ID   AJ390288; SV 1; linear; genomic RNA; STD; VRL; 1203 BP.
XX
AC   AJ390288;
XX
DT   29-AUG-2000 (Rel. 64, Created)
DT   29-AUG-2000 (Rel. 64, Last updated, Version 1)
XX
DE   Potato virus Y partial genomic RNA for polyprotein gene, isolate PVY-N
XX
KW   cp gene; NIb gene; polyprotein; coat protein; NIb replicase.
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Patatavirales; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1203
RA   Boonham N.;
RT   ;
RL   Submitted (01-NOV-1999) to the INSDC.
RL   Boonham N., Plant Health, CSL, Sand Hutton, YO41 1LZ, UNITED KINGDOM.
XX
RN   [2]
RA   Boonham N., Walsh K., Hims M., North J., Barker I.;
RT   "Sequence comparisons within the PVY coat protein highlight a distinct
RT   group of recombinant isolates (PVYNTN) associated with potato tuber
RT   necrotic ringspot disease (PTNRD).";
RL   Unpublished.
XX
DR   MD5; 5781239910db8330edc47b857defb107.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1203
FT                   /organism="Potato virus Y"
FT                   /strain="NTN"
FT                   /isolate="PVY-N"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..875
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q9EAD5"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q9EAD5"
FT                   /protein_id="CAC05600.1"
FT                   /translation="AFTEMMVALDDELECDTYEVHHQGNDTIDAGGSTKKDAKQEQGSI
FT                   QPNLNKEKEKDVNVGTSGTHTVPRIKAITSKMRMPKSKGATVLNLVHLLEYAPQQIDIS
FT                   NTRATQSQFDTWYEAVQLAYDIGETEMPTVMNGLMVWCIENGTSPNINGVWVMMDGDEQ
FT                   VEYPLKPIVENAKPTLRQIMAHFSDVAEAYIEMRNKKEPYMPRYGLVRNLRDGSLARYA
FT                   FDFYEVTSRTPVRAREAHIQMKAAALKSAQSRLFGLDGGISTQEENTERHTTEDVSPSM
FT                   HTLLGVKNM"
FT   mat_peptide     <1..71
FT                   /gene="NIb"
FT                   /product="NIb replicase"
FT   mat_peptide     72..875
FT                   /gene="CP"
FT                   /product="coat protein"
FT   3'UTR           876..>1203
XX
SQ   Sequence 1203 BP; 376 A; 223 C; 284 G; 320 T; 0 other;
     tagctttcac tgaaatgatg gttgccttgg atgatgaact tgagtgcgat acttatgaag        60
     tgcaccatca aggaaatgac acaatcgatg caggaggaag cactaagaag gatgcaaaac       120
     aagagcaagg tagcattcaa ccaaatctca acaaggaaaa ggagaaggac gtgaatgttg       180
     gaacatctgg aactcatact gtgccacgaa ttaaagctat cacgtccaaa atgagaatgc       240
     ccaagagtaa aggtgcaact gtactaaatt tggtacactt actcgagtat gctccacagc       300
     aaattgacat ctcaaatact cgagcaactc aatcacagtt tgatacgtgg tatgaagcgg       360
     tacaacttgc atacgacata ggagaaactg aaatgccaac tgtgatgaat gggcttatgg       420
     tttggtgcat tgaaaatgga acctcgccaa acatcaacgg agtttgggtt atgatggatg       480
     gagatgaaca agtcgaatac ccactgaaac caatcgttga gaatgcaaaa ccaacactta       540
     ggcaaatcat ggcacatttc tcagatgttg cagaagcgta tatagaaatg cgcaacaaaa       600
     aggaaccata tatgccacga tatggtttag ttcgtaatct gcgcgacgga agtttggctc       660
     gctatgcttt tgacttttat gaggtcacat cacgaacacc agtgagggct agggaagcgc       720
     acattcaaat gaaggccgca gcattgaaat cagcccaatc tcgacttttc gggttggacg       780
     gtggcatcag tacacaagag gagaacacag agaggcacac caccgaggat gtctctccaa       840
     gtatgcatac tctacttgga gtcaagaaca tgtgatgtag tgtctctccg gacgatatat       900
     aagtatttac atatgcagta agtattttgg cttttcctgt actactttta tcataattaa       960
     taatcagttt gaatattact aatagataga ggtggcaggg tgatttcgtc atcgtggtga      1020
     ctctatcttt taattccgca ttattaagtc ttagataaaa gtgccgggtt gtcgttgttg      1080
     tggatgattc atcgattagg tgatgttgcg attctgtcgt agcagtgact atgtctggat      1140
     ctatctgctt gggtggtgtt gtgatttcgt cataacagtg actgtaaact tcaatcagga      1200
     gac                                                                    1203
//