ID   AJ304456; SV 1; circular; genomic DNA; STD; VRL; 1821 BP.
XX
AC   AJ304456;
XX
DT   07-AUG-2001 (Rel. 68, Created)
DT   07-AUG-2001 (Rel. 68, Last updated, Version 1)
XX
DE   Goose circovirus complete genome
XX
KW   ORFc1; ORFc2; ORFV2; rep gene; replication associated protein.
XX
OS   Goose circovirus
OC   Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes;
OC   Cirlivirales; Circoviridae; Circovirus; Circovirus goose.
XX
RN   [1]
RP   1-1821
RA   Weston J.H.;
RT   ;
RL   Submitted (13-DEC-2000) to the INSDC.
RL   Weston J.H., Veterinary Sciences, The Queen's University of Belfast, Stoney
RL   Road, Belfast, Northern Ireland, UK, BT4 3SD, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1006/viro.2001.0985.
RX   PUBMED; 11485403.
RA   Todd D., Weston J.H., Soike D., Smyth J.A.;
RT   "Genome sequence determinations and analyses of novel circoviruses from
RT   goose and pigeon";
RL   Virology 286(2):354-362(2001).
XX
DR   MD5; cc9767e64d9fdbe29e63139811935a61.
DR   EuropePMC; PMC2812408; 20007276.
DR   EuropePMC; PMC3133700; 21177928.
DR   EuropePMC; PMC3198713; 21978576.
DR   EuropePMC; PMC3647419; 23628223.
DR   EuropePMC; PMC506959; 15308722.
DR   EuropePMC; PMC5165205; 27795441.
DR   EuropePMC; PMC6160883; 30078831.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1821
FT                   /organism="Goose circovirus"
FT                   /host="Anser sp."
FT                   /mol_type="genomic DNA"
FT                   /country="Germany"
FT                   /db_xref="taxon:146032"
FT   CDS             join(1613..1821,1..154)
FT                   /product="hypothetical protein"
FT                   /note="ORFV2"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q91EK4"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAC50260.1"
FT                   /translation="MFCVCLTLKIVYFDLIRPMCSLRRLYRRLRLVARLRREYRLRGLA
FT                   RYSGMMGSGFLWAGTKPLQAPYILLPAPVLRTPHPTRKLQTPLNEPPRTWRKTATTHTR
FT                   GGSSLLITLPLKITVP"
FT   CDS             73..954
FT                   /gene="rep"
FT                   /product="putative replication associated protein"
FT                   /db_xref="GOA:Q91EK3"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q91EK3"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAC50261.1"
FT                   /translation="MAKNGNYSYKRWVFTINNPTFEDYCAVVEFCNLDNCKFAIVGEEK
FT                   GEKEGTPHLQGFLSLRKNAKAAALEENLGGRAWLSRARGSDEDNEEYCSKESTYLRVGE
FT                   PNRKGRSSDLPDAASDVLAGLPITDVARKYPTTYVMFGRGLERLRQLIVETARDWKTEV
FT                   IVLIGRPGSGKSRYAFEFPAREKYYKSRGKWWDGYNGQDVVVMDDFYGWLPYDDLLRIC
FT                   DRYPLRVEYKGGMTQFVAKTLIITSNREPRDWYKCEFDVSALYRRINQYLILTPDGYAP
FT                   APEFMLPFKINY"
FT   CDS             complement(128..427)
FT                   /product="hypothetical protein"
FT                   /function="unknown"
FT                   /note="ORFC2"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q91EK2"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAC50262.1"
FT                   /translation="MPRRGDHLSDLFGLVHRLEGMSTLWNNILHYLRQIPELETARLFL
FT                   PGSLQAQQLSHSFADSGIPAGEVCLLSLLSLRRLSRTCSYPDCRTQLRHSNLQR"
FT   CDS             complement(1009..1761)
FT                   /product="capsid"
FT                   /note="ORFC1"
FT                   /db_xref="GOA:Q91EK1"
FT                   /db_xref="InterPro:IPR003383"
FT                   /db_xref="InterPro:IPR038652"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q91EK1"
FT                   /func_characterised="identical sequence"
FT                   /protein_id="CAC50263.1"
FT                   /translation="MPLYRARPRSLYSRRRRATNRRRRYRRRRLHIGRIRSKYTIFNVK
FT                   QTQNISFTFFGTGSPDKNKWQAMSLEAVQSSGTSPKPGINLRFAVFGDRLPGTGNQYHY
FT                   PFDYYMIRMVKVELRPAFNPFQRVRTQGSTYIDKEGNITTTTSGGEWNVDPYAAMSSRK
FT                   TWSPHRYHKRVFVPKPTIQQGGTGTNIWSTWYTPGGRQLWLNSIQDNVVFYGMGMSLRQ
FT                   AEDTAAPLTVEATITYYIRFGQWTGLSP"
XX
SQ   Sequence 1821 BP; 405 A; 393 C; 503 G; 520 T; 0 other;
     accggcgcct gtactccgta ctccgcaccc tacgaggaag ctgcagacac cgcttaacga        60
     gccaccccga acatggcgaa aaacggcaac tactcataca agaggtgggt cttcactatt       120
     aataacccta cctttgaaga ttactgtgcc gtagttgagt tctgcaatct ggataactgc       180
     aagttcgcga tagtcggcga agagaaagga gagaaagaag gcacacctca cctgcaggga       240
     ttcctgagtc tgcgaaagaa tgcgaaagct gctgcgcttg aagagaacct gggaggaaga       300
     gcctggctgt ctcgagctcg gggatctgac gaagataatg aagaatattg ttccaaagag       360
     tcgacatacc ttcgagtcgg tgaaccaaac cgaaaaggtc gctcaagtga tctccccgac       420
     gcggcatccg atgtgctcgc tggtctgccg ataactgacg tggcccggaa gtacccgacg       480
     acttatgtaa tgtttgggcg gggcttagag cggttgcgtc agctgatcgt ggagaccgct       540
     cgtgattgga agacggaggt catcgttctg attgggcggc ctggaagcgg gaagagccgt       600
     tacgcgtttg aatttcccgc gcgtgaaaag tattataaat ctcgcgggaa gtggtgggat       660
     ggctataatg ggcaggatgt ggttgtcatg gatgattttt atgggtggct gccttacgat       720
     gaccttttaa ggatctgtga tcgctatcct ttaagggtag agtacaaggg aggtatgacc       780
     cagttcgttg ctaagacact tataattacc tctaataggg agccgcgtga ttggtataaa       840
     tgcgagtttg atgtgtctgc attgtatcgg agaattaatc agtacctgat attaaccccc       900
     gacggatatg cacccgcccc cgagtttatg ctgccgttta aaataaacta ctaaagtcct       960
     ggttaaggtt agaaacagga acgtttattg tgtaaaatta caataaagtt atggtgaaag      1020
     cccagtccat tgtccgaatc ttatgtaata ggtaatggtt gcttctactg tcagaggtgc      1080
     tgcggtgtct tctgcttgtc ttagtgacat gcccattccg tagaatacta cgttgtcttg      1140
     aattgagttc agccatagtt gtcttcctcc tggggtgtac caggtgctcc atatatttgt      1200
     tcctgttcct ccctgttgga tggttggttt cgggacaaat actcttttgt ggtatctgtg      1260
     aggtgaccac gttttcctgg agctcattgc tgcgtagggg tctacgttcc actctccacc      1320
     gctggttgtg gttgtaatgt tgccttcttt gtctatgtat gtgctgcctt gtgtgcgtac      1380
     tctttggaag gggttaaatg cgggacggag ttccaccttt accatgcgta tcatgtagta      1440
     gtcgaacggg taatggtatt ggtttcctgt tcctggcaat ctgtctccga agactgcgaa      1500
     ccgtaggtta attccgggtt tggggctggt gccagatgat tgtactgctt ccaggctcat      1560
     tgcttgccat ttgtttttgt ctgggcttcc ggttccgaag aacgtgaatg atatgttctg      1620
     cgtttgtttg acattgaaga ttgtgtactt tgaccttatt cgtccgatgt gtagccttcg      1680
     tcgtctgtat cgtcgtctgc ggttggttgc ccgcctacga cgagaatata gactccgcgg      1740
     tctcgcgcga tacagcggca tgatgggcag tggcttcctg tgggcgggga caaaaccgtt      1800
     acaggcgccg tatatattat t                                                1821
//