ID   AJ309511; SV 1; linear; genomic RNA; STD; VRL; 1382 BP.
XX
AC   AJ309511;
XX
DT   30-JAN-2001 (Rel. 66, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Carnation mottle virus p7 gene, p9 gene and cp gene, genomic RNA, isolate
DE   usa-1
XX
KW   coat protein; cp gene; movement protein; p7 gene; P9 gene.
XX
OS   Carnation mottle virus
OC   Viruses; Riboviria; Tombusviridae; Procedovirinae; Alphacarmovirus.
XX
RN   [1]
RP   1-1382
RA   Pallas V.;
RT   ;
RL   Submitted (29-JAN-2001) to the INSDC.
RL   Pallas V., Biologia del estres, Instituto de Biologia Molecular y Celular
RL   de Plantas-CSIC, Avenida de los Naranjos s/n, 46022 Valencia, SPAIN.
XX
RN   [4]
RX   DOI; 10.1007/s007050170051.
RX   PUBMED; 11722023.
RA   Canizares M.C., Marcos J.F., Pallas V.;
RT   "Molecular variability of twenty-one geographically distinct isolates of
RT   Carnation mottle virus (CarMV) and phylogenetic relationships within the
RT   Tombusviridae family";
RL   Arch. Virol. 146(10):2039-2051(2001).
XX
DR   MD5; 85fbe21a0a472db60f82a004075b5f33.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1382
FT                   /organism="Carnation mottle virus"
FT                   /variety="894MFJ"
FT                   /isolate="usa-1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:11986"
FT   CDS             1..186
FT                   /gene="p7"
FT                   /product="movement protein"
FT                   /note="The central region contains an RNA-binding motif"
FT                   /db_xref="GOA:Q9DJV4"
FT                   /db_xref="InterPro:IPR007982"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DJV4"
FT                   /protein_id="CAC27510.1"
FT                   /translation="MDIESEVPVVEKQMLAGNRGKQKTRRSVAKDAIRKPASDSTNGGN
FT                   WVNVADKIEVHIHFNF"
FT   CDS             92..346
FT                   /gene="p9"
FT                   /product="movement protein"
FT                   /db_xref="GOA:Q999Z0"
FT                   /db_xref="UniProtKB/TrEMBL:Q999Z0"
FT                   /protein_id="CAC27511.1"
FT                   /translation="MPSVNLHLIVLTGVIGLMLLIRLRCTFTSTFSLPPLVTLNQIIAL
FT                   SFCGLLLNSISRAERACYYNYSVDSSKQQHISISTPNGR"
FT   CDS             336..1382
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q999Y9"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR013669"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q999Y9"
FT                   /protein_id="CAC27512.1"
FT                   /translation="MEDKGEKIAMNPTVQTLAQKGDKLAVKLVTRGWASLSTNQKRRAE
FT                   MLAGYTPAILAFTPRRPRMTNPPPRTSRNSPGQAGKSMTMSKTELLSTVKGTTGVIPSF
FT                   EDWVVSPRNVAVFPQLSLLATNFNKYRITALTAKYSPACSFETNGRVALGFNDDASDTP
FT                   PTTKVGFYDLGKHVETAAQTAKDLVIPVDGKTRFIRDSASDGAKLVDFGRIVLSTYGFD
FT                   KADTVVGELFIQYTIVLSDPTKTAKISQASNDKVSDGPTYVVPSVNGNELQLRVVAAGK
FT                   WCIIVRGTVEGGFTKPTLIGPGISGDVDYESARPIAICVLVTQMEGQILKITKTSAGQP
FT                   LQWVVYRM"
XX
SQ   Sequence 1382 BP; 400 A; 316 C; 360 G; 306 T; 0 other;
     atggatattg aatcggaagt accagtagtt gaaaagcaaa tgctcgctgg gaacagagga        60
     aaacaaaaga cacgtagatc ggtggccaag gatgccatcc gtaaacctgc atctgatagt       120
     actaacgggg gtaattgggt taatgttgct gataagattg aggtgcacat tcacttcaac       180
     ttttagtttg cccccactgg taactttaaa tcagataata gcgttgtcat tttgcggtct       240
     tctgttaaac agcatctctc gggcagaaag agcgtgctat tacaactact ctgttgatag       300
     ttctaaacaa caacacattt cgataagtac accaaatgga agataaagga gaaaagatcg       360
     cgatgaatcc cactgtgcaa acattggcgc agaaggggga caagttagcc gtgaagttgg       420
     tgacaagggg ttgggcctct ctgagtacga accagaagag gagagctgaa atgcttgctg       480
     gatacactcc agcgatccta gccttcacac cccgacgacc acggatgacg aaccctcctc       540
     caagaaccag taggaattca ccaggacaag ctggaaagtc catgacgatg agtaagaccg       600
     aactattaag caccgtcaaa ggtaccaccg gtgttatccc gagctttgaa gactgggtcg       660
     tttccccccg aaacgtagcc gtcttccctc aactctcgct gctggcgacg aacttcaaca       720
     agtaccgcat tactgcgctc actgcgaagt actcacccgc gtgcagcttc gagaccaatg       780
     ggagggtggc tctgggattc aacgatgacg cttcggatac accaccaacc accaaggttg       840
     gattttacga tctgggcaaa catgtggaaa ctgctgcaca gacagctaag gatctagtga       900
     taccagtaga cggcaaaacc cggttcatca gggactcggc tagtgatggt gccaaactag       960
     tcgattttgg acggatagtc ttgtcaacat acgggtttga caaggctgac actgtggtgg      1020
     gcgaattatt catacagtac acgattgtgc tgagtgaccc aaccaagacg gccaaaattt      1080
     cacaggcaag caacgataag gtgtcggacg gaccaacgta tgtggtccct tcggttaatg      1140
     gcaacgagct acaactaaga gtggtagccg ctgggaaatg gtgcattata gtgcggggta      1200
     cggttgaggg aggcttcacc aaacccacac ttattgggcc gggaatcagc ggtgatgtgg      1260
     actatgaaag tgccagacct atcgccattt gtgtgttggt gacacaaatg gagggccaga      1320
     tattgaaaat caccaagacc tcagcaggac aaccactcca atgggttgtt tataggatgt      1380
     ga                                                                     1382
//