ID   AJ316040; SV 1; circular; genomic DNA; STD; VRL; 1344 BP.
XX
AC   AJ316040;
XX
DT   25-JUL-2003 (Rel. 76, Created)
DT   02-DEC-2004 (Rel. 82, Last updated, Version 4)
XX
DE   Honeysuckle yellow vein mosaic disease associated sequence putative C1
DE   gene, clone U96-2
XX
KW   c1 protein.
XX
OS   Honeysuckle yellow vein betasatellite
OC   Viruses; Tolecusatellitidae; Betasatellite.
XX
RN   [1]
RP   1-1344
RA   Briddon R.W.;
RT   ;
RL   Submitted (16-AUG-2001) to the INSDC.
RL   Briddon R.W., Disease and Stress Biology, John Innes Centre, Colney Lane,
RL   Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1016/S0042-6822(03)00200-9.
RX   PUBMED; 12890625.
RA   Briddon R.W., Bull S.E., Amin I., Idris A.M., Mansoor S., Bedford I.D.,
RA   Dhawan P., Rishi N., Siwatch S.S., Abdel-Salam A.M., Brown J.K., Zafar Y.,
RA   Markham P.G.;
RT   "Diversity of DNA beta, a satellite molecule associated with some
RT   monopartite begomoviruses";
RL   Virology 312(1):106-121(2003).
XX
RN   [3]
RX   DOI; 10.1007/s00705-003-0282-7.
RX   PUBMED; 15168205.
RA   Bull S.E., Tsai W.S., Briddon R.W., Markham P.G., Stanley J., Green S.K.;
RT   "Diversity of begomovirus DNA beta satellites of non-malvaceous plants in
RT   east and south east Asia";
RL   Arch. Virol. 149(6):1193-1200(2004).
XX
DR   MD5; 46c28ced50188518cab6e87c32766920.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1344
FT                   /organism="Honeysuckle yellow vein betasatellite"
FT                   /host="Lonicera japonica"
FT                   /mol_type="genomic DNA"
FT                   /country="United Kingdom"
FT                   /clone="U96-2"
FT                   /note="DNA beta, satellite molecule associated with a
FT                   begomovirus"
FT                   /db_xref="taxon:221037"
FT   CDS             complement(205..555)
FT                   /gene="C1"
FT                   /product="putative C1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:Q7T470"
FT                   /protein_id="CAC87066.1"
FT                   /translation="MTIIYNNGNGIKFIIDVRLQQFIRVQVQVYSTNQPVLTGIRCNIP
FT                   YTYVQMVPPFDFNGTEELVRDTLELMYDDSDISNFKQEEMIDSIDMVMMHWLSDMGVDT
FT                   VDRYVVRNTYTV"
XX
SQ   Sequence 1344 BP; 437 A; 273 C; 253 G; 381 T; 0 other;
     accggtagcg agttggggga cgcgggggaa aggtgggccc caccttctag ataagttttg        60
     gtttattgca ctttgagccc ctgtactttg tcttattcac tttacaccct aaaaatgaat       120
     ttaatgaaga ataaaaataa aattaatcat taattttatt tacacggaga tatgcaatac       180
     attgcttatc gtagtacatg gtatttatac ggtgtatgta tttcgtacaa cgtatctatc       240
     tactgtatct acccccatat cacttaacca gtgcatcatc accatatcaa ttgaatcaat       300
     catctcttct tgtttgaaat tggagatgtc tgaatcatcg tacatcaatt ccagtgtatc       360
     ccttactagc tcctctgtcc cgttgaagtc gaatggtgga accatttgga cgtatgtgta       420
     tggtatgttg cagcggatac ctgtcagtac tggttgattt gttgagtata cctggacttg       480
     cactctgatg aactgttgga gccttacgtc tattatgaac ttgattccgt taccgttgtt       540
     atatattatc gtcatctctt cttgctggat ctatgttcct ctatctacgt ccttttatag       600
     agtggtgatc tgtgggttgt gtgtctcaat ttggtccatg tatttgtact tatttattct       660
     tggaagtatt gtttcctatt acttttgcta tccatccttt atttctgaaa gaaaatagaa       720
     agagaaaaat aaaaatggaa tcaaagagaa aagaaaatta aaacaaaaaa aagaacccaa       780
     cacaaaaata gacaaataaa cagagaaaag aacacctatt ccggcataaa gggagcgcag       840
     ctcaagtgtc aataaaaaaa atagaaaaga aatggcgaaa aaaaaaagaa gaaaaaagaa       900
     ataattgaac gaagtgaaaa taaaattaaa ataaaaataa gaaaataatt aaatgaagcc       960
     cataattaaa aaccatgtag ccctggaaaa agcccaaata aatacacggc ccatgacccg      1020
     atttgaattt gactgttcat cataattaca ataatgccat gccccccagt gccccccaat      1080
     tgccccccga ttcaatcggg gggcacttat ccgtacaatt taattggaca acaatacccc      1140
     taaaaagcag agataacagg cgcgtgggag tgctctgtaa aagtgctttt ctctctcctc      1200
     aaaccccccg gagacgatga tcggaggcct tccggtcatc attttccgac acgcgcggca      1260
     gtgcgaacac ggatgtggga aaaccactac gctacgcagc agccttagct acgccggagc      1320
     ctagctcgcc accgttataa tatt                                             1344
//