ID   AJ304399; SV 1; linear; genomic RNA; STD; VRL; 2204 BP.
XX
AC   AJ304399;
XX
DT   06-JAN-2003 (Rel. 74, Created)
DT   06-JAN-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Cucumber mosaic virus 3a gene for movement protein and CP gene for coat
DE   protein, isolate IPO, genomic RNA 3
XX
KW   3A gene; coat protein; cp gene; movement protein.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2204
RA   Chen Y.K.;
RT   ;
RL   Submitted (21-NOV-2000) to the INSDC.
RL   Chen Y.K., Lab. of Virology, Dept. of Plant Sciences, Wageningen
RL   University, Binnenhaven 11, Wageningen, 6709 PD, NETHERLANDS.
XX
RN   [2]
RX   DOI; 10.1128/JVI.76.8.4119-4124.2002.
RX   PUBMED; 11907253.
RA   Chen Y.K., Goldbach R., Prins M.;
RT   "Inter- and intramolecular recombinations in the cucumber mosaic virus
RT   genome related to adaptation to alstroemeria";
RL   J. Virol. 76(8):4119-4124(2002).
XX
DR   MD5; 1952e0345c8014d20e92424171f97aeb.
DR   EuropePMC; PMC136112; 11907253.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2204
FT                   /organism="Cucumber mosaic virus"
FT                   /host="Alstroemeria"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /strain="ALS"
FT                   /isolate="IPO"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             97..936
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q8AZL4"
FT                   /protein_id="CAC80011.1"
FT                   /translation="MAFQGTSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLKIYLADLGDKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE
FT                   RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK
FT                   SQLNNVSSSRYLLPNVALNQNASGHESEILNESPPIAIGSPSASRNNSFRSQVVNGL"
FT   CDS             1227..1883
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8QXZ2"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QXZ2"
FT                   /protein_id="CAC80012.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLRLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLG
FT                   SRIQIRINPLPKFDSTVWVTVRKGPSSSDLSVAAISAMFGDGNSPGLVYQYAASGVKAT
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 2204 BP; 499 A; 517 C; 528 G; 660 T; 0 other;
     gtaatcttac cactttcttt ccacgtcgtg tcgcgtcagt ccacgctgtg tgtgtgtgtg        60
     tgttagttag tgtgtcgtgt ctagattacg aaggttatgg cttttcaagg taccagtagg       120
     acgttaactc aacagtcctc ggcggcgtcg tctgacgact tacagaagat attattcagc       180
     cccgatgcca tcaagaagat ggctactgag tgtgacctag gtcgacatca ttggatgcgc       240
     gcggataacg ccatctctgt cagacctctc gttccccaag taaccagtaa caatttattg       300
     tctttcttta aatctgggta tgatgccggt gaattgcgct ctaaaggcta tatgagcgtt       360
     cctcaagtgc tgtgtgccgt taccaggacg gtttctacgg atgctgaggg ttctttgaaa       420
     atttatttgg ctgacctagg tgataaagaa ttatccccaa ttgatgggca gtgtgttact       480
     ttacataatc atgagctccc tgctttgata tctttccaac ctacctacga ttgccccatg       540
     gaattagttg gcaatcggca tcgatgtttc gcggtagtcg ttgagagaca tggttatatt       600
     ggttacggtg gaaccactgc tagcgtgtgt agtaactggc aagctcagtt ttcttcaaag       660
     aataataatt acacacacgc cgctgctggt aagactcttg tgttgcctta caacagatta       720
     gctgagcatt cgaaaccgtc agccgttgct cgcctgttga agtcgcagtt aaacaacgtt       780
     agctcatcgc gctatctttt gccgaacgtt gctcttaatc aaaatgcgtc tgggcacgag       840
     tccgagattt taaacgaaag ccctcccatc gctataggga gtccgtccgc gtcccgtaac       900
     aatagcttca gatcgcaggt ggttaacggt ctttagtgtt ttgttacgtt gtacccatgt       960
     atatatatac tacgtttatc ttccgtacgt aaatacatgt gagtctagag tcccgtgtga      1020
     gttgtaacgg tagacatctg tgacgcgaag ccgcttgaag atttcccatc tggggttagt      1080
     aagtccacat cacagtttta aggttcaatt ccttttgctc cctgttgggc cccttacttt      1140
     ctcatggatg cttctccgcg agttagcgtt tagttgttca cctgagtcgt gtgtgttttg      1200
     ttttattttc gcgtcttagt gtgcctatgg acaaatctgg atctcccaat gctagtagaa      1260
     cctcccggcg tcgtcgcccg cgtagaggtt ctcggtccgc ttctggtgcg gatgcagggt      1320
     tgcgtgcttt gactcagcag atgctgagac tcaataaaac cctcgccatt ggtcgtccca      1380
     ctcttaacca cccaaccttc gtgggtagtg aaagctgtaa acccggttac actttcacat      1440
     ctattaccct gaaaccgcct gaaattgaga aaggttcata ttttggtaga aggttgtctt      1500
     tgccagattc agtcacggac tatgataaga agcttggttc gcgcattcaa atcaggatta      1560
     atcctttgcc gaaatttgat tctaccgtgt gggttacagt tcggaaagga ccttcatcat      1620
     ccgatctttc cgtcgccgcc atctctgcta tgtttggcga tggtaattca ccgggtttgg      1680
     tttatcagta tgctgcgtcc ggagttaagg ccaccaataa gttactttat gacctgtccg      1740
     agatgcgtgc tgatatcggc gacatgcgta agtacgccgt cctggtttac tcgaaagacg      1800
     ataaactaga gaaggacgag attgtacttc atgtcgacgt cgagcatcaa cgaattccta      1860
     tctcacggat gctcccgact tagtccgtgt gtttaccggc gtccgaagac gttaaactac      1920
     actctcaatc gcgagtgctg agttggtagt attgctccaa actgcctgaa gtccctaaac      1980
     gtgttgttgc gcggggaacg ggttgtccat ccagcttacg gctaaaatgg tcagtcgtgt      2040
     ctttcacacg ccgatgtctt acaagatgtc gaggtaccct tgaaatcatc tcctagattt      2100
     cttcggaagg gcttcgtgag aagctcgtgc acggtaatac actgatatta ccaagagtgc      2160
     gggtatcgcc tgtggttttc cacaggttct ccataaggag acca                       2204
//