ID AJ306718; SV 1; linear; genomic RNA; STD; VRL; 7550 BP. XX AC AJ306718; XX DT 05-FEB-2002 (Rel. 70, Created) DT 03-JUN-2002 (Rel. 72, Last updated, Version 2) XX DE Oat mosaic virus genomic RNA for viral polyprotein, RNA1 XX KW 14kDa protein 6K2; 7kDa protein 6K1; CI protein; coat protein; KW NIa-Pro protein; NIa-Vpg protein; NIb protein; P3 protein; polyprotein. XX OS Oat mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-7550 RA Adams M.J.; RT ; RL Submitted (17-APR-2001) to the INSDC. RL Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts RL AL5 2JQ, UNITED KINGDOM. XX RN [2] RX DOI; 10.1007/s007050200013. RX PUBMED; 11958462. RA Zheng T., Chen J., Chen J.P., Adams M.J.; RT "The complete sequence of Oat mosaic virus and evidence for deletion and RT duplication in RNA2"; RL Arch. Virol. 147(3):635-642(2002). XX DR MD5; 344f3e349601225423ee4a0cf880bd9f. XX CC related entry AJ306719 XX FH Key Location/Qualifiers FH FT source 1..7550 FT /organism="Oat mosaic virus" FT /host="oats" FT /isolate="Cranbrook:laboratory isolate" FT /mol_type="genomic RNA" FT /country="United Kingdom:Kent" FT /note="RNA1" FT /db_xref="taxon:157837" FT 5'UTR 1..176 FT CDS 177..7199 FT /product="polyprotein" FT /db_xref="GOA:Q8UZ27" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8UZ27" FT /protein_id="CAC84680.1" FT /translation="MTSTGTFLAPETFYRNNVAKVKAIFHSNDTARVINAISGDFELVA FT FLVLSPAHLLKLEDTLRKELNFTATLMASTDASFETIAVLQTALDGFKYHFGTTTLEKG FT WFSMMTHIHDCLEESSSSAATALQEQVQKVGSLLLSGKNRIESCELSVLRLTARDFKIE FT YGLKGSYFIEHCDLPLHLKQKLCGTTPKEFSWAKSKERPLFTIPKSMKFTPESFIVFFA FT RVIPFMRNIIHTVSLMYWSCVAVVNLPTVMSFLFRRQFTKYVAASFTKRSLYFLIISIV FT AVLWIVRTHINQKAKISLQARNAPESEKKLMMLLASVVGVTYLFDYDIAETMGNCLHKI FT SRLANYLMDDYQGIASKLTQATYGLQAGDSTEEASTTLIKDMMSVTFQIVDEDEEEGVL FT EDNVGVSFRDWVATNTTAGRNMSRPLQYPVRATYALTPTNAPNIAEEMADSTNCWSMVV FT GFTGSGKSTYLPVLYSNYIARKKDRRQQILICEPTQAATENVWAGIAQNLGRAVVGRHE FT GWHKMGDHCIQVMTYGSALQCQAAEPSFIDSFDAIFLDEAHDVKEHSLVFESLCDKSGS FT VRKFYVSATPRDGTVCPSAARKYPLHEVSSVCDSYKKFISAQGQGDLLDATKHDSVLVF FT LKGRNECVKAAHAWNSAVIGEKKAFSLSSDNFATDFTALTERLKTHKIIIFTTNIIETG FT VTLNVDCVVDFGTTMRPALNLHNKTLKLESRRVTLNERKQRIGRAGRLKDGYAITCGDV FT DRTATVVSPDVVYGAALLSFVHNVPFYMNGTFESSWLEGITKMQAQTMAMFKLPIFLTR FT DLVNPDGSVAKEFLDVLKKHQFVTSDMKQAPNMRARQLFPSWASYYLLVQSMHYGEDKE FT VIPSHLRNASVPFSVSTLSKFDWAALAEACEKHRPSVVNCFRSTDEPMRVVTLQTNPTN FT ILCSIRHLKGMQRSYERLIQNNQIVRQSIGNSVTFKWFSPSKITADIDSNIRKCINNLT FT VVQTALSTMEQMLANNGQALATNDMQHKPTHIIELQASCTLDDATLASALGIFKPQQNL FT FLLFCTKGIKILYVVFALILVQLLYKLYQFWKAQSKARKETGLHETMAPDKATAVFNEI FT VQMDRATRKNANLDLIGEKAPFCFHFTDIEEMTASDIVELEGKGNKYRPREDARLMYSV FT RDEASMNEFNEKAREKRKNLARNAEPDRKKAYEKRPYYNFYDLQVDSNILEAIFYTMEG FT DEFFRTENPNKDMHSIARRLTEFLQTQPIVGRNQRKLLEETAEVVVKDNKGYAHRMEIS FT QHDSETLKHNNKGKVGYAEHNGDFRQSSEAIVGEVALEAEFGPEIEPNVVLEAATQITL FT SQVGIDVAKNVGKLTIGTFSVNCYFYHDWIVAPAHIQERSGGITIEMPDQTIHSTTDNI FT NAHGVRRFKGLDMVAIRRPSAMRPRKKLIKAFALQEATIAQMVFVDNNGVRKFTQSDWI FT RIEADSGRWSHKISTIEGMCGCPVFDVGKNRLIGIHVATNLSTKRNEFQAFTQEVVDFI FT NGPGTRVETGRWHFYRPDCGYKEGDAVFIKEQAGDDLQIINNSIVGFGSDLKGQLVQPA FT SQSTKNKFEKLFGGGNFQLIGEMNKGLIDKHIITGETDDVRDFMREHPTFAWLEDFMNE FT YAPSDLSYTAYYKDLCKYNRGKHVLTFNPTELDAATKGMIKILEDAGLKPGTLRSAQHV FT ISDIQWNTSAGPSYQGKKRDLCAHLTEEEVLDFAEVCRSEFLAGHSVGVWNGSLKAELR FT TIEKVEAQKTRVFTASPITSLMAMKFYVDDFNKAFYTTNLVAPHTVGINKFSRGWEKLH FT NKLDRPGWLHGSGDGSRFDSSIDPFFFDVVKVIRKHFMPEEHHVAIDLIYEEILNTTIC FT LANGMVIRKNVGNNSGQPSTVVDNTLVLMVAFLYAYIHKTGDVDLSLMDSRFVFVCNGD FT DNKFSISPEFNEQFGHDFSPELSELGLTYEFDEITTDICENPYMSLTMVRTPFGIGFSL FT PVERIISILQWAKRGGVLHSYLAGIAAAIESFNTPKLFKSIFSYLIWLTETHRDELLAS FT MTSTANALPIPSMLDIYQLHYGGSNIVLQASTGEKAKTGDLTATAPAPFVTHPDDEDEG FT KITRGPGQALTEVGKTWSMPKVTLKHSGPKFKIPLNKLATIPISALEHNNSIANESERK FT AWEDGVRTDLGITDDDKWYNTLIPFLGWCVNNGTTDKHKESQIMQIDNGTGSMSEVALS FT PFIIHGRINGGLRRIMRNYSDETVFLIGSKRVKMSMKFSMKHGSHVNPAYSFDFFVPRP FT WMNTQDIEISKQVRLAALGTGTYNSMLTSDTANLRKTTHHRVLDSDGHPELTP" FT mat_peptide 177..1076 FT /product="P3 protein" FT mat_peptide 1077..1274 FT /product="7kDa protein 6K1" FT mat_peptide 1275..3251 FT /product="CI protein" FT mat_peptide 3252..3620 FT /product="14kDa protein 6K2" FT mat_peptide 3621..4184 FT /product="NIa-VPg protein" FT mat_peptide 4185..4832 FT /product="NIa-Pro protein" FT mat_peptide 4833..6416 FT /product="NIb protein" FT mat_peptide 6417..7196 FT /product="coat protein" FT 3'UTR 7200..7550 XX SQ Sequence 7550 BP; 2126 A; 1826 C; 1683 G; 1915 T; 0 other; aaaataacac gtcccgacca cacatgaacc gaaccaacct caagcgatca tatcatgcaa 60 cgcctaaaag ctttgcaacc tctccttaat tggactccga caactcctcg atttgcgtca 120 tctgatcgct caagcctttg cgctttgcta gacgaaagaa gtggaatttc agcacgatga 180 cttccaccgg aactttccta gcccctgaga ccttctaccg taacaatgtg gccaaggtta 240 aagccatatt ccatagcaat gacaccgcac gtgttataaa tgccatatct ggtgactttg 300 agcttgtagc ttttctggtt ctcagtcccg ctcacctcct gaagctcgaa gacacattaa 360 gaaaggaact gaatttcaca gcaactctca tggcaagcac tgatgcgagc ttcgagacca 420 ttgccgtgct tcaaacagcg cttgatggct tcaagtacca ctttggaaca accactctcg 480 aaaaggggtg gttctccatg atgacacaca tccacgactg ccttgaagag agttcatcct 540 ccgctgccac cgccctccaa gagcaggtcc aaaaagtagg ctcactacta ctaagcggaa 600 aaaatcgcat cgaaagttgc gaactatctg tcttacgcct tacagcgcga gatttcaaga 660 tagaatatgg gttaaagggt tcctacttta tcgaacactg cgatttgcca ctgcacttaa 720 aacagaaact ctgtggtacc acaccaaagg agttttcctg ggcaaaaagc aaggagcgcc 780 cactattcac tataccaaag tcgatgaagt ttacgccaga aagctttatc gttttcttcg 840 ctcgggttat ccctttcatg cgtaatatca tacatacagt ctctcttatg tattggtcgt 900 gtgttgcagt tgttaaccta cctacagtca tgtccttcct ttttagacgt cagttcacca 960 agtatgttgc cgctagtttc accaagcgct cactttactt tctcatcata agtattgttg 1020 ctgttttatg gattgtacgc actcatataa accaaaaagc aaaaatatct cttcaagctc 1080 gcaatgctcc tgaaagcgag aagaaactca tgatgttact tgccagcgtt gttggtgtaa 1140 catacctctt tgattatgac attgctgaaa caatgggcaa ttgtctacac aaaatcagcc 1200 gacttgcgaa ctatctcatg gatgactacc aggggattgc ctcaaagctc acgcaagcca 1260 cctacggtct ccaagctggt gactctactg aagaggccag caccaccctc attaaggata 1320 tgatgtctgt aactttccag attgttgatg aggatgagga agagggtgtt ctcgaagaca 1380 atgttggagt ctcatttcgt gactgggttg ctacaaacac gaccgctggg cgcaacatgt 1440 ccaggccctt acaatatcct gtgagagcca catatgccct aaccccaacc aacgctccca 1500 acatcgctga agagatggct gattccacaa attgttggtc catggttgtt ggctttactg 1560 gttcaggtaa atcaacttat cttcctgttc tttattcgaa ctacatcgcc aggaagaagg 1620 atcgccgcca gcaaattcta atctgcgaac caactcaggc tgccaccgaa aatgtttggg 1680 caggcattgc tcaaaatctc ggtagagctg ttgttggacg acacgagggg tggcacaaaa 1740 tgggtgatca ttgcatacaa gttatgacat acggttctgc gctgcagtgc caagcagccg 1800 agccaagctt cattgacagc tttgatgcca tctttttgga cgaagcccac gacgtaaagg 1860 aacactctct tgtctttgag agcctttgcg acaaatctgg ctccgttagg aagttctatg 1920 tctctgcaac accgcgggac ggcactgtct gcccaagtgc tgctaggaaa tatcctctac 1980 atgaagtttc aagcgtgtgt gattcttaca agaagttcat cagcgcacag ggtcagggtg 2040 atttgcttga tgccacaaaa catgattccg ttctcgtttt cctgaaggga aggaacgagt 2100 gcgttaaagc tgcccacgct tggaatagcg cagtcattgg ggagaagaag gcattttcac 2160 tatcaagcga taactttgcc acagacttta cagcgctcac cgagagactc aaaacacata 2220 aaatcatcat attcacaacg aacatcattg agacaggtgt tacccttaat gttgactgcg 2280 ttgttgactt tggcacaact atgcgaccag ctcttaatct ccacaacaaa actcttaagc 2340 ttgaaagcag acgcgttacc ctgaacgagc gaaagcagcg catcggaaga gctggaaggc 2400 taaaggatgg gtatgccatc acatgtggtg acgttgatag aaccgcaacc gttgtttcac 2460 cagatgttgt gtacggggct gctttgctta gtttcgtgca caacgttcct ttctacatga 2520 acgggacttt cgaaagctct tggctcgaag gcataacgaa aatgcaggca caaacgatgg 2580 caatgttcaa attacccatt ttcttgacac gcgacctagt taatcctgat ggttctgtag 2640 ccaaagagtt tctggacgtg ttgaaaaagc accagtttgt aactagtgac atgaaacaag 2700 ctccaaacat gcgcgcacgc cagctctttc catcctgggc atcgtattat ctactggtcc 2760 agtcaatgca ttacggtgag gataaggagg tgattccctc gcatctgcgc aacgctagtg 2820 ttcctttctc tgtttcaaca ctatccaaat ttgactgggc agccctcgcc gaagcctgtg 2880 agaaacatcg cccgtcggta gtgaattgtt tcagaagcac tgatgaacct atgcgtgttg 2940 taactctgca aacaaaccca acgaacattt tatgcagtat aaggcacctt aaaggcatgc 3000 agcggagtta tgaacgtctc atacaaaaca atcagatcgt taggcagtcg attggcaaca 3060 gtgtcacctt caaatggttc tcccctagca agataactgc cgacattgac tccaacatca 3120 gaaaatgtat caacaaccta acagttgtgc aaactgcttt aagcaccatg gaacagatgc 3180 ttgccaacaa tgggcaggct cttgctacaa atgacatgca acacaaacca actcacataa 3240 tagagttgca agccagctgc acgctagatg atgctactct cgcatcagct cttggaatct 3300 tcaaacctca gcaaaatctg tttcttctct tctgcaccaa agggataaag atcctttatg 3360 tagttttcgc tctgattttg gtgcagctgc tttacaaact ttaccagttc tggaaagctc 3420 agagcaaagc aaggaaggaa actggcttgc acgaaaccat ggcgccggat aaagcaactg 3480 ctgttttcaa tgaaatcgtg cagatggata gagccaccag gaaaaacgcc aatctggacc 3540 tcattggtga gaaagcacct ttttgctttc acttcactga tatagaggag atgactgcga 3600 gcgacatcgt tgagctcgaa gggaagggca acaaatatcg accacgcgag gacgcacgcc 3660 tcatgtactc agtgagggac gaagctagca tgaacgaatt taacgagaaa gctcgtgaaa 3720 agaggaagaa ccttgcacgt aatgcagagc cggatcgcaa gaaagcatat gaaaagcgcc 3780 cctactacaa cttttacgat ctccaagttg atagcaatat actggaagcc attttctaca 3840 ccatggaagg tgatgagttc ttccgcactg agaacccaaa caaagacatg cattccatcg 3900 ccaggcgctt aactgaattc ttacaaacgc agcccattgt tggcaggaat cagcgcaagc 3960 ttctcgagga aaccgcagaa gttgttgtca aggacaacaa aggatatgct caccgcatgg 4020 aaatctccca gcacgattca gaaactctga aacacaacaa caaggggaaa gttggctatg 4080 cggagcacaa cggtgacttt cgccagagca gcgaagcaat tgtcggtgaa gtggctttag 4140 aagctgagtt tggtcctgag atcgagccaa acgtggttct tgaggccgcc acacaaatca 4200 ctctttccca agtcggcatt gatgttgcaa agaacgtcgg caagttaacc attggcacat 4260 tctcggttaa ctgctatttc tatcatgatt ggattgtggc cccagcacac attcaggagc 4320 gctctggtgg catcaccata gagatgccag atcaaaccat acatagcaca actgataaca 4380 tcaatgcaca tggtgtgcgc agattcaagg gccttgacat ggttgccatt cggcgcccaa 4440 gtgctatgag accacgaaag aagctcatta aggcatttgc tctccaagaa gctaccattg 4500 ctcaaatggt ctttgttgac aacaatggtg tgcgtaagtt cacccagtcg gactggatca 4560 gaattgaggc agactctgga cgatggtctc acaagatctc aactatcgag ggcatgtgcg 4620 gatgccctgt ctttgatgtt gggaagaaca ggctcattgg aatccacgtt gcaacaaact 4680 tgtcaactaa gagaaatgag ttccaggcct tcacccagga ggttgttgat ttcatcaacg 4740 ggcctggaac tcgtgttgaa accggtagat ggcattttta ccgccccgat tgtggttaca 4800 aggaaggcga cgcagttttc atcaaggaac aggctggaga cgatttacaa atcataaata 4860 attccatcgt tggttttggt agcgatctca aaggacagct tgttcaacca gcgtctcaat 4920 caactaagaa caaatttgag aaattgtttg gcggtggaaa tttccagcta attggtgaga 4980 tgaataaggg cctcattgac aaacatatca tcacaggcga aaccgacgac gtccgcgatt 5040 ttatgaggga acatcccact ttcgcttggc ttgaggactt catgaatgaa tatgcaccaa 5100 gtgatctgtc atacactgca tattacaaag acctctgcaa atacaatcgt ggcaagcacg 5160 tgctaacctt caaccccacc gagcttgacg cagcaaccaa aggaatgatt aagattcttg 5220 aggacgctgg actaaagcca ggaactttgc gctcagcaca gcatgttatc tcggacatcc 5280 aatggaacac ttctgcagga cctagttatc aaggaaagaa acgcgatcta tgcgcacact 5340 taactgagga ggaggttttg gactttgcgg aggtttgtcg tagcgagttc ttggctggac 5400 actctgttgg cgtgtggaat ggttctctta aagctgaact tcgaacaatt gagaaagttg 5460 aggctcagaa aacgcgtgtt ttcacagcct cacccatcac cagcttaatg gccatgaagt 5520 tctatgtgga tgattttaac aaagcctttt acacaacgaa tctcgttgct ccacataccg 5580 ttggcataaa taagtttagc cgtggttggg aaaaattgca caacaagctg gacagaccag 5640 gatggctaca cgggagcggc gatggttcac gtttcgacag ttccattgat ccattcttct 5700 ttgatgttgt taaggtgatt cggaaacatt tcatgcctga agaacatcat gtagctattg 5760 atctcattta tgaggagatc ttgaacacca caatatgcct tgcgaatggc atggttattc 5820 gaaagaatgt tggcaacaat agtgggcagc ctagcaccgt tgtcgacaac actctcgtgc 5880 tcatggtggc tttcctgtac gcatatatcc acaaaactgg tgatgtggat ctctcactca 5940 tggacagcag atttgttttc gtctgcaatg gtgatgataa caagttctct atttcgccag 6000 aattcaatga gcaatttggt cacgatttct cccctgaact ctcagagctt ggtcttactt 6060 acgagtttga tgagatcaca actgacatat gtgaaaatcc ctacatgtcc ctgaccatgg 6120 tacgaactcc ttttggaatt ggtttctcgc tccctgttga gagaatcatt tccatactgc 6180 agtgggctaa gaggggcggc gttctccatt catatttggc cggcatcgcc gctgccattg 6240 aatcgttcaa cacgcccaaa ctcttcaagt ccattttctc gtacctcatc tggctcacag 6300 agacacaccg cgatgagcta cttgcctcga tgacttccac tgcaaacgct ttgccaatac 6360 catcaatgct tgatatatat caactgcatt atggaggaag caacatcgtt ctgcaagcat 6420 caactggcga gaaggctaaa acgggtgatc tcactgcaac agcgcctgca ccttttgtca 6480 ctcatcccga tgatgaggat gaagggaaaa taactagagg accaggccag gcactgactg 6540 aggttggcaa aacctggtcc atgccaaagg tgactctgaa acactctggt cccaaattca 6600 aaattcctct caacaaattg gccactatac caataagcgc tcttgaacat aacaattcta 6660 tagccaatga gtctgagagg aaagcatggg aagatggcgt tagaaccgat cttggaatca 6720 ctgatgatga caagtggtac aacactctga tccccttcct cggatggtgc gtcaataatg 6780 gcactaccga caagcataaa gaaagccaaa taatgcaaat agacaatgga acaggatcaa 6840 tgtctgaagt tgcactatcc ccatttatta tacatggaag aataaatgga gggctccgaa 6900 gaataatgag aaattatagc gatgagacgg ttttcctcat cgggagcaaa agagtaaaaa 6960 tgtcgatgaa attttcgatg aaacacggat cccatgtcaa ccctgcatat tcgtttgatt 7020 tctttgtccc tcgtccttgg atgaacacac aggacattga gatctcaaag caggtccgtc 7080 ttgcagcact tggaactggc acgtataaca gcatgttaac gtccgacact gccaacttgc 7140 gcaaaacaac ccaccacagg gttctggatt ctgatggaca tccagagctt acaccttaag 7200 ccatcacccc tcgccctata gccaccataa ccgcctattt aacgcacccc attgtcatcc 7260 cacgcaatgt cctggttcgt atcaatgctg gtgccacggt ttcaccccct tcttaaggga 7320 ggctgctgca cccacgttgg ttttactttt ctgcaaggtt ctggttcgcg ctgtagtgct 7380 tggaacggtt ctattcgcta tacgtcatgc tgctcacgaa gccagtttat ggttttgcta 7440 gtagcttggc ggttgcctat ccatctggct aggctaggga agccgtttta accatccgtc 7500 gttggatggt ggtgtgctgc aatacacatt tacgagtacc agtaggtaat 7550 //