ID   AJ297609; SV 1; linear; genomic RNA; STD; VRL; 1535 BP.
XX
AC   AJ297609;
XX
DT   22-AUG-2000 (Rel. 64, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Tomato spotted wilt virus N gene for nucleocapsid protein, genomic RNA,
DE   isolate GD98
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KW   N gene; nucleocapsid protein.
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OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1535
RA   Adam G.;
RT   ;
RL   Submitted (18-AUG-2000) to the INSDC.
RL   Adam G., Pflanzenschutz, Institut fuer Angew. Botanik, Marseillerstr. 7,
RL   20355 Hamburg, GERMANY.
XX
RN   [3]
RX   PUBMED; 11346302.
RA   Heinze C., Letschert B., Hristova D., Yankulova M., Willingmann P.,
RA   Atanassov A., Adam G.;
RT   "Variability of the N-protein and the intergenic region of the S RNA of
RT   tomato spotted wilt tospovirus (TSWV)";
RL   New Microbiol. 24(2):175-187(2001).
XX
DR   MD5; 0748785aef19aebae20903b6b21097bd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1535
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /strain="TSWV"
FT                   /isolate="GD98"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(608..1384)
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q9EAA7"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9EAA7"
FT                   /protein_id="CAC04253.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSVISCLTFLKNRQSIIKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 1535 BP; 489 A; 262 C; 225 G; 559 T; 0 other;
     atgcttcagg atcaaaataa tcttgctgtg tccggttttt ctaattatgt tatgtttatt        60
     ttctttcttt acttataatt acttctctgt tttgtcattt cttttaagtt cctcttgttt       120
     aatagaaaca ataaaacaaa aaataaaata aaaataaaaa tcaaaaatga aacaaaaatc       180
     aaaaaaatga aacaaaaata aaaaatgaaa taaaaacaac aaaaaaatta aaaaacaaaa       240
     acctaaaaaa gatcccgaaa gggacaattt tggccaaatt tgggttttgt tttgtttttg       300
     tttttgtttt ttgtttttat ttttatttta tttatttatt ttatttattt tttatttttt       360
     attcgcagtt tttattttat gttttttgat gtttttgtta ttttgtttgt ttattaagca       420
     caacacacag aaagcaaact ttaattaaac acacttattt taaatttatt aagcacaaca       480
     cacagaaagc aaactttaat taaacacact tattttaaat ttaacacact aagcaagcac       540
     aagcaataaa gataaagaaa gctttatata tttgtagact tttccataat ttaacttaca       600
     actgctttta agcaagttct gcgagttttg cctgtttttt aaccccaaac atttcataga       660
     acttgttaag agtttcactg taatgttcca tagcaatact tcctttagca ttaggattgc       720
     tggagctgag tatagcagca tactcttttc ctttcttcac ctgatcttca ttcatttcaa       780
     atgctttgct tttcagcaca gtgcaaactt ttcctaaggc ttccttggtg tcatacttct       840
     ttgggtcaat cccgaggtct ttgtattttg catcctgata tatagccaag acaacactga       900
     tcatctcaaa gctatcaact gaagcaataa gaggtaagct acctcccagc attatggcaa       960
     gcctcacaga ctttgcatca tcaagaggta acccataggc ttgaatcaaa gggtgggaag      1020
     caatcttaga tttgatagta ttgagattct cagaattccc agtttcctct acaagcctga      1080
     ccctgatcaa gctatcaagc cttctgaagg tcatgtcagt ggctccaatc ctgtctgaag      1140
     ttttctttat ggtaatttta ccaaaagtaa aatcactttg tttaataacc tttattatac      1200
     tctgacgatt cttcaggaat gtcagacatg aaataacgct catcttcttg atctggtcaa      1260
     ggttttctag acaaaaagtc ttgaagttga atgctaccag attctgatct tcctcgaact      1320
     caaggtcttt gccttgtgtc aacaaagcaa caatgctttc cttagtgagc ttaaccttag      1380
     acatgatgat tatagaagtt gttatatgct ttgaccgtat gtaattcaag gtgcgaaagt      1440
     gcaactctgt attccgcagt cgtttcttag ggttttaatg tgatgatttg taagactgag      1500
     tgttaaggtt tgaataaaat tgacacgatt gctct                                 1535
//