ID   AJ310192; SV 1; linear; genomic RNA; STD; VRL; 1809 BP.
XX
AC   AJ310192;
XX
DT   06-FEB-2002 (Rel. 70, Created)
DT   03-JUN-2002 (Rel. 72, Last updated, Version 2)
XX
DE   Sorghum mosaic virus partial genomic RNA for polyprotein
XX
KW   ORF1; ORF2; CI protein; polyprotein.
XX
OS   Sorghum mosaic virus
OC   Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC   Patatavirales; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1809
RA   Adams M.J.;
RT   ;
RL   Submitted (28-MAR-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-001-0799-6.
RX   PUBMED; 12111432.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of potyviruses from sugarcane and maize in China";
RL   Arch. Virol. 147(6):1237-1246(2002).
XX
DR   MD5; 1c638c3297fb712d3d0edaf6db198ff8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1809
FT                   /organism="Sorghum mosaic virus"
FT                   /host="Sugarcane"
FT                   /isolate="Linpin"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:32619"
FT   CDS             <1..>1809
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q8QXL7"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR011492"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QXL7"
FT                   /protein_id="CAC84432.1"
FT                   /translation="LTLNTDKQLTIDFDTTQDLPADTFSNDVTFEQWWSNQLENNRTVP
FT                   HYRIGGEFVEFTRQNAATVSIGIAHNRIEKEFLLRGAVGSGKSTGLPYHLSQRGKVLLL
FT                   EPTRPLAENVCRQLQGPPFNVSPTLQMRGLSSFGSTPITIMTSGFALHMYANNPDKISN
FT                   YDYIIFDECHIMEAPAMAFYCLLKEYNFDGKIIKVSATPPGRECEFSTQYPVDIHVCEN
FT                   LTQNQFVLELGTGSKADATKYGNNILVYVASYSDVDSLARALTEHHYSVIKVDGRTMKQ
FT                   DTTGIHTNGTDARKCFVVATNIIENGVTLDVDVVVDFGLKVSAELDVDNRAIMYRKVSI
FT                   SYGERIQRLGRVGRTKPGTIIRSGVTMKGSQEIPAMIATEAAFLCFAYGLKVITHNVST
FT                   THLAKCTVKQARTMMHFELSPFIMSELVKFDGSMHPQIHEKLKKYKLRDSVIMLRTNAV
FT                   PYPNVHNWLTVKDYNKIGCNLELGEYIKIPYFVRGVSEKLYSEIYDIVLKYGSTSCYGR
FT                   LSSACAGKVAYTLRTDPYSLPRTIAIINRLICEEHAKREHYNTMISNPSSSHAFSLSGI
FT                   VNMLASRYMKDHSKENIEKLTRVKDQL"
FT   mat_peptide     <1..>1809
FT                   /product="CI protein"
FT                   /note="ORF2"
XX
SQ   Sequence 1809 BP; 612 A; 322 C; 372 G; 503 T; 0 other;
     ttaacgttga atactgataa gcagctaacg atagacttcg atacaacaca agaccttcca        60
     gcggatacat ttagtaatga tgtaactttt gagcaatggt ggtctaatca gttggaaaat       120
     aacagaacag ttccacacta tcgcattggt ggcgaattcg tagagttcac aagacaaaac       180
     gcagcaacag ttagcatagg aatagcacac aatcggattg aaaaggaatt tctattgcgt       240
     ggagctgtag gttcaggaaa atcaacagga ctaccgtatc atttgagtca acgaggaaaa       300
     gttcttttgt tggaaccaac tcgtccctta gcggagaatg tttgtaggca attacaggga       360
     cccccattta atgttagtcc aactttgcaa atgagaggtt taagttcttt tggttccact       420
     ccgataacca taatgacgtc gggattcgct ctacacatgt atgcaaataa cccagataaa       480
     attagtaact acgattatat catttttgat gaatgtcata taatggaagc accagcaatg       540
     gctttttact gtttacttaa ggaatacaat ttcgatggca aaatcataaa agtctcagca       600
     accccaccag gaagagagtg tgaattctca actcagtatc cagtagatat acacgtttgt       660
     gaaaatttaa ctcaaaatca atttgttttg gagttgggca ctggatctaa agcagacgca       720
     acgaagtatg gaaataacat tcttgtatat gttgcaagtt atagtgacgt agattcctta       780
     gcacgagcgc tcacagaaca tcattactca gtaattaagg ttgacggaag aacgatgaaa       840
     caggatacaa caggaattca tacaaatggg actgatgcca gaaagtgttt cgtggtcgcc       900
     actaacatta tcgaaaatgg cgttacatta gatgtcgatg ttgtagtaga ttttggtctc       960
     aaagtttccg ctgaactaga tgtcgataat cgagcgataa tgtatcgaaa ggttagtata      1020
     tcgtatggtg aacgaatcca gagacttgga agggttggac gaaccaaacc tgggactatc      1080
     attagatcgg gtgtgacaat gaaaggatca caggagattc cagctatgat agccacagaa      1140
     gcggcctttt tatgttttgc ttatggactc aaagttataa ctcataatgt ttcaaccact      1200
     catttggcga aatgtactgt aaaacaagca agaactatga tgcattttga actctcacct      1260
     tttataatgt ctgaattagt taaatttgat ggttcaatgc atcctcaaat acatgaaaaa      1320
     ctcaagaaat acaaacttag ggattcagtt ataatgctca gaacaaatgc tgtgccttac      1380
     ccgaatgtcc acaactggtt aaccgtgaag gattacaata agataggatg caatcttgag      1440
     ttgggtgaat acataaagat tccatatttt gttagaggtg tatcagaaaa gctatacagt      1500
     gaaatatatg atattgttct taagtatggc tcaacaagtt gttatggcag actatcgagc      1560
     gcctgtgcag gaaaagtggc atacactctg agaaccgatc cttactcgtt accgcgaacg      1620
     attgcaatca taaacagatt aatctgtgaa gagcatgcaa agagagagca ttacaataca      1680
     atgatttcaa atccttcctc ctcacatgct ttttcattga gtggcatagt taacatgctt      1740
     gcttcaagat atatgaaaga tcactcaaag gaaaatatcg aaaaacttac aagagtgaaa      1800
     gatcagctc                                                              1809
//