ID   AJ296600; SV 1; linear; genomic RNA; STD; VRL; 1500 BP.
XX
AC   AJ296600;
XX
DT   01-AUG-2000 (Rel. 64, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
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DE   tomato spotted wilt virus n gene for nucleocapsid protein, isolate 98/0472,
DE   genomic RNA
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KW   N gene; nucleocapsid protein.
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OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1500
RA   Adam G.;
RT   ;
RL   Submitted (29-JUL-2000) to the INSDC.
RL   Adam G., Pflanzenschutz, Institut fuer Angew. Botanik, Marseillerstr. 7,
RL   20355 Hamburg, GERMANY.
XX
RN   [3]
RX   PUBMED; 11346302.
RA   Heinze C., Letschert B., Hristova D., Yankulova M., Willingmann P.,
RA   Atanassov A., Adam G.;
RT   "Variability of the N-protein and the intergenic region of the S RNA of
RT   tomato spotted wilt tospovirus (TSWV)";
RL   New Microbiol. 24(2):175-187(2001).
XX
DR   MD5; 9561a541fa171093c8dcc67b28d6ee71.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1500
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /chromosome="S-RNA"
FT                   /isolate="98/0472"
FT                   /mol_type="genomic RNA"
FT                   /country="South Africa"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(573..1349)
FT                   /gene="n"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q9ICP4"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ICP4"
FT                   /protein_id="CAC01284.1"
FT                   /translation="MSKVKLTKENIVALLTQGKDLEFEEDQNLVAFNFKTFCQENLDQI
FT                   KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSMIRVRL
FT                   VEETGNSENLNIIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTGLA"
XX
SQ   Sequence 1500 BP; 472 A; 257 C; 211 G; 560 T; 0 other;
     attatgcttc aggagcaaaa taatcttgct gtgtccagct tttctaatta ttttatgttt        60
     attttctttc tttacttata attatttctc tgttttgtaa tttcttttaa gttcctcctg       120
     tttaatagaa accataaaac aaaaaaataa ataaaataaa aatcaaaaaa taaaacaaaa       180
     atcaaaaaat gaaacaaaaa tcaaaaaatg aaataaaaac aacaaaaaaa ctaaaaaaca       240
     aaaaaccaaa aaagatcccg aaagggacaa ttttggccaa atttggggtt tgttttgttt       300
     ttgttttttg ttctttgttt tttgtttttt gttttttatt tttattttta tttttatttt       360
     atttatttat tttattttat tttttatttt ttatttttta ttttttattt ttattcttta       420
     ttttgtttat ttattaagca caacacacag aaagcaaact ttaattaaac acacttattt       480
     taaattaaac acactaagca agcacaagca ataaagataa agaaagcttt atatatttgt       540
     agacttttcc ataatttaac ttacaactgc ttttaagcaa gtcctgtgag ttttgcctgt       600
     tttttaaccc cgaacatttc atagaacttg ttaagagttt cactgtaatg ttccatagca       660
     atacttcctt tagcattagg attgctagag ctaagtatag cagcatactc ttttcctttc       720
     ttcacctgat cttcattcat ttcaaatgct ttgcttttca gcacagtgca aacttttcct       780
     aaggcttcct tggtgtcata cttctttggg tcaatcccga ggtctttgta ttttgcatcc       840
     tgatatatag ctaagacaac actaatcatc tcaaagctat caactgaagc aataagaggt       900
     aaactacctc ccagcattat ggcaagcctc acagactttg catcatcaag aggtaatcca       960
     taagcctgaa tcaaagggtg ggaagcaatc ttagatttga taatattgag attctcagaa      1020
     ttcccagttt cctctacaag cctgaccctg atcatgctat caagccttct gaaggtcatg      1080
     tcagtggctc caatcctgtc tgaagttttc tttatggtaa ttttaccaaa agtaaaatca      1140
     ctttgtttaa taaccttcat tatactctga cgattcttca ggaatgtcag acatgaaata      1200
     acgctcatct tcttgatctg gtcgaggttt tcctgacaaa aagtcttgaa gttgaatgct      1260
     accagattct gatcttcctc aaactcaaga tctttgcctt gcgtcaacaa agcaacaatg      1320
     ttttccttag tgagcttaac cttagacatg atgattgtag aagttgttat atgctttgac      1380
     cgtatgtaat tcaaggtgcg aaagtgcaac tctgtattcc gcagtcgttt cttagggttt      1440
     taatgtgatg atttgtaaga ctgagtgcta aggtttgaat aaaattgaca cgattgctct      1500
//