ID   AJ311169; SV 1; linear; mRNA; STD; VRL; 1638 BP.
XX
AC   AJ311169;
XX
DT   09-MAY-2001 (Rel. 67, Created)
DT   15-NOV-2004 (Rel. 81, Last updated, Version 2)
XX
DE   Sugarcane mosaic virus partial mRNA for Nuclear Inclusion II protein and
DE   Coat protein, clone s15
XX
KW   coat protein; Nuclear Inclusion II protein.
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Patatavirales; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1638
RA   Achon M.M.A.;
RT   ;
RL   Submitted (04-MAY-2001) to the INSDC.
RL   Achon M.M.A., Area de Proteccio de Conreus, Centre Udl-Irta, Alcalde Rovira
RL   Roure, 177, Lleida, 25198, SPAIN.
XX
RN   [2]
RA   Achon M.M.A., Sobrepere M., Minguell R.;
RT   "Molecular and Biological properties of a Sugarcane Mosaic Potyvirus
RT   isolate from Spain";
RL   Z. Pflanzenkr. Pflanzenschutz 110:324-331(2004).
XX
DR   MD5; 1f29993ebf98c3f4e34b489927f0af91.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1638
FT                   /organism="Sugarcane mosaic virus"
FT                   /isolate="Spanish"
FT                   /mol_type="mRNA"
FT                   /country="Spain:Lleida"
FT                   /clone="s15"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..>1381
FT                   /codon_start=1
FT                   /product="viral polyprotein"
FT                   /db_xref="GOA:Q91QR7"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q91QR7"
FT                   /protein_id="CAC38365.1"
FT                   /translation="REQKLELHRGGGRSRTSGSWFMSTRGIKCEGIYIPKLEKERIVAI
FT                   LEWDRSNLPEHRLEAICAAMVEAWGYPDLVQEIRKFYAWLLEMQPFANLAKEGLAPYIA
FT                   ETALRNLYLGTGIKEEEIEKYFKQFAKDLPGYIEDYNEDVFHQSGSVDAGAQGGNSGSG
FT                   ASASAAGSGSGTRPPSTGSAAQGNTPPASGGSSGNNGGGQSGSNGTGGQAGSSGTGGQR
FT                   DKDVDAGSTGKISVPKLKAMSKKMRLPKAKGKDVLHLDFLLTYKPQQQDISNTRATKEE
FT                   FDRWYDAIKKEYEIDDTQMTVVMSGLMVWCIENGCSPNINGNWTMMDGDEQRVFPLKPV
FT                   IENASPTFRQVMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDYSLARYAFDFYEMTS
FT                   RTPARAKEAHMQMKAAAVRGSNTRLFGLDGNVGETQENTERHTAGDVSRNMHSLLGVQQ
FT                   HH"
FT   mat_peptide     <1..441
FT                   /product="Nuclear inclusion II protein"
FT   mat_peptide     <442..1380
FT                   /product="Coat Protein"
FT   3'UTR           <1381..1638
XX
SQ   Sequence 1638 BP; 500 A; 345 C; 424 G; 369 T; 0 other;
     agggaacaaa agctggagct ccaccgcggt ggcgggcgct ctagaactag tggatcctgg        60
     ttcatgtcga ctcgaggtat caaatgtgag ggcatctata taccaaaact tgagaaagaa       120
     agaatagttg ccatactcga atgggatcgg tcaaacctac ctgagcaccg tcttgaagct       180
     atatgcgcag ccatggtaga agcatgggga tatccagacc ttgttcaaga aatacgaaaa       240
     ttctacgcgt ggcttctcga aatgcaacca tttgcaaatc tagcgaaaga gggcttagca       300
     ccatatatag cagaaaccgc actcagaaat ttgtacttgg gcacggggat caaggaagag       360
     gagattgaaa aatactttaa acagtttgct aaagatctcc ctggctatat agaagactat       420
     aatgaagatg ttttccatca atccggttct gtggacgcgg gagcccaagg aggaaatagc       480
     ggctcaggag catccgcatc tgcagcgggt agtgggtcag gaactagacc accttcaact       540
     ggttcagcag cacagggaaa tacacctcca gcatcaggtg gatcatcagg aaacaatgga       600
     ggcggtcaat caggttcaaa cggcactgga ggtcaggcag gctcaagcgg aacagggggc       660
     caaagagaca aagacgttga tgctggttca acaggaaaaa tatcagtgcc aaagcttaag       720
     gcgatgtcga agaaaatgcg cctgccaaag gcaaaaggga aagacgtttt gcacttagat       780
     ttcttgttaa catataaacc acaacagcaa gacatatcaa acactagagc aactaaggaa       840
     gagtttgata gatggtacga tgccataaag aaggagtacg aaattgatga tacacaaatg       900
     acagttgtca tgagtggtct catggtatgg tgcatcgaaa acggttgctc accaaacata       960
     aacggaaatt ggacgatgat ggacggagac gaacaaaggg tttttccatt aaagccagtc      1020
     attgaaaacg catctccaac tttccgacaa gtaatgcatc attttagtga tgcagctgaa      1080
     gcgtatatag agtaccgaaa ctctacagag cgatacatgc caagatacgg tcttcagcga      1140
     aatctcaccg actatagctt agcgcggtat gcttttgatt tctatgaaat gacttcgcgc      1200
     acaccagcca gagctaagga agcccacatg cagatgaaag ccgcagcagt tcgtggttca      1260
     aacacacgtc tgttcggtct ggacggaaat gtcggcgaga cccaggagaa tacagagaga      1320
     cacacagctg gtgacgttag tcgcaatatg cactctctgt tgggagtgca gcagcaccac      1380
     tagtctcctg gaaaccctgt ttgcagtacc tatagtatat tactaaatag tatgcttgtg      1440
     aggccttgcc tcgtatgtat gtgaggttat acctcgtatt tactatttca gtgtatgtac      1500
     ttcaagcgtg agccagtctg caggacacag ggttggaccc agtgtcttct ggtgtagcgt      1560
     gtactagcgt cgaaccaatg gacggacggc actgggagtg gttttaccat tggtgctgcg      1620
     agtctcttgg tgagagac                                                    1638
//