ID   AJ311372; SV 1; linear; genomic RNA; STD; VRL; 1669 BP.
XX
AC   AJ311372;
XX
DT   10-FEB-2003 (Rel. 74, Created)
DT   10-FEB-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Narcissus yellow stripe virus partial genomic RNA for viral polyprotein
DE   (ORF1), isolate Zhangzhou
XX
KW   coat protein; NIb protein; viral polyprotein.
XX
OS   Narcissus yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1669
RA   Adams M.J.;
RT   ;
RL   Submitted (22-MAY-2001) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, IACR-Rothamsted,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RA   Chen J., Chen J., Langeveld S.A., Derks A.F.L.M., Adams M.J.;
RT   "Molecular characterization of carla- and potyviruses from Narcissus in
RT   China";
RL   J. Phytopathol. 151:26-29(2003).
XX
DR   MD5; fa6feb664e1ec9e9e5ba0dd2a575f6a2.
DR   EuropePMC; PMC5575871; 28851396.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1669
FT                   /organism="Narcissus yellow stripe virus"
FT                   /host="Narcissus sp."
FT                   /isolate="Zhangzhou"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Fujian"
FT                   /db_xref="taxon:160843"
FT   CDS             <1..1458
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="Polyprotein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q80P36"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q80P36"
FT                   /protein_id="CAC85379.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVLAMRYSLLKAGLPVNEHKDMCKFIVNG
FT                   DDLLLSLAPEYEHILDTLTDRFSELGLKYTFCTKTRNKQDLWFMSHKGIRREGIWIPKL
FT                   EQERIVSILEWDRSKEPEHRLEAICAAMIESWGYDALTHEIRKFYSWLLSQAPYSGLAQ
FT                   EGKAPYIAESALRKLYLDKDVEQSDITKYIEAIFEDYVEGEFSEVFHQSGKQALDAGLE
FT                   EDRNLHKDKGKQSVASEVRKDNTQIRDKDVNVGVQGSFPVPRLKTLTGKMNLPLHKRRV
FT                   VLNLEHLLSYSPNQVDLSNTRATQNQFASWYEGVKSEYDVDDDKMAIILNGFMVWCIEN
FT                   GTSPNINGVWVMMDGEEQVEFPLKPIIDHAKPTLRQIMAHFSNVAEAYIERRNYDRPYM
FT                   PRYGLQRNLTDMSLARFAFDFYEMTSKTPVRAREAHIQMKAAALRGAKNHLFGLDGNVG
FT                   SADENTERHTTDDVNRNMHNLLGVRGV"
FT   mat_peptide     <1..633
FT                   /product="NIb protein"
FT                   /note="ORF1"
FT   mat_peptide     634..1455
FT                   /product="Coat protein"
FT                   /note="ORF1"
FT   3'UTR           1459..1669
FT                   /note="ORF1"
XX
SQ   Sequence 1669 BP; 540 A; 324 C; 390 G; 415 T; 0 other;
     gggaataata gcgggcagcc ttcaactgtt gttgataaca cactcatggt tgtcttggca        60
     atgagatact cacttttgaa agcaggttta cccgtgaatg agcacaagga tatgtgcaaa       120
     tttattgtga acggggatga cttgctatta agcctagcgc cggagtatga acacatcttg       180
     gacactctga ccgacagatt ctctgaacta ggcctcaaat acacattttg cacaaaaacg       240
     agaaacaagc aggatctttg gttcatgtca cataaaggaa ttcgtaggga agggatctgg       300
     ataccaaaac ttgaacaaga acgaattgtg tccattttgg agtgggatag atcaaaagaa       360
     cctgaacata gactggaagc aatctgtgca gccatgattg aatcatgggg ttacgacgcg       420
     cttacacatg agataagaaa gttctactca tggttgctct cccaagcacc atacagcgga       480
     ctggcacagg agggtaaggc accatacatt gctgaatcag ctctcagaaa attgtatctt       540
     gataaagacg tggaacagag cgacataaca aaatacattg aagccatctt tgaggactat       600
     gttgagggtg aattctctga agttttccac caatctggaa aacaagcact tgatgccggt       660
     ctagaggaag acagaaatct acacaaggat aaagggaagc aaagtgtcgc cagtgaagta       720
     cggaaagata acacacagat tcgtgacaag gatgtaaacg ttggtgtaca aggatctttt       780
     ccggtaccac gactcaaaac tttgaccgga aaaatgaatt taccacttca caaaaggcga       840
     gtagtgttga acctggaaca cttactgtca tactcaccaa atcaggttga tctctcgaac       900
     actagagcca cacaaaatca gtttgcttca tggtatgaag gagtaaaatc agaatacgat       960
     gtggatgatg ataagatggc tataatttta aatggattca tggtgtggtg cattgagaat      1020
     ggaacttcac cgaatataaa cggagtgtgg gtgatgatgg atggagaaga acaagttgaa      1080
     tttccactta aacccatcat tgatcacgcc aaacctacac tcaggcagat aatggcccat      1140
     ttcagtaacg ttgctgaagc gtatattgaa agaaggaact atgacagacc atacatgcca      1200
     cgttatggtc ttcagcgtaa tttaaccgac atgagcttgg cacgctttgc ctttgacttc      1260
     tatgaaatga cgtcaaagac gccagtccga gcgcgagaag cgcacatcca aatgaaagcg      1320
     gctgcactac gtggagccaa gaatcactta tttgggctgg atggaaatgt cggatcagca      1380
     gacgagaaca cggaaagaca caccaccgac gatgtaaata ggaacatgca caaccttcta      1440
     ggcgtgaggg gtgtgtaatt gttgtgtcga tatttataat gagatatatc catatagata      1500
     tccgttagta ttctcatcgt agagaagtat tttatatagt gtttaagcca gttgggtcgg      1560
     acccagagtg caccactcta tctatatact ttgttcgaat acattgtact tactaaggga      1620
     acagtgagag cctctctcga actcctttac taagtatagt gtgctagag                  1669
//