ID   AJ311376; SV 1; linear; genomic RNA; STD; VRL; 1848 BP.
XX
AC   AJ311376;
XX
DT   10-FEB-2003 (Rel. 74, Created)
DT   10-FEB-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Narcissus carlavirus partial genomic RNA for TGB2, TGB3, coat protein and
DE   Nucleic acid binding protein, isolate Zhangzhou
XX
KW   TGB2; TGB3; coat protein; nucleic acid binding protein.
XX
OS   Narcissus common latent virus
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes;
OC   Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1848
RA   Adams M.J.;
RT   ;
RL   Submitted (22-MAY-2001) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, IACR-Rothamsted,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Chen J., Chen J., Langeveld S.A., Derks A.F.L.M., Adams M.J.;
RT   "Molecular characterization of carla- and potyviruses from Narcissus in
RT   China";
RL   J. Phytopathol. 151:26-29(2003).
XX
DR   MD5; dc4b9717d5dfb41542bd750a00750994.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1848
FT                   /organism="Narcissus common latent virus"
FT                   /host="Narcissus sp."
FT                   /isolate="Zhangzhou"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Fujian"
FT                   /note="unnamed Carlavirus"
FT                   /db_xref="taxon:160844"
FT   CDS             1..327
FT                   /product="TGB2"
FT                   /note="ORF3"
FT                   /db_xref="GOA:Q80P40"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P40"
FT                   /protein_id="CAC85386.1"
FT                   /translation="MPLTPPRDFTKVYIAAFVGATLALVTWLLTKNTLPAVGDRDHNLP
FT                   HGGLYRDGTKAIKYNSPCKLNSIEGHSRGIWNQPWALVFILSVLIIISNRLDSRACRRC
FT                   GTTH"
FT   CDS             327..512
FT                   /product="TGB3"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P39"
FT                   /protein_id="CAC85387.1"
FT                   /translation="MLLLLAVTAVVFVITSYILTTAQPSCLVVVTGESVRFQGCLTTPE
FT                   FFEGLSKLKPLSSRCL"
FT   CDS             540..1445
FT                   /product="Coat protein"
FT                   /note="ORF5"
FT                   /db_xref="GOA:Q80P38"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P38"
FT                   /protein_id="CAC85388.1"
FT                   /translation="MSGAFGVDTVSESSLAAQKALDRAEANQKNADKLKKFAQPESDGS
FT                   DDEASLEQRLNKLREFLRKQRGAIRVTNIGFETGRPTLNLADDMRPDPSNPYNRPSIEA
FT                   LATIKPRAVSNNMATTEDMMRIYTDLEGLGVPTEQVQTVVIQAVLFCKDASSSVFLDPR
FT                   GSFEWIGGAISADAVIAVLKKDASTLRRVCRLYAPVTWNYMLTHNAPPSDWAAMGFQHE
FT                   DRFAAFDCFDYVENSAAVQPLEGLIRRPTPREKVAHDTHKDIALRAANRNQVFGNFSSE
FT                   VTGGRNGPELTRNYGNAGLR"
FT   CDS             1451..1759
FT                   /product="Nucleic acid binding protein"
FT                   /note="ORF6"
FT                   /db_xref="GOA:Q80P37"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P37"
FT                   /protein_id="CAC85389.1"
FT                   /translation="MHHSLRVALLLTKVMYDSTGVYNFELAYNIAIASGRPVGGGKSSY
FT                   ARRRRAANIGRCHRCYRLWPPMHSTTRCDNKTCVPGISYNERIAQYVVDGVTEVIPS"
FT   3'UTR           1760..1848
XX
SQ   Sequence 1848 BP; 430 A; 465 C; 462 G; 491 T; 0 other;
     atgccactta caccgccccg tgatttcacg aaagtttaca tcgctgcatt cgtcggagct        60
     acactcgcgc ttgtcacttg gttgcttacc aagaacacat tgcctgccgt tggtgaccgt       120
     gaccacaact taccgcacgg aggtttgtat cgggacggaa cgaaagccat caagtataac       180
     agcccctgca agctcaattc tattgaggga cattcgcgag gcatttggaa tcagccttgg       240
     gctctggtct ttatactgtc ggttctgatc ataatttcta accgcttgga ctcacgtgcc       300
     tgccgccgtt gcgggaccac ccactaatgc ttttgcttct agcggtcact gctgttgtgt       360
     tcgtgattac ttcatacatc cttaccacag cacaaccgag ctgtcttgta gtagtgactg       420
     gtgagtctgt acgattccag ggctgcttaa caacccctga gttcttcgag ggcttgtcaa       480
     aacttaagcc actttcttct cgctgccttt aggtgtatag gctattattg atatacacaa       540
     tgagtggagc ttttggggtt gacactgttt cagaatcgtc actagcagcg cagaaagcac       600
     ttgatcgtgc ggaggctaac caaaagaatg cagacaaact gaagaagttt gcccaacctg       660
     agagtgacgg gtctgacgat gaagcttcac tggagcagag gcttaacaaa ttgcgcgagt       720
     tccttcgtaa gcagcgtggc gcgatacgcg tgactaatat aggatttgag actggccgcc       780
     caaccttgaa cttggctgac gacatgaggc ctgaccccag caatccttac aatcgtccat       840
     caattgaagc tctcgcaact atcaaacctc gggcggtctc aaataacatg gctaccactg       900
     aagacatgat gcgaatttat accgatctgg agggtcttgg ggtccccact gagcaggtgc       960
     agactgttgt aattcaggcc gtcctatttt gtaaggatgc gagcagttcc gtgttcctgg      1020
     acccacgagg ctcctttgaa tggattggcg gagctatttc agcagatgct gtaattgcag      1080
     tgctcaagaa ggatgcgagt accctgagac gagtttgccg tctctatgcc ccggtgacgt      1140
     ggaactatat gctaactcat aatgcaccgc catctgactg ggccgccatg ggctttcagc      1200
     atgaggatcg attcgctgca ttcgattgct ttgactatgt ggagaattcc gccgctgtgc      1260
     agccgttgga ggggttaatt cggaggccta cgcctcgtga gaaagttgcg cacgataccc      1320
     acaaggacat agctctccgg gccgcaaacc gcaatcaggt ctttgggaac ttctctagtg      1380
     aagtcacagg tgggcggaac ggccccgagc tcacgcgcaa ctacggcaac gctgggctac      1440
     gctgaacacc atgcatcact ctctacgtgt agctctactg cttactaagg taatgtatga      1500
     tagtactggt gtgtataact ttgaacttgc ttataatatt gccatcgcct ctggccggcc      1560
     agtcggaggt ggcaagtcgt cctacgctcg tcggcgtcgt gctgcaaaca tcggtcgttg      1620
     ccaccgctgc taccgcctct ggccacctat gcattctact actcggtgtg ataataaaac      1680
     ctgtgtgcct ggcatctcat ataatgagcg tatcgctcag tacgttgtgg atggagtaac      1740
     tgaggtgata ccatcctaga ttcactgttg tgagtggtca ctaaatccta tttaatatat      1800
     aaggtgtgtc actataaata aagtttggtt tttaagctat tttttccc                   1848
//