ID   AJ296599; SV 1; linear; genomic RNA; STD; VRL; 1486 BP.
XX
AC   AJ296599;
XX
DT   01-AUG-2000 (Rel. 64, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
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DE   tomato spotted wilt virus n gene for nucleocapsid protein, isolate C27084,
DE   genomic RNA
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KW   N gene; nucleocapsid protein.
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OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-1486
RA   Adam G.;
RT   ;
RL   Submitted (29-JUL-2000) to the INSDC.
RL   Adam G., Pflanzenschutz, Institut fuer Angew. Botanik, Marseillerstr. 7,
RL   20355 Hamburg, GERMANY.
XX
RN   [3]
RX   PUBMED; 11346302.
RA   Heinze C., Letschert B., Hristova D., Yankulova M., Willingmann P.,
RA   Atanassov A., Adam G.;
RT   "Variability of the N-protein and the intergenic region of the S RNA of
RT   tomato spotted wilt tospovirus (TSWV)";
RL   New Microbiol. 24(2):175-187(2001).
XX
DR   MD5; 619af16fc261528b463bb2c532f5417a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1486
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /chromosome="S-RNA"
FT                   /isolate="C27084"
FT                   /mol_type="genomic RNA"
FT                   /country="Czech Republic"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(624..1334)
FT                   /gene="n"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:Q9ICP5"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:Q9ICP5"
FT                   /protein_id="CAC01283.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAIGTLQ"
XX
SQ   Sequence 1486 BP; 463 A; 252 C; 223 G; 548 T; 0 other;
     tatgcttcag gatcaaaata atcttgctgt gtccggtttt tctaattatg ttatgtttat        60
     tttctttctt tacttataat tatttctctg tttgtcattt cttttaagtt cctcctgttt       120
     aatagaaacc ataaaacaaa aaataaaata aaaataaaat taaaaatgaa acaaaaatca       180
     aaaatgaaac aaaaataaaa aataaaaaat ggaataaaaa caacaaaaaa attaaaaaac       240
     aaaaacccaa aaaagatccc gaaagggaca atcttggcca aatttgggtt ttgttttgtt       300
     tttgtttttt gttttttgtt tttattttta ttttatttat ttattttatt ttatttttat       360
     tttttatttt gttttttatt ttatgttttt tgttgttttt gttattttgt ttatttatta       420
     agcataacac acagaaagca aactttaatt aaacacactt attttaaatt taacacacta       480
     agcaagcaca agcaataaag ataaagaaag ctttatatat ttgtagactt ttccataatt       540
     taacttacaa ctgattttaa gcaagttctg cgagttttgc ctgtttttta accccgaaca       600
     tttcatagaa cttgttaaga gtttcactgt aatgttccaa tagcaatact tcctttagca       660
     ttaggattgc tggagctgag tatagcagca tactcttttc ctttcttcac ctgatcttca       720
     ttcatttcaa atgctttgct tttcagcaca gtgcaaactt ttcctaaggc ttctctggtg       780
     tcatacttct ttgggtcaat cccgaggtct ttgtattttg catcctgata tatagccaag       840
     acaacactga tcatctcaaa gctatcaact gaagcaataa gaggtaagct acctcccagc       900
     attatggcaa gcctcacaga ctttgcatca tcaagaggta atccataggc ttgaatcaaa       960
     gggtgggaag caatcttaga tttgatagta ttgagattct cagaattccc agtttcctct      1020
     acaagcctga ccctgatcaa gctatcaagc cttctgaagg tcatgtcagt ggctccaatc      1080
     ctgtctgaag ttttctttat ggtaatttta ccaaaagtaa aatcactttg tttaataacc      1140
     ttcattatac tctgacgatt cttcaggaat gtcagacatg aaataacgct catcttcttg      1200
     atctggtcga ggttttccag acaaaaagtc ttgaagttga atgctaccag attctgatct      1260
     tcctcaaact caaggtcttt gccttgtgtc aacaaagcaa caatgctttc cttagtgagc      1320
     ttaaccttag acatgatgat tgtagaagtt gttatatgct ttgaccgtat gtaattcaag      1380
     gtgcgaaagt gcaactctgt attccgcagt cgtttcttag ggttttaatg tgatgatttg      1440
     taagactgag tgttaaggtt tgaataaaat tgacacgatt gctctc                     1486
//