ID   AJ308477; SV 1; linear; genomic RNA; STD; VRL; 1028 BP.
XX
AC   AJ308477;
XX
DT   11-FEB-2001 (Rel. 66, Created)
DT   25-AUG-2011 (Rel. 109, Last updated, Version 4)
XX
DE   Indian cardamom mosaic virus partial cp gene for coat protein, genomic RNA,
DE   isolate Vandiperiyar
XX
KW   coat protein; cp gene.
XX
OS   Indian cardamom mosaic virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1028
RA   Usha R.;
RT   ;
RL   Submitted (07-FEB-2001) to the INSDC.
RL   Usha R., Plant Biotechnology, Madurai Kamaraj University, Palkalai Nagar,
RL   Madurai, Tamil Nadu 625021, INDIA.
XX
RN   [3]
RX   DOI; 10.1023/A:1011191614839.
RX   PUBMED; 11556406.
RA   Jacob T., Usha R.;
RT   "3'-Terminal sequence analysis of the RNA genome of the Indian isolate of
RT   cardamom mosaic virus: a new member of genus Macluravirus of potyviridae";
RL   Virus Genes 23(1):81-88(2001).
XX
RN   [4]
RA   Jacob T., Jebasingh T., Venugopal M.N., Usha R.;
RT   "High genetic diversity in the coat protein and 3 untranslated regions
RT   among geographical isolates of Cardamom mosaic virus from south India";
RL   J. Biosci. 28(5):589-595(2003).
XX
DR   MD5; a22b66a529aa1514d9637db5c1c4c821.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1028
FT                   /organism="Indian cardamom mosaic virus"
FT                   /host="cardamom"
FT                   /isolate="Vandiperiyar"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Kerala"
FT                   /tissue_type="leaves"
FT                   /db_xref="taxon:152006"
FT   CDS             <1..822
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /function="virus coat"
FT                   /db_xref="GOA:Q998T4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q998T4"
FT                   /protein_id="CAC29005.1"
FT                   /translation="APLAPMTEQAGVGSQPQPTETVNNQFGDLPPGEGGDGDGADIQWR
FT                   IPPTPKTLNHFHNPRVKGRRIWNGRIINSIAKEQFTQSSQLATTMQFEKWAESVRKSLG
FT                   TPNEGDFQIYLTSWCLWCANNGTSSEVDVNQNMEIHSGGSFSTVPISIFVEPAVQNGGL
FT                   RKIMRHLSEVTSQILAKGGKMTAWGTKRGYTQLAMIPYAFDFCVQTNGMPKTVREQLNQ
FT                   GKAAAIGSGHQRVMLLDGKVQRIKTSYERHVDTDVDEFEHGPAAESHATLY"
XX
SQ   Sequence 1028 BP; 311 A; 201 C; 241 G; 275 T; 0 other;
     gcaccgcttg caccaatgac ggaacaagca ggagttggta gccaaccgca accaaccgaa        60
     acagttaaca atcaatttgg cgatctgcct ccaggtgagg gtggggatgg agatggtgcg       120
     gatattcaat ggagaattcc acctacacca aagacgttga accattttca caacccacgc       180
     gttaagggta ggcgaatttg gaatggaaga atcataaata gtatcgcaaa ggagcaattc       240
     acacaatcat ctcaactcgc cacaacaatg caattcgaaa aatgggctga aagtgtcagg       300
     aaaagtcttg gaactccaaa tgaaggtgac ttccaaattt atttaacatc gtggtgcctc       360
     tggtgtgcaa ataatggaac gtcctcagaa gttgatgtga atcagaatat ggaaattcac       420
     tcaggtggct cattttcaac agttccgata tcaatttttg ttgaaccagc agttcagaat       480
     ggagggctta ggaagatcat gcggcacctt agtgaagtta cctcacaaat acttgcaaaa       540
     gggggaaaga tgacagcatg gggaactaag agaggttaca cgcagcttgc aatgattccc       600
     tatgcttttg atttttgtgt tcaaacaaat gggatgccaa agacggttcg tgaacaactg       660
     aatcaaggaa aagcagcagc aattggatcc ggacaccagc gcgtcatgct gcttgatgga       720
     aaagtgcagc gtattaaaac gagttatgag agacatgtcg acactgatgt tgacgagttt       780
     gaacatggac ctgctgctga atcacacgca acattgtatt agtcataact ttatgctatt       840
     actttgtgtt cactactttt aagctgtttt attatttctt ttaataacgt tttgcactta       900
     caagttcaat gggagttttt gtgggttttc tcccaacgct tggcaaccct cagtgcagta       960
     gctaaggttg ctctggatga gcatctggca acatgtgatg ttgtttatcc tattaccata      1020
     gaaggtgt                                                               1028
//