ID AJ293571; SV 1; linear; genomic RNA; STD; VRL; 2746 BP. XX AC AJ293571; XX DT 15-JUL-2000 (Rel. 64, Created) DT 18-JUL-2001 (Rel. 68, Last updated, Version 3) XX DE Kalanchoe latent virus gene for RNA replicase (partial), ORF2, ORF3, ORF4, DE gene for coat protein and ORF6 (partial), genomic RNA, isolate PV-0290 XX KW ORF1; ORF2; ORF3; ORF4; ORF5; ORF6; RNA replicase. XX OS Kalanchoe latent virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-2746 RA Nicolaisen M.; RT ; RL Submitted (13-JUL-2000) to the INSDC. RL Nicolaisen M., Plant Protection, Danish Institute of Agricultural Sciences, RL Forsoegsvej 1, Slagelse, 4200, DENMARK. XX RN [3] RX DOI; 10.1023/A:1011101904002. RX PUBMED; 11450944. RA Nicolaisen M., Nielsen S.L.; RT "Analysis of the triple gene block and coat protein sequences of two RT strains of Kalanchoe latent carlavirus"; RL Virus Genes 22(3):265-270(2001). XX DR MD5; 02b454c2e12f72b7f986af34195d3e7d. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Kalanchoe latent virus" FT /isolate="PV-0290" FT /mol_type="genomic RNA" FT /note="carlavirus" FT /db_xref="taxon:132477" FT CDS <1..378 FT /codon_start=1 FT /transl_table=1 FT /product="RNA replicase" FT /note="ORF1" FT /db_xref="GOA:Q9ICW7" FT /db_xref="InterPro:IPR001788" FT /db_xref="UniProtKB/TrEMBL:Q9ICW7" FT /protein_id="CAB97502.1" FT /translation="MCSNTRLHVSSKHEGFLKKLKLKAKVAHTVNPTFCGWNLCSDGIF FT KKPQLVFERLCIAKETNNLVNCIDNYAIEVAYAYQMGEKAVARMNEEEVDAFYNCVRVI FT IKNKHLLKSDVRLIYESGKIQ" FT CDS 405..1091 FT /transl_table=1 FT /product="hypothetical protein, 25K" FT /note="ORF2" FT /db_xref="GOA:Q9ICW6" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q9ICW6" FT /protein_id="CAB97503.1" FT /translation="MDVLVNYLSKYKFVRLSSCITPPIVVHSVPGAGKSSLIRDLINSD FT CRFSAFTFGKEDSQSITGVRISKATKELEAREFCIFDEYLEGDLPPWAFAAFADPLQGG FT SGKVLRAHFIKEESHRFGKCTAQLLRELKFSVTASGEDVVQIRGLYEVDPQDTIIYYER FT EVGELLRAHCVEAYSICEIRGQTFDSVTFVTANSKPIDRELSFQCLTRHRRSLLILSPD FT ASYTAC" FT CDS 1069..1389 FT /transl_table=1 FT /product="hypothetical protein, 12K" FT /note="ORF3" FT /db_xref="GOA:Q9ICW5" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q9ICW5" FT /protein_id="CAB97504.1" FT /translation="MPLTPPVNYSQVYVAAVIGAAVAITLGLISRSTLPNVGDLQHNLP FT HGGRYRDGTKVVEYFKPGKLNSFESRNSFKSQPWLLVVLLIALIIGLSRRTNACPTCGR FT QH" FT CDS 1371..1565 FT /transl_table=1 FT /product="hypothetical protein, 7K" FT /note="ORF4" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q9ICW4" FT /protein_id="CAB97505.1" FT /translation="MWSSALSILILLLSYWLTSWMMGSMSSAPCTIIITGESVRITGCH FT LSAEHIKALSHLKALQVRL" FT CDS 1607..2461 FT /transl_table=1 FT /product="coat protein" FT /note="ORF5" FT /db_xref="GOA:Q9ICW3" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/TrEMBL:Q9ICW3" FT /protein_id="CAB97506.1" FT /translation="MAPKPDPEVAGSTSQLGTNQAAVVGTVGPSREKMLEDRLTNLIET FT LNKDMHNSNLKNIAFEIGRPVLEPTAQMKRNPANPYGRFSIDELFKMKIDVVSNNMATT FT EQMAKITADITGLGVPSEQVAEVILKMVIMCASVSSSAFLDPDGSVEFSSGAVPVDSIA FT AIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPSDWQAMGFPFNARFAAFDTFDYVTNAAA FT IQPVEGIIRRPTSEEVIAHNAHKRLALDRANRNDRLGNLETEYTGGIQGAEITRNHRNA FT NNG" FT CDS 2445..>2746 FT /transl_table=1 FT /product="hypothetical protein, 11K" FT /note="ORF6" FT /db_xref="GOA:Q9ICW2" FT /db_xref="InterPro:IPR002568" FT /db_xref="UniProtKB/TrEMBL:Q9ICW2" FT /protein_id="CAB97507.2" FT /translation="MQTMGETKSWKKAVIFSLYNKLPLCLCVHIMRRASSRCVGTGRST FT YARRRRAISIGRCERCYRCYPPICNSKCDNKTCFPGISSNEKIVNFIRYGVTEVIP" XX SQ Sequence 2746 BP; 745 A; 596 C; 685 G; 719 T; 1 other; atgtgctcaa acacgagact gcatgtgagc tcgaaacatg aaggtttcct caagaagttg 60 aagctcaaag caaaggttgc tcatacagtg aatcccactt tttgtgggtg gaacctttgc 120 tcggacggta tctttaaaaa accacaactt gtctttgaga gactttgcat agcgaaggag 180 accaacaatc tggtaaattg cattgataat tacgctatag aagtggcgta tgcttaccaa 240 atgggagaga aggcggttgc gcgcatgaac gaagaagagg ttgacgcatt ctataactgc 300 gtcagagtca tcattaagaa taagcatttg cttaaatctg atgtccgcct tatttatgaa 360 tcgggaaaaa ttcagtagct taggtgtttg cttayagatt gtatatggat gtgcttgtga 420 attatttgag taagtataag ttcgtacgtt tgtctagctg cataactcct ccgattgttg 480 ttcacagtgt tccaggcgcc ggtaagagta gcttaattag ggatttgatc aatagcgatt 540 gcaggttttc cgccttcact ttcggtaaag aggacagcca atctattact ggtgtgcgta 600 ttagtaaagc tacaaaagag ttagaggcta gagagttctg tattttcgac gagtacttgg 660 aaggggacct acctccttgg gcttttgccg cgtttgcaga ccctttgcag ggcgggagcg 720 gcaaagtttt aagggcgcat ttcatcaagg aagaatcgca tcgtttcggc aagtgcacag 780 cgcaactcct ccgcgaactc aaattttcag tcactgcaag tggtgaggat gtcgtgcaaa 840 tacgagggtt gtatgaggtt gatccccagg acacgataat ctattacgaa cgcgaggtag 900 gggaattact tagagcgcac tgcgttgaag cctacagtat ctgtgaaatt cgagggcaga 960 ctttcgatag tgtgactttc gttacagcta attcaaaacc catcgatcgt gagctcagct 1020 tccagtgcct tactaggcac agacgttctt tgctgatcct tagtcctgat gcctcttaca 1080 ccgcctgtta attactcaca agtatacgtt gcggcggtta taggtgcggc tgtcgccatt 1140 actcttggac tcatttctag aagtacgctg ccgaacgtcg gggatttaca gcataactta 1200 ccacacggcg gtagatatcg tgacgggact aaggtcgttg aatatttcaa accagggaag 1260 ttaaactctt tcgagtcacg caactcattc aaatcacaac cctggttgct cgttgtattg 1320 ctcattgcgc ttatcattgg acttagtaga aggacaaatg cctgcccaac atgtggtcgt 1380 cagcactaag catcttgatt ttattgctaa gttactggtt gacctcatgg atgatgggaa 1440 gtatgtcgtc ggctccctgc acgataatca ttacggggga gtcagtgaga attacgggct 1500 gtcatttgag cgcagaacat ataaaagctt tgagtcacct gaaggcgcta caagtgcgcc 1560 tttaggtttg caggcaggta atcgttatac tttacacctt gacattatgg caccaaaacc 1620 tgacccagag gtcgcgggtt ctacatcaca gcttggcaca aatcaggcgg cagtcgttgg 1680 aactgtcgga ccttcccgtg agaaaatgct cgaggatagg ctgaccaacc tcatagaaac 1740 gctcaacaaa gacatgcaca actccaactt gaagaatatc gcattcgaga ttgggaggcc 1800 agtcctagaa ccgactgcac agatgaagag gaaccctgca aacccatacg ggaggttctc 1860 gatcgacgag ctttttaaga tgaagatcga tgtcgtctcc aataacatgg ctaccactga 1920 acaaatggct aagatcacag cggacattac tgggctaggt gtgccatcag aacaggtcgc 1980 agaggttatc ctgaaaatgg ttatcatgtg cgctagtgtg agtagctcag catttttaga 2040 tccagacggt agtgttgagt tcagctcagg ggctgtgcct gtcgattcaa tcgcggcaat 2100 tatgaagaag catgcgggcc ttagaaaagt atgccggcta tatgcgccaa tcgtctggaa 2160 cagtatgctc gtccgtaatc aaccaccatc agactggcag gcgatgggat ttccatttaa 2220 cgcgcgcttc gcagcattcg acacatttga ctacgtcacg aacgcggcgg caatacagcc 2280 agtggagggc atcattcgaa gacccacctc tgaagaggtc attgctcaca acgcacacaa 2340 acgcttggct ctcgatcgag cgaaccgaaa tgaccgactt gggaatctgg agaccgaata 2400 cactggtggc attcaaggtg cggagataac tcgaaaccat cgaaatgcaa acaatgggtg 2460 agactaaatc ctggaagaaa gcagttatat ttagcttgta taataaatta cctttatgtt 2520 tgtgtgtgca tattatgcgg agggcctcta gccgatgtgt tggaaccgga cgttctactt 2580 atgcgagacg tcgcagggcc atttccatag gcaggtgtga gaggtgttac cgctgctatc 2640 cccctatctg caattctaag tgtgataata aaacctgctt tcccgggatt tcttctaatg 2700 aaaaaattgt caatttcatc aggtacggag taaccgaggt gatacc 2746 //