ID   AJ307033; SV 1; linear; genomic RNA; STD; VRL; 1625 BP.
XX
AC   AJ307033;
XX
DT   05-FEB-2002 (Rel. 70, Created)
DT   05-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Onion yellow dwarf virus genomic RNA for partial viral polyprotein, isolate
DE   Xixia
XX
KW   coat protein; NIb protein; polyprotein.
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1625
RA   Adams M.J.;
RT   ;
RL   Submitted (09-MAY-2001) to the INSDC.
RL   Adams M.J., Plant Pathogen Interactions Division, IACR-Rothamsted,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s705-002-8330-y.
RX   PUBMED; 11890533.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Characterisation of some carla- and potyviruses from bulb crops in China.
RT   Brief report";
RL   Arch. Virol. 147(2):419-428(2002).
XX
DR   MD5; 24c4af382d7237c1bf246eff3b96b2a8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1625
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="garlic"
FT                   /isolate="Xixia"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Henan"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1410
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q8UZ25"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8UZ25"
FT                   /protein_id="CAC85171.1"
FT                   /translation="GNNSGQPSTVVDNTIMVMLSVQYALRKCGIVLDKQAEINKYFCNG
FT                   DDLLIAIHPEYENILDKFQQYFHELGLDYDFSSRSRSKEDVYFMSHRGLLRDGLYIPKL
FT                   DKERVVSILEWDRADKPEHRLEAICASMIEAWGYPDLLHEIRKFYQWLLEQAPYNVIAQ
FT                   SGKAPYIAETALKKLFTNIDASEVELEKYFEVYMDLENEEATPKEVRYQAGEGEDAAAQ
FT                   SSTSQQVTKQKDKDVDTGTTGTFAIPRIKALSDKMRFPRVGKIVVLNAEHLLAYKPEQI
FT                   ELYNTRSTRQQFENWYNAIKKDYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDG
FT                   DEQVEYPLAPIVDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLA
FT                   RYAFDFYEMTSKTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADIN
FT                   KNQHTLLGIKM"
FT   mat_peptide     <1..636
FT                   /product="NIb protein"
FT   mat_peptide     637..1407
FT                   /product="coat protein"
FT   3'UTR           1411..1625
XX
SQ   Sequence 1625 BP; 551 A; 277 C; 378 G; 419 T; 0 other;
     gggaataaca gtgggcagcc atccactgtt gttgataaca caattatggt gatgttgagt        60
     gtgcagtacg ccttgcggaa atgtggcata gtgttagaca aacaagcaga aatcaacaaa       120
     tacttttgta atggcgatga cttattaatt gcaatacatc cagagtacga gaacatactt       180
     gataaatttc aacagtactt ccacgaactt ggcttagatt atgacttctc aagtaggagt       240
     aggtcgaaag aggatgtata ctttatgtca catagagggc tactcagaga cggactctat       300
     ataccgaagc tggacaaaga acgtgttgtc tcaatacttg aatgggatcg agcggataag       360
     cccgagcatc gattagaagc tatatgtgct tccatgattg aagcatgggg ttatccagat       420
     ttactacacg agattcgaaa gttttaccaa tggctcttag aacaagctcc atacaatgtg       480
     atagctcaga gtggaaaagc accttatata gcagaaacgg ctcttaaaaa gttgtttact       540
     aatatcgatg cgagcgaggt agaactggag aagtattttg aagtatatat ggatcttgag       600
     aatgaggaag caactccaaa ggaagttcgt tatcaagcgg gagaaggaga agatgcagcg       660
     gcacaatcaa gcacgtcaca acaggtcaca aaacaaaagg ataaggatgt tgacactggc       720
     accactggta cgtttgcgat tcctagaatc aaggcactat ccgataaaat gagatttcca       780
     agagttggta aaatcgttgt gctcaatgca gaacacttgt tggcatataa accagaacaa       840
     atcgaattgt acaatacaag atcaacgagg cagcaattcg agaattggta caatgcaata       900
     aagaaggatt atgatgtcaa tgatgagcag atgaaaattt tactaaatgg tttaatggtc       960
     tggtgcattg agaacggaac gtctcctaat ttatcaggaa attggactat gatggatggt      1020
     gacgagcaag tcgaatatcc attggcgccg attgtggata acgcaaaacc aacatttaga      1080
     caaataatgg cgcatttcag tgatgcagct gaagcataca ttgaatatag aaatgctaca      1140
     gaaaaatata tgccccgata tggacttcag cgaaatttaa cagaacttag tttggcacgt      1200
     tacgcattcg acttttatga gatgacttcg aaaactccta aacgagcgaa agaagcacac      1260
     atgcaaatga aggcggctgc ggttagaggg gcaactaacc gtttgtttgg cctggatggt      1320
     aacgtcaaca caacagaaga ggacacggaa agacacacag ctgcggatat caataagaac      1380
     cagcacacgt tgcttggtat taaaatgtga aaccgcgttg gtgtctttag ttttatatat      1440
     atatatagtt atataaaaac gtatgtaata tgtaattctc ttcatttcgt ttaatctgac      1500
     ttcgagcaac gaaatgtggc gtaccactag ttgtggcgaa cgatacggtt aaacatctgt      1560
     gattaatgtt gaatttcatg agagtgatgt atcacgaggt gaactttagc gtgaattacg      1620
     gagac                                                                  1625
//