ID   AJ297608; SV 1; linear; genomic RNA; STD; VRL; 1476 BP.
XX
AC   AJ297608;
XX
DT   22-AUG-2000 (Rel. 64, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Tomato spotted wilt virus N gene for nucleocapsid protein, genomic RNA,
DE   isolate DH37
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KW   N gene; nucleocapsid protein.
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OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1476
RA   Adam G.;
RT   ;
RL   Submitted (18-AUG-2000) to the INSDC.
RL   Adam G., Pflanzenschutz, Institut fuer Angew. Botanik, Marseillerstr. 7,
RL   20355 Hamburg, GERMANY.
XX
RN   [3]
RX   PUBMED; 11346302.
RA   Heinze C., Letschert B., Hristova D., Yankulova M., Willingmann P.,
RA   Atanassov A., Adam G.;
RT   "Variability of the N-protein and the intergenic region of the S RNA of
RT   tomato spotted wilt tospovirus (TSWV)";
RL   New Microbiol. 24(2):175-187(2001).
XX
DR   MD5; d8b0b17d21270fa9a9e41cf264d1d8e3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1476
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /strain="TSWV"
FT                   /isolate="DH37"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(717..1325)
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q9EAA8"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9EAA8"
FT                   /protein_id="CAC04250.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLEDLDQI
FT                   KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTSRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKSLHCAEKQSI"
XX
SQ   Sequence 1476 BP; 453 A; 254 C; 226 G; 543 T; 0 other;
     atgcttcagg atcaaaataa tcttgctgtg tccggttttt ctaattatgt tatgtttatc        60
     ttctttcttt acttataatt atttctctgt tttgtcattt cttttaagtt cctcttgttt       120
     aatagaaacc ataaaacaaa aaataaaata aaaataaaaa tcaaaaaatg aaacaaaaat       180
     caaaatgaaa caaaaataaa aaatgaaata aaaacaacaa aaaaattaaa aaacaaaaac       240
     ccaaaaaaga tcccgaaagg gacaattttg gccaaatttg gggtttgttt tgtttttgtt       300
     tttgtttttt gtttttattt ttattttatt tattttattt tttatttttt attttttatt       360
     tttgttttta ttttatgttt tttgttgttt ttgttatttt gtttgtttat aagcacaaca       420
     cacagaaagc aaactttaat taaacacact tattttaaat ttaacacact aagcaagcac       480
     aagcaataaa gataaagaaa gctttatata tttgtagact tttccatagt ttaacttaca       540
     actgctttta agcaagttct gcgagttttg cctgtttttt aaccccaaac atttcataga       600
     acttgttaag agtttcactg taatgttcca tagcaatact tcctttagca ttaggattgc       660
     tggagctgag tatagcagca tactcttttc ctttcttcac ctgatcttca ttcatttcaa       720
     atgctttgct tttcagcaca gtgcaaactt tttcctaagg cttccctggt gtcatacttc       780
     tttgggtcaa tcccgaggtc tttgtatttt gcatcctgat atatagccaa gacaacactg       840
     atcatctcaa agctatcaac tgaagcaata agaggtaagc tacctcccag cattatggca       900
     agtctcacag actttgcatc atcaagaggt aatccatagg cttggatcaa agggtgggaa       960
     gcaatcttag atttgatagt attgagattc tcagaattcc cagtttcctc tacaagcctg      1020
     accctgatca agctatcaag ccttctggag gtcatgtcag tggctccaat cctgtctgaa      1080
     gttttcttta tggtaatttt accaaaagta aaatcacttt gtttaataac cttcattata      1140
     ctctgacgat tcttcaggaa tgtcagacat gaaataacgc tcatcttctt gatctggtcg      1200
     aggtcttcca aacaaaaagt cttgaagttg aatgctacca gattctgatc ttcctcaaac      1260
     tcaaggtctt tgccttgtgt caacaaagca acaatgcttt ccttagtgag cttaacctta      1320
     gacatgatga ttgtagaagt tgttatatgc tttgaccgta tgtaattcga ggtgcgaaag      1380
     tgcaactctg tattccgcag tcgtttctta gggttttaat gtgatgattt gtaagactga      1440
     gtgttaaggt ttgaataaaa ttgacacgat tgctct                                1476
//