ID   AJ314826; SV 1; linear; genomic RNA; STD; VRL; 1449 BP.
XX
AC   AJ314826;
XX
DT   06-JUN-2001 (Rel. 68, Created)
DT   19-SEP-2002 (Rel. 73, Last updated, Version 2)
XX
DE   Turnip mosaic virus partial genomic RNA for Hc-Pro protein, isolate WZ
XX
KW   HC-Pro gene; HC-Pro protein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1449
RA   Zhou X.;
RT   ;
RL   Submitted (04-JUN-2001) to the INSDC.
RL   Zhou X., Institute of Biotechnology, Zhejiang University,
RL   Huajiachi,Hangzhou, Zhejiang,310029, CHINA.
XX
RN   [2]
RA   Shi M., Li G., Tao X.;
RT   "The Sequence analysis of HC-Pro gene of TuMV-WZ isolate";
RL   Wei Sheng Wu Xue Tong Bao 29(1):26-30(2002).
XX
DR   MD5; df9790d8ff26e18367d2d992c36b1abc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1449
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="WZ"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Wenzhou,Zhejiang"
FT                   /db_xref="taxon:12230"
FT   CDS             <3..>1449
FT                   /codon_start=1
FT                   /gene="HC-Pro"
FT                   /product="HC-Pro protein"
FT                   /function="helper component proteinase"
FT                   /db_xref="GOA:Q91DM3"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q91DM3"
FT                   /protein_id="CAC40997.1"
FT                   /translation="HKIVHFSAAGANFWKGFDRCFLAYRSDNREHTCYSGLDVTECGEV
FT                   AALMCLAMFPCGKITCPDCVTDSELSQGQASGPSMKHRLTQLRDVIKSSYPRFKHAVQI
FT                   LDRYEQSLSSANENYQDFAEIQSISDGVEKAAFPHVNKLNAILIKGATATGEEFSQATK
FT                   HLLEIARYLKNRTENIEKGSLKSFRNKISQKAHINPTLMCDNQLDRNGNFIWGERGYHA
FT                   KRFFSNYFEIIDPKQGYTQYETRVVPNGSRKLAIGKLIVPTNFEVLRDQMKGEPVEPYP
FT                   VTVECVSKLQGDFVHACCCVTTESGDPVLSEIKMPTKHHLVIGNSGDPKYIDLPEIEEN
FT                   KMYIAKEGYCYINIFLAMLVNVKESQAKEFTKVVRDKLVGELGKWPTLLDVATACYFLK
FT                   VFYPDVANAELPRMLVDHKTKIIHVVDSYGSLSTGYHVLKTNTVEQLIKFTRCNLESSL
FT                   KHYRVGGTEWEDTHGASNIDDPQL"
XX
SQ   Sequence 1449 BP; 471 A; 316 C; 346 G; 316 T; 0 other;
     gtcacaagat tgtgcacttt agtgcagcag gagccaactt ctggaaaggc tttgacagat        60
     gttttctcgc ataccgtagt gacaatcgcg agcatacatg ctattcaggg ttagatgtta       120
     ctgagtgcgg cgaagtggca gcactgatgt gtttggctat gttcccatgc ggaaagataa       180
     cctgccctga ctgtgtaaca gatagtgagc tatcccaagg acaagcaagc ggaccatcta       240
     tgaagcacag gttaacgcag ctgcgcgatg tcatcaagtc aagctaccca cgcttcaagc       300
     atgcagtgca gatactggac aggtatgagc aatcactgag cagtgcaaac gagaactacc       360
     aagatttcgc agaaatccag agtataagcg atggagttga gaaagctgca ttcccacacg       420
     tcaacaagct aaacgcaata ttgatcaaag gggccacagc gacaggggag gaattctcgc       480
     aggccacgaa gcatttactc gagatagcac gatacctgaa gaacagaact gagaacattg       540
     agaagggttc actgaagtcc tttcgcaaca agatttccca gaaagcgcac atcaacccaa       600
     cactaatgtg cgataaccag ctcgatagaa atggaaattt catatggggt gagagaggat       660
     accatgcaaa acgattcttc agcaactact ttgaaataat cgatccaaag caaggctaca       720
     cccaatacga gacaagagtg gtaccaaatg ggtcacggaa acttgcaatc ggcaaactaa       780
     tagtcccaac gaacttcgaa gttttaagag accagatgaa aggcgaaccg gtagaaccat       840
     acccagtaac agtcgagtgt gtgagcaagt tacagggtga cttcgtccat gcatgttgtt       900
     gtgtaacaac agaatcaggc gacccagtct tgtctgaaat aaaaatgcca accaaacacc       960
     acctagtgat tggcaacagc ggcgatccaa agtacataga tctccctgag atcgaggaga      1020
     ataaaatgta catagcaaaa gaaggttatt gttacatcaa catcttccta gctatgctag      1080
     tgaatgtcaa ggaatcgcag gcaaaggagt tcacgaaagt tgttagggac aaactagttg      1140
     gcgaacttgg caagtggccc actctgttag atgtagcaac cgcttgttat ttcctgaagg      1200
     tattttaccc agacgttgct aacgccgaat tgccacgcat gttagtggat cataagacaa      1260
     agataattca tgtcgttgat tcatatgggt cactgtcaac tggatatcac gtccttaaga      1320
     caaacactgt ggaacaactc attaaattca cgagatgcaa tttggaatca agcttgaagc      1380
     actaccgcgt cggaggaaca gagtgggagg acactcatgg agccagcaac atagatgatc      1440
     cacagttgg                                                              1449
//