ID   AJ310117; SV 1; linear; genomic RNA; STD; VRL; 2014 BP.
XX
AC   AJ310117;
XX
DT   06-FEB-2002 (Rel. 70, Created)
DT   03-JUN-2002 (Rel. 72, Last updated, Version 2)
XX
DE   Sugarcane mosaic virus partial genomic RNA for polyprotein gene, isolate
DE   Shandong
XX
KW   6K2 protein; CI protein; polytprotein.
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2014
RA   Adams M.J.;
RT   ;
RL   Submitted (13-MAR-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-001-0799-6.
RX   PUBMED; 12111432.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of potyviruses from sugarcane and maize in China";
RL   Arch. Virol. 147(6):1237-1246(2002).
XX
DR   MD5; 0661d0caf42651d49ba63745da0c3963.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2014
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="maize"
FT                   /isolate="Shandong"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Shandong"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..>2014
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="ORF1"
FT                   /db_xref="GOA:Q8QXL9"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR011492"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QXL9"
FT                   /protein_id="CAC84106.1"
FT                   /translation="SVDVDEPLTLSTDKNLTIDFDTNQDLPADTFSNDVTFENWWANQI
FT                   NNNRTVPHYRLGGKFVEFTRENAAMVSIELAHSNIEKEFLLRGAVGSGKSTGLPYHLSM
FT                   RGKVLLIEPTRPLAENVCRQLQGPPFNVSPTLQMRGLSTFGCTPITIMTSGFALHMYAN
FT                   NPDKISEYDFIIFDECHIMEAPAMAFYCLLKEYEYRGKIIKVSATPPGRECEFSTQHPV
FT                   DIHVCESLTQQQFVMELGTGSTADATKYGNNILVYVASYNDVDSLSHALTELKYSVIKV
FT                   DGRTMKQNTAGIVTNGTSSKKCFVVATNIIENGVTLDVDVVVDFGLKVTAELDVDNRAI
FT                   MYKRVSISYGERIQRLGRVGRNKPGTVIRIGKTMKGLQEIPAMIATEAAFMCFAYGLKV
FT                   ITHNVSTTHLAKCTVKQARTMMQFELSPFVMAELVKFDGSMHPQIHEALTKYKLRDSVI
FT                   MLRPNAIPKVNLHNWLTARDYNRLGCSLELEDHVKIPYYIRGVPDKLYGKLYDIILQYS
FT                   PTSCYGRLSSACAGKVAYTLRTDPCSLPRTIAIINALITEEYAKRDHYRNMIANPSSSH
FT                   AFSLNGLVSMIASRYMKDHTKENIDKLVRVRDQLLEFQGTGMQFQDPSELMDIGALNTV
FT                   IHQGMDATAACIGLQGRWNASLIQRDLMISAGVIHE"
FT   mat_peptide     1..1914
FT                   /product="CI protein"
FT   mat_peptide     1915..>2014
FT                   /product="6K2 protein"
XX
SQ   Sequence 2014 BP; 653 A; 393 C; 443 G; 525 T; 0 other;
     agtgttgatg ttgatgaacc gttaacactg agtaccgata agaatttgac tatagatttc        60
     gacacaaatc aagatttgcc agcggataca ttcagcaatg acgtaacatt cgagaactgg       120
     tgggctaatc agataaacaa caatagaaca gtgccacact atcgacttgg gggaaagttt       180
     gtggaattca caagagagaa tgcagcaatg gttagcattg agcttgccca ttcgaacatc       240
     gaaaaagagt ttctactcag aggagctgtt gggtcaggaa aatccacagg tttgccgtat       300
     catctcagta tgcgtggaaa agtgctattg atagaaccta ctcgaccatt agctgagaac       360
     gtctgcaggc agctgcaagg tcctccattt aatgtgagcc ccactttaca aatgagagga       420
     ttgagcacat ttggctgcac tcctatcacg ataatgacat ctggcttcgc attgcacatg       480
     tatgcaaata accccgataa gatctctgaa tacgacttca tcatctttga tgaatgtcac       540
     attatggaag cacctgcaat ggcattctat tgtttgctta aggagtatga ataccgaggt       600
     aagataataa aagtttcagc tacaccacca ggacgagaat gcgagttttc aacccaacat       660
     ccagtagata tacatgtatg tgaaagcttg acacaacagc aattcgtcat ggaactagga       720
     acaggatcaa ctgctgatgc aaccaaatat ggcaataaca tattagtgta cgttgcaagt       780
     tataatgatg tagattcttt gtcccatgct ctaactgaac ttaaatattc agtgattaaa       840
     gtcgatggaa gaacaatgaa gcagaacacc gcaggaatcg taacaaatgg aacatctagt       900
     aagaaatgct tcgttgtggc tacaaacatt attgaaaacg gtgtaacgct agatgtcgat       960
     gttgtcgtcg actttgggct taaagtaaca gctgaattag atgttgataa cagggcgata      1020
     atgtataaac gtgtgagcat atcttatggc gagcgcattc agagactcgg aagagtcgga      1080
     aggaataagc ctggaacagt tatccgcatc gggaaaacaa tgaaaggttt acaagaaatt      1140
     ccggcgatga ttgccaccga agcagctttc atgtgttttg catatggact gaaggttata      1200
     acacataatg tatcaacaac acatctagca aaatgcaccg tcaaacaagc tagaaccatg      1260
     atgcaatttg agctatcacc atttgtaatg gctgagttgg ttaaatttga cggatctatg      1320
     catccacaga ttcacgaagc gttaaccaag tataaattga gagattctgt gatcatgtta      1380
     agaccgaatg caataccaaa ggttaatctt cacaactggc tgacggctcg tgattataat      1440
     aggttaggct gctcattaga acttgaagac cacgttaaaa taccatatta tatacgggga      1500
     gttcctgaca agctgtatgg gaagttatac gatattatcc ttcaatacag ccctacaagt      1560
     tgctatggaa gactatcaag cgcttgtgca ggtaaggtag catatacact gcgcactgat      1620
     ccttgttcgt taccaagaac aatagctata atcaacgcat taatcactga agagtatgca      1680
     aagagggatc attacagaaa catgatagcg aacccttcgt catcgcacgc cttttcactt      1740
     aatgggctgg tatccatgat cgcttctcga tacatgaaag atcacacgaa ggaaaacatt      1800
     gataaacttg taagagtgcg cgaccagcta cttgaattcc aaggcacagg tatgcaattt      1860
     caagatcctt cagaattgat ggacattggt gctttaaaca cagttattca ccaaggaatg      1920
     gacgctacgg ctgcttgtat tggactgcaa gggcgctgga atgcttcgct cattcaacgc      1980
     gatttgatga tatcagcagg cgttattcac gagg                                  2014
//