STD; VRL; 1203 BP.
XX
AC   AJ390296;
XX
DT   29-AUG-2000 (Rel. 64, Created)
DT   29-AUG-2000 (Rel. 64, Last updated, Version 1)
XX
DE   Potato virus Y partial genomic RNA for polyprotein gene, isolate NN-UK-N
XX
KW   coat protein; cp gene; NIb gene; NIb replicase; polyprotein.
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1203
RA   Boonham N.;
RT   ;
RL   Submitted (01-NOV-1999) to the INSDC.
RL   Boonham N., Plant Health, CSL, Sand Hutton, YO41 1LZ, UNITED KINGDOM.
XX
RN   [2]
RA   Boonham N., Walsh K., Hims M., North J., Barker I.;
RT   "Sequence comparisons within the PVY coat protein highlight a distinct
RT   group of recombinant isolates (PVYNTN) associated with potato tuber
RT   necrotic ringspot disease (PTNRD).";
RL   Unpublished.
XX
DR   MD5; f69a69b3e74d01629a1e0d02401db924.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1203
FT                   /organism="Potato virus Y"
FT                   /strain="NTN"
FT                   /isolate="NN-UK-N"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..875
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q9EAC7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q9EAC7"
FT                   /protein_id="CAC05608.1"
FT                   /translation="AFTEMMVALDDEFECDTYEVHHQGNDTIDAGGSTKKDAKQEQGSI
FT                   QPSLNKEKEKDVNVGTSGTHTVPRIKAITSKMRMPKSKGATVLNLEHLLEYAPQQIDIS
FT                   NTRATQSQFDTWYEAVQLAYDIGETEMPTVMNGLMVWCIENGTSPNVNGVWVMMDGNEQ
FT                   VEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLIRNLRDVGLARYA
FT                   FDFYEVTSRTPVRAREAHIQMKAAALKSAQPRLFGLDGGISTQEENTERHTTEDVSPSM
FT                   HTLLGVKNM"
FT   mat_peptide     <1..71
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT   mat_peptide     72..875
FT                   /gene="CP"
FT                   /product="coat protein"
FT   3'UTR           876..>1203
XX
SQ   Sequence 1203 BP; 375 A; 217 C; 287 G; 324 T; 0 other;
     tagctttcac tgaaatgatg gttgccttgg atgatgaatt tgagtgcgat acttatgaag        60
     tgcatcatca aggaaatgac acaatcgatg caggaggaag cactaagaag gatgcaaaac       120
     aagagcaagg tagcattcaa ccaagtctca acaaggaaaa ggaaaaggac gtgaatgttg       180
     gaacatctgg aactcatact gtgccacgaa ttaaagctat cacgtccaaa atgagaatgc       240
     ccaagagtaa aggtgcaact gtactaaatt tggaacactt actcgagtat gctccacagc       300
     aaattgacat ctcaaatact cgagcaactc aatcacagtt tgatacgtgg tatgaagcag       360
     tacaacttgc atacgacata ggagaaactg aaatgccaac tgtgatgaat gggcttatgg       420
     tttggtgcat tgaaaatgga acctcgccaa acgtcaacgg agtttgggtt atgatggatg       480
     ggaatgaaca agttgagtac ccgttgaaac caatcgttga gaatgcaaaa ccaaccctta       540
     ggcaaatcat ggcacatttc tcagatgttg cagaagcgta tatagaaatg cgcaacaaaa       600
     aggaaccata tatgccacga tatggtttaa ttcgaaatct gcgggatgtg ggtttagcgc       660
     gttatgcctt tgacttttat gaggtcacat cacgaacacc agtgagggct agggaagcgc       720
     acattcaaat gaaggccgca gcattgaaat cagcccaacc tcgacttttc gggttggacg       780
     gtggcatcag tacacaagag gagaacacag agaggcacac caccgaggat gtctctccaa       840
     gtatgcatac tctacttgga gtcaagaaca tgtgatgtag tgtctctccg gacgatatat       900
     aagtatttac atatgcagta agtattttgg cttttcctgt actactttta tcataattaa       960
     taatcagttt gaatattact aatagataga ggtggcaggg tgatttcgtc attgtggtga      1020
     ctctatcttt tagttccgca ttattaagtt ttagataaaa gtgccgggtt gtcgttgttg      1080
     tggatgattc atcgattagg tgatgttgcg attctgtcgt agcagtgact atgtctggat      1140
     ctatctactt gggtggtgtt gtgatttcgt cataacagtg actgtaaact tcaatcagga      1200
     gac                                                                    1203
//