ID AJ304398; SV 1; linear; genomic RNA; STD; VRL; 2419 BP. XX AC AJ304398; XX DT 06-JAN-2003 (Rel. 74, Created) DT 06-JAN-2003 (Rel. 74, Last updated, Version 1) XX DE Cucumber mosaic virus 3a gene for movement protein and CP gene for coat DE protein, isolate NAK, genomic RNA 3 XX KW 3A gene; coat protein; cp gene; movement protein. XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-2419 RA Chen Y.K.; RT ; RL Submitted (21-NOV-2000) to the INSDC. RL Chen Y.K., Lab. of Virology, Dept. of Plant Sciences, Wageningen RL University, Binnenhaven 11, Wageningen, 6709 PD, NETHERLANDS. XX RN [2] RX DOI; 10.1128/JVI.76.8.4119-4124.2002. RX PUBMED; 11907253. RA Chen Y.K., Goldbach R., Prins M.; RT "Inter- and intramolecular recombinations in the cucumber mosaic virus RT genome related to adaptation to alstroemeria"; RL J. Virol. 76(8):4119-4124(2002). XX DR MD5; 774c145e4a7300124ca6c0f17df4bc59. DR EuropePMC; PMC136112; 11907253. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..2419 FT /organism="Cucumber mosaic virus" FT /host="Alstroemeria" FT /lab_host="Nicotiana benthamiana" FT /strain="ALS" FT /isolate="NAK" FT /mol_type="genomic RNA" FT /db_xref="taxon:12305" FT CDS 97..936 FT /gene="3a" FT /product="movement protein" FT /db_xref="GOA:Q8AZL5" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q8AZL5" FT /protein_id="CAC80009.1" FT /translation="MAFQGTSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH FT WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE FT GSLKIYLADLGDKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE FT RHGYIGYGGTTASVCSNWQAQFFSKNNNYTHAAAGKILVLPYNRLAEHSKPSAVARLLK FT SQLNNVSSSRYLLPNVALNQNASGHESEILNESPPIAIGSPSASRNNSFRSQVVNGL" FT CDS 1224..1880 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:Q9DJW9" FT /db_xref="InterPro:IPR000247" FT /db_xref="InterPro:IPR023800" FT /db_xref="InterPro:IPR037137" FT /db_xref="UniProtKB/TrEMBL:Q9DJW9" FT /protein_id="CAC80010.1" FT /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLRLNKT FT LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLG FT SRIQIRINPLPKFDSTVWVTVRKGPSYPDLSVAAISAMFGDGNSPGLVYQYAASGVKAT FT NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT" XX SQ Sequence 2419 BP; 546 A; 568 C; 579 G; 726 T; 0 other; gtaatcttac cactttcttt ccacgtcgtg tcgcgtcagt ccacgctgtg tgtgtgtgtg 60 tgttagttag tgtgtcgtgt ctagattacg aaggttatgg cttttcaagg taccagtagg 120 acgttaactc aacagtcctc ggcggcgtcg tctgacgact tacagaagat attattcagc 180 cccgatgcca tcaagaagat ggctactgag tgtgacctag gtcgacatca ttggatgcgc 240 gcggataacg ccatctctgt cagacctctc gttccccaag taaccagtaa caatttattg 300 tccttcttta aatctgggta tgatgccggt gaattgcgct ctaaaggcta tatgagcgtt 360 cctcaagtgc tgtgtgccgt taccaggacg gtttctacgg atgctgaggg ttctttgaaa 420 atttatttgg ctgacctagg tgataaagaa ttatccccaa ttgatgggca atgtgttact 480 ttacataatc atgagctccc tgctttgata tctttccaac ctacctacga ttgccccatg 540 gaattagttg gcaatcggca tcgatgtttc gcggtagtcg ttgagagaca tggttatatt 600 ggttacggtg gtaccactgc tagcgtgtgt agtaactggc aagctcagtt tttttcaaag 660 aataataatt acacacacgc cgctgctggt aagattcttg tgttgcctta caacagatta 720 gctgagcatt cgaaaccgtc agccgttgct cgcctgttga agtcgcagtt aaacaacgtt 780 agctcatcgc gctatctttt gccgaacgtt gctcttaatc aaaatgcgtc tgggcacgag 840 tccgagattt taaacgaaag ccctcccatc gctataggga gtccgtccgc gtcccgtaac 900 aatagcttca gatcgcaggt ggttaacggt ctttagtgtt ttgttacgtt gtacctatgt 960 atatatatac tacgtttatc ttccgtatat aaatacatgt gagtctagag tcccgtgtga 1020 gttgtaacgg tagacatctg tgacgcgaag ccgcttgaag atttcccatc tggggttagt 1080 aagtccacat catagttttg agattcaatt ccttttgctc cctgttgggc ccccttactt 1140 tctcatggat gcttctccgc gagttagcgt ttagttgttc acctgagtcg tgttgtgttt 1200 tgttttcgcg tcttagtgtg cctatggaca aatctggatc tcccaatgct agtagaacct 1260 cccggcgtcg tcgcccgcgt agaggttctc ggtccgcttc tggtgcggat gcagggttgc 1320 gtgctttgac tcagcagatg ctgagactca ataaaaccct cgccattggt cgtcccactc 1380 ttaaccaccc aaccttcgtg ggtagtgaaa gctgtaaacc cggttacact ttcacatcta 1440 ttaccctgaa accgcctgaa attgagaaag gttcatattt tggtagaagg ttgtctttgc 1500 cagattcagt cacggactat gataagaagc ttggttcgcg cattcaaatc aggattaatc 1560 ctttgccgaa atttgattct accgtgtggg ttacagttcg gaaaggacct tcatatcccg 1620 atctttccgt cgccgccatc tctgctatgt ttggcgatgg taattcaccg ggtttggttt 1680 atcagtatgc tgcgtccgga gttaaggcca ccaataagtt actttatgac ctgtccgaga 1740 tgcgtgctga tatcggcgac atgcgtaagt acgccgtcct ggtttactcg aaagacgata 1800 aactagagaa ggacgagatt gtacttcatg tcgacgtcga gcatcaacga attcctatct 1860 cacggatgct cccgacttag tccgtgtgtt taccggcgtc cgaagacgtt aaactacact 1920 ctcaatcgcg agtgctgagt tggtagtatt gctccaaact gcctgaagtc cctaaacgtg 1980 ttgttgcgcg gggaacgggt tgtccatcca gcttacggct aaaatggtca gtcgtgtctt 2040 tcacacgccg atgtcttaca agatgtcgag gtacccttgc gggtatcgcc tgtggttttc 2100 cacaggttct cgtccgaaga cgttaaacta cactctcttt attgcgagtg ctgagttggt 2160 agttttgctt taaactatct gaagtcgcta aatccattac tggttgcgaa cgggttgtcc 2220 atccagctta cggctaaaat ggtcagtcat gccccaaagg catgccgaca ccctacaggg 2280 ttgtcgaggt acccttgaaa tcatctccta gatttcttcg gaagggcttc gtgagaagct 2340 cgtgcacggt aatacactga tattaccaag agtgcgggta tcgcctgtgg ttttccacag 2400 gttctccata aggagacca 2419 //