ID   AJ296602; SV 1; linear; genomic RNA; STD; VRL; 1532 BP.
XX
AC   AJ296602;
XX
DT   01-AUG-2000 (Rel. 64, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   tomato spotted wilt virus n gene for nucleocapsid protein, isolate 20
DE   Da96/1, genomic RNA
XX
KW   N gene; nucleocapsid protein.
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1532
RA   Adam G.;
RT   ;
RL   Submitted (29-JUL-2000) to the INSDC.
RL   Adam G., Pflanzenschutz, Institut fuer Angew. Botanik, Marseillerstr. 7,
RL   20355 Hamburg, GERMANY.
XX
RN   [3]
RX   PUBMED; 11346302.
RA   Heinze C., Letschert B., Hristova D., Yankulova M., Willingmann P.,
RA   Atanassov A., Adam G.;
RT   "Variability of the N-protein and the intergenic region of the S RNA of
RT   tomato spotted wilt tospovirus (TSWV)";
RL   New Microbiol. 24(2):175-187(2001).
XX
DR   MD5; 92c3cbddba0efdf1c64ef8037c515c65.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1532
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /chromosome="S-RNA"
FT                   /isolate="20 Da96 /1"
FT                   /mol_type="genomic RNA"
FT                   /country="Bulgaria"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(605..1381)
FT                   /gene="n"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q9ICP2"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ICP2"
FT                   /protein_id="CAC01286.1"
FT                   /translation="MFKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGSSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKCDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA"
XX
SQ   Sequence 1532 BP; 484 A; 261 C; 225 G; 562 T; 0 other;
     tatgcttcag gatcaaaata atcttgctgt gtccggtttt tctaactatg ttatgtttat        60
     tttctttctt tacttataat tacttctctg ttttgtcatt tcttttaagt tcctcttgtt       120
     taatagaaac cataaaacaa aaaataaaat aaaaataaaa atcaaaaatg aaacaaaaat       180
     caaaaaatga aacaaaaata aaaaatgaaa taaaacaaca aaaaaataaa aaacaaaaaa       240
     ccaaaaaaga tcccgaaagg gacaattttg gccaaatttg ggttttgttt tgtttttgtt       300
     tttgtttttt gtttttattt ttattttatt tatttatttt atttattttt tattttttat       360
     ttttgttttt attttatgtt ttttgttgtt tttgttattt tgtttgttta ttaagcacaa       420
     cacacagaaa gcaaacttta attaaacaca cttattttaa atttattaag cacaacacac       480
     agaaagcaaa ctttaattaa acacacttat tttaaattta acacactaag caagcacaag       540
     caataaagat aaagaaagct ttatatattt gtagactttt ccataattta acttacaact       600
     gcttttaagc aagctctgtg agttttgcct gttttttaac cccaaacatt tcatagaact       660
     tgttaagagt ttcactgtaa tgttccatag caatacttcc tttagcatta ggattgctgg       720
     agctgagtat agcagcatac tcttttcctt tcttcacctg atcttcattc atttcaaatg       780
     ctttgctttt cagcacagtg cagacttttc ctaaggcttc cttggtgtca cacttctttg       840
     ggtcaattcc gaggtctttg tattttgcat cctgatatat agccaagaca acactgatca       900
     tctcaaagct atcaactgaa gcaataagag gtaagctact tcccagcatt atggcaagcc       960
     tcacagactt tgcatcatca agaggtaatc cataggcttg aatcaaaggg tgggaagcaa      1020
     tcttagattt gatagtattg agattctcag aattcccagt ttcctctaca agcctgaccc      1080
     tgatcaagct atcaagcctt ctgaaggtca tgtcagtggc tccaatcctg tctgaagttt      1140
     tctttatggt aattttacca aaagtaaaat cactttgttt aataaccttc attatactct      1200
     gacgattctt caggaatgtc agacatgaaa taacgctcat cttcttgatc tggtcgaggt      1260
     tttctagaca aaaagtcttg aagttgaatg ctaccagatt ctgatcttcc tcaaactcaa      1320
     ggtctttgcc ttgtgtcaac aaagcaacaa tgctttcctt agtgagctta accttaaaca      1380
     tgatgattgt agaagttgtt atatgctttg accgtatgta attcaaggtg cgaaagtgca      1440
     actctgtatt ccgcagtcgt ttcttagggt tttaatgtga tgatttgtaa gactgagtgt      1500
     taaggtttga ataaaattga cacgattgct ct                                    1532
//