ID   AJ297611; SV 1; linear; genomic RNA; STD; VRL; 1678 BP.
XX
AC   AJ297611;
XX
DT   22-AUG-2000 (Rel. 64, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Tomato spotted wilt virus N gene for nucleocapsid protein, genomic RNA,
DE   isolate LE98/527
XX
KW   N gene; nucleocapsid protein.
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1678
RA   Adam G.;
RT   ;
RL   Submitted (18-AUG-2000) to the INSDC.
RL   Adam G., Pflanzenschutz, Institut fuer Angew. Botanik, Marseillerstr. 7,
RL   20355 Hamburg, GERMANY.
XX
RN   [3]
RX   PUBMED; 11346302.
RA   Heinze C., Letschert B., Hristova D., Yankulova M., Willingmann P.,
RA   Atanassov A., Adam G.;
RT   "Variability of the N-protein and the intergenic region of the S RNA of
RT   tomato spotted wilt tospovirus (TSWV)";
RL   New Microbiol. 24(2):175-187(2001).
XX
DR   MD5; 7b25290facba2eaf7da4d7facd0b1dd3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1678
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /strain="TSWV"
FT                   /isolate="LE 98/527"
FT                   /mol_type="genomic RNA"
FT                   /country="Germany"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(751..1527)
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q88910"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q88910"
FT                   /protein_id="CAC04252.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 1678 BP; 529 A; 291 C; 255 G; 603 T; 0 other;
     atgtcttcca tctaacacac aaactatgtc ttacttggac agcatccaaa tcccttcctg        60
     gaagatagac tttgccaggg gagaaattaa gatttctcca caacctgttt cagttgcaaa       120
     atctttgtta aagcttgatt taagcgggat cgaaaagaaa gaatctaaga ttccggaaac       180
     atatgcttca ggatcaaaat aatcttgctg tgtccggttt ttctaattat gttatgttta       240
     ttttctttct ttacttataa ttatttctct gttttgtcat ttcttttaag ttcctcctgt       300
     ttaatagaaa ccataaaaca aaaaataaaa taaaaataaa aataaaatca aaaatgaaac       360
     aaaaatcaaa aaatgaaaca aaaataaaaa ataaaaaatg aaataaaaac aacaaaaaat       420
     taaaaaacaa aaacccaaaa aagatcccga aagggacaat cttggccaaa tttgggtttt       480
     gttttgtttt tgttttttgt tttttgtttt tatttttatt tttattttat ttatttattt       540
     tattttattt ttatttttta ttttgttttt tattttatgt ttttttgttg tttttgttat       600
     ttgtttattt attaagcata acacacagaa agcaaacttt aattaaacac acttatttta       660
     aatttaacac actaagcaag cacaagcaat aaagataaag aaagctttat atatttgtag       720
     acttttccat aatttaactt acaactgatt ttaagcaagt tctgcgagtt ttgcctgttt       780
     tttaaccccg aacatttcat agaacttgtt aagagtttca ctgtaatgtt ccatagcaat       840
     acttccttta gcattaggat tgctggagct gagtatagca gcatactctt tccctttctt       900
     cacctgatct tcattcattt cgaatgcttt gcttttcagc acagtgcaaa cttttcctaa       960
     ggcttctctg gtgtcatact tctttgggtc aatcccgagg tctttgtatt ttgcatcctg      1020
     atatatagcc aagacaacac tgatcatctc aaagctatca actgaagcaa taagaggtaa      1080
     gctacctccc agcattatgg caagcctcac agactttgca tcatcaagag gtaatccata      1140
     ggcttgaatc aaagggtggg aagcaatctt agatttgata gtattgagat tctcagaatt      1200
     cccagtttcc tctacaagcc tgaccctgat caagctatca agccttctga aggtcatgtc      1260
     agtggctcca atcctgtctg aagttttctt tatggtaatt ttaccaaaag taaaatcact      1320
     ttgtttaata accttcatta tactctgacg attcttcagg aatgtcagac atgaaataac      1380
     gctcatcttc ttgatctggt cgaggttttc cagacaaaaa gtcttgaagt tgaatgctac      1440
     cagattctga tcttcctcaa actcaaggtc tttgccttgt gtcaacaaag caacaatgct      1500
     ttccttagtg agcttaacct tagacatgat gattgtagaa gttgttatat gctttgaccg      1560
     tatgtaattc aaggtgcgaa agtgcaactc tgtattccgc agtcgtttct tagggtttta      1620
     atgtgatgat ttgtaagact gagtgttaag gtttgaataa aattgacacg attgctct        1678
//