Dbfetch
ID AJ304456; SV 1; circular; genomic DNA; STD; VRL; 1821 BP. XX AC AJ304456; XX DT 07-AUG-2001 (Rel. 68, Created) DT 07-AUG-2001 (Rel. 68, Last updated, Version 1) XX DE Goose circovirus complete genome XX KW ORFc1; ORFc2; ORFV2; rep gene; replication associated protein. XX OS Goose circovirus OC Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; OC Cirlivirales; Circoviridae; Circovirus; Circovirus goose. XX RN [1] RP 1-1821 RA Weston J.H.; RT ; RL Submitted (13-DEC-2000) to the INSDC. RL Weston J.H., Veterinary Sciences, The Queen's University of Belfast, Stoney RL Road, Belfast, Northern Ireland, UK, BT4 3SD, UNITED KINGDOM. XX RN [2] RX DOI; 10.1006/viro.2001.0985. RX PUBMED; 11485403. RA Todd D., Weston J.H., Soike D., Smyth J.A.; RT "Genome sequence determinations and analyses of novel circoviruses from RT goose and pigeon"; RL Virology 286(2):354-362(2001). XX DR MD5; cc9767e64d9fdbe29e63139811935a61. DR EuropePMC; PMC2812408; 20007276. DR EuropePMC; PMC3133700; 21177928. DR EuropePMC; PMC3198713; 21978576. DR EuropePMC; PMC3647419; 23628223. DR EuropePMC; PMC506959; 15308722. DR EuropePMC; PMC5165205; 27795441. DR EuropePMC; PMC6160883; 30078831. XX FH Key Location/Qualifiers FH FT source 1..1821 FT /organism="Goose circovirus" FT /host="Anser sp." FT /mol_type="genomic DNA" FT /country="Germany" FT /db_xref="taxon:146032" FT CDS join(1613..1821,1..154) FT /product="hypothetical protein" FT /note="ORFV2" FT /db_xref="UniProtKB/Swiss-Prot:Q91EK4" FT /func_characterised="identical sequence" FT /protein_id="CAC50260.1" FT /translation="MFCVCLTLKIVYFDLIRPMCSLRRLYRRLRLVARLRREYRLRGLA FT RYSGMMGSGFLWAGTKPLQAPYILLPAPVLRTPHPTRKLQTPLNEPPRTWRKTATTHTR FT GGSSLLITLPLKITVP" FT CDS 73..954 FT /gene="rep" FT /product="putative replication associated protein" FT /db_xref="GOA:Q91EK3" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR003365" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/Swiss-Prot:Q91EK3" FT /func_characterised="identical sequence" FT /protein_id="CAC50261.1" FT /translation="MAKNGNYSYKRWVFTINNPTFEDYCAVVEFCNLDNCKFAIVGEEK FT GEKEGTPHLQGFLSLRKNAKAAALEENLGGRAWLSRARGSDEDNEEYCSKESTYLRVGE FT PNRKGRSSDLPDAASDVLAGLPITDVARKYPTTYVMFGRGLERLRQLIVETARDWKTEV FT IVLIGRPGSGKSRYAFEFPAREKYYKSRGKWWDGYNGQDVVVMDDFYGWLPYDDLLRIC FT DRYPLRVEYKGGMTQFVAKTLIITSNREPRDWYKCEFDVSALYRRINQYLILTPDGYAP FT APEFMLPFKINY" FT CDS complement(128..427) FT /product="hypothetical protein" FT /function="unknown" FT /note="ORFC2" FT /db_xref="UniProtKB/Swiss-Prot:Q91EK2" FT /func_characterised="identical sequence" FT /protein_id="CAC50262.1" FT /translation="MPRRGDHLSDLFGLVHRLEGMSTLWNNILHYLRQIPELETARLFL FT PGSLQAQQLSHSFADSGIPAGEVCLLSLLSLRRLSRTCSYPDCRTQLRHSNLQR" FT CDS complement(1009..1761) FT /product="capsid" FT /note="ORFC1" FT /db_xref="GOA:Q91EK1" FT /db_xref="InterPro:IPR003383" FT /db_xref="InterPro:IPR038652" FT /db_xref="UniProtKB/Swiss-Prot:Q91EK1" FT /func_characterised="identical sequence" FT /protein_id="CAC50263.1" FT /translation="MPLYRARPRSLYSRRRRATNRRRRYRRRRLHIGRIRSKYTIFNVK FT QTQNISFTFFGTGSPDKNKWQAMSLEAVQSSGTSPKPGINLRFAVFGDRLPGTGNQYHY FT PFDYYMIRMVKVELRPAFNPFQRVRTQGSTYIDKEGNITTTTSGGEWNVDPYAAMSSRK FT TWSPHRYHKRVFVPKPTIQQGGTGTNIWSTWYTPGGRQLWLNSIQDNVVFYGMGMSLRQ FT AEDTAAPLTVEATITYYIRFGQWTGLSP" XX SQ Sequence 1821 BP; 405 A; 393 C; 503 G; 520 T; 0 other; accggcgcct gtactccgta ctccgcaccc tacgaggaag ctgcagacac cgcttaacga 60 gccaccccga acatggcgaa aaacggcaac tactcataca agaggtgggt cttcactatt 120 aataacccta cctttgaaga ttactgtgcc gtagttgagt tctgcaatct ggataactgc 180 aagttcgcga tagtcggcga agagaaagga gagaaagaag gcacacctca cctgcaggga 240 ttcctgagtc tgcgaaagaa tgcgaaagct gctgcgcttg aagagaacct gggaggaaga 300 gcctggctgt ctcgagctcg gggatctgac gaagataatg aagaatattg ttccaaagag 360 tcgacatacc ttcgagtcgg tgaaccaaac cgaaaaggtc gctcaagtga tctccccgac 420 gcggcatccg atgtgctcgc tggtctgccg ataactgacg tggcccggaa gtacccgacg 480 acttatgtaa tgtttgggcg gggcttagag cggttgcgtc agctgatcgt ggagaccgct 540 cgtgattgga agacggaggt catcgttctg attgggcggc ctggaagcgg gaagagccgt 600 tacgcgtttg aatttcccgc gcgtgaaaag tattataaat ctcgcgggaa gtggtgggat 660 ggctataatg ggcaggatgt ggttgtcatg gatgattttt atgggtggct gccttacgat 720 gaccttttaa ggatctgtga tcgctatcct ttaagggtag agtacaaggg aggtatgacc 780 cagttcgttg ctaagacact tataattacc tctaataggg agccgcgtga ttggtataaa 840 tgcgagtttg atgtgtctgc attgtatcgg agaattaatc agtacctgat attaaccccc 900 gacggatatg cacccgcccc cgagtttatg ctgccgttta aaataaacta ctaaagtcct 960 ggttaaggtt agaaacagga acgtttattg tgtaaaatta caataaagtt atggtgaaag 1020 cccagtccat tgtccgaatc ttatgtaata ggtaatggtt gcttctactg tcagaggtgc 1080 tgcggtgtct tctgcttgtc ttagtgacat gcccattccg tagaatacta cgttgtcttg 1140 aattgagttc agccatagtt gtcttcctcc tggggtgtac caggtgctcc atatatttgt 1200 tcctgttcct ccctgttgga tggttggttt cgggacaaat actcttttgt ggtatctgtg 1260 aggtgaccac gttttcctgg agctcattgc tgcgtagggg tctacgttcc actctccacc 1320 gctggttgtg gttgtaatgt tgccttcttt gtctatgtat gtgctgcctt gtgtgcgtac 1380 tctttggaag gggttaaatg cgggacggag ttccaccttt accatgcgta tcatgtagta 1440 gtcgaacggg taatggtatt ggtttcctgt tcctggcaat ctgtctccga agactgcgaa 1500 ccgtaggtta attccgggtt tggggctggt gccagatgat tgtactgctt ccaggctcat 1560 tgcttgccat ttgtttttgt ctgggcttcc ggttccgaag aacgtgaatg atatgttctg 1620 cgtttgtttg acattgaaga ttgtgtactt tgaccttatt cgtccgatgt gtagccttcg 1680 tcgtctgtat cgtcgtctgc ggttggttgc ccgcctacga cgagaatata gactccgcgg 1740 tctcgcgcga tacagcggca tgatgggcag tggcttcctg tgggcgggga caaaaccgtt 1800 acaggcgccg tatatattat t 1821 //