Dbfetch
ID AJ293570; SV 1; linear; genomic RNA; STD; VRL; 2761 BP. XX AC AJ293570; XX DT 15-JUL-2000 (Rel. 64, Created) DT 18-JUL-2001 (Rel. 68, Last updated, Version 3) XX DE Kalanchoe latent virus gene for RNA replicase (partial), ORF2, ORF3, ORF4, DE gene for coat protein and ORF6 (partial), genomic RNA, isolate 1452 XX KW ORF1; ORF2; ORF3; ORF4; ORF5; ORF6; RNA replicase. XX OS Kalanchoe latent virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus. XX RN [1] RP 1-2761 RA Nicolaisen M.; RT ; RL Submitted (13-JUL-2000) to the INSDC. RL Nicolaisen M., Plant Protection, Danish Institute of Agricultural Sciences, RL Forsoegsvej 1, Slagelse, 4200, DENMARK. XX RN [2] RX DOI; 10.1023/A:1011101904002. RX PUBMED; 11450944. RA Nicolaisen M., Nielsen S.L.; RT "Analysis of the triple gene block and coat protein sequences of two RT strains of Kalanchoe latent carlavirus"; RL Virus Genes 22(3):265-270(2001). XX DR MD5; 5caeabfb7f2d4c246e864674d95193e8. DR EuropePMC; PMC3689765; 23805334. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Kalanchoe latent virus" FT /isolate="1452" FT /mol_type="genomic RNA" FT /note="carlavirus" FT /db_xref="taxon:132477" FT CDS <1..393 FT /codon_start=1 FT /transl_table=1 FT /product="RNA replicase" FT /note="ORF1" FT /db_xref="GOA:Q9ICX3" FT /db_xref="InterPro:IPR001788" FT /db_xref="UniProtKB/TrEMBL:Q9ICX3" FT /protein_id="CAB97496.1" FT /translation="FAGDDMCSNTRLHVSSKHEGFLKKLKLKAKVAHTANPTFCGWNLC FT PDGIFKKPQLVFERLCIAKETNNLVNCIDNYAIEVAYAYQMGEKAIARMNEEEVDAFYN FT CVRVIIKNKHLLKSDIRLIYESGKIQ" FT CDS 420..1106 FT /transl_table=1 FT /product="hypothetical protein, 25K" FT /note="ORF2" FT /db_xref="GOA:Q9ICX2" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q9ICX2" FT /protein_id="CAB97497.1" FT /translation="MDVFVSYLNKYKFVRLTSCITPPIIVHSVPGAGKSSLIRELINSD FT KRFSAFTFGKEDCQTITGVRINKATENLESREFCIFDEYLEGDLPAWAFAAFADPLQGG FT SGEVQRAHFIKEESHRFGKCTAQLLRELNFSITASGEDIVQIRGLYEVDPQDTIIFYER FT EVGELLRAHCVEAFCIRDIRGQTFDSVTFVTANSKPIDRELSFQCLTRHRRSLLILSPD FT ASYTGC" FT CDS 1084..1404 FT /transl_table=1 FT /product="hypothetical protein, 12K" FT /note="ORF3" FT /db_xref="GOA:Q9ICX1" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q9ICX1" FT /protein_id="CAB97498.1" FT /translation="MPLTPAVNYSQVYISAVIGSAVAITLGLISRNTLPFVGDLQHSLP FT HGGRYRDGTKVIDYFKPGKLNSFESRNSFKSQPWLLVILLIALIIGLSRRTNACPTCGR FT QH" FT CDS 1386..1580 FT /transl_table=1 FT /product="hypothetical protein, 7K" FT /note="ORF4" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q9ICX0" FT /protein_id="CAB97499.1" FT /translation="MWSSALIILISLLSFWSTSWIMESVSSAPCTIIITGESVRITGCF FT LSAEHIRALSHLKALQVRL" FT CDS 1622..2476 FT /transl_table=1 FT /product="coat protein" FT /note="ORF5" FT /db_xref="GOA:Q9ICW9" FT /db_xref="InterPro:IPR000052" FT /db_xref="InterPro:IPR013569" FT /db_xref="UniProtKB/TrEMBL:Q9ICW9" FT /protein_id="CAB97500.1" FT /translation="MAPKPEPENVASSSQPGGNQVANAGVAVPSREKVLEERLSKLIEM FT LNNDMHNSNLKNISFEIGRPALEPTAQMKRNPANPYGRFSIDELFKMKIDVVSNNMATT FT EQLAKIAADIAGVGVPSDLSRKVILKMVIMCASVSSSAFLDPDGSIEFSTGAVPVDSVA FT AIMKKHAGLRKVCRLYAPIVWNSMLVRNQPPSDWQAMGFPYNARFAAFDTFDYVTNTAA FT IQPVEGIIRRPTSEEVIAHNAHKRLALDRANRNDRLGNLETEYTGGIQGAEITRNHRNA FT NNG" FT CDS 2460..>2761 FT /transl_table=1 FT /product="hypothetical protein, 11K" FT /note="ORF6" FT /db_xref="GOA:Q9ICW8" FT /db_xref="InterPro:IPR002568" FT /db_xref="UniProtKB/TrEMBL:Q9ICW8" FT /protein_id="CAB97501.2" FT /translation="MQTMGESKSWKKAVIFSLYNKLPLCLCVHIMRRASNRCVGTGRST FT YARRRRAISIGRCERCFRCYPPICNSXCDNKTCFPGISSNEKVVNFIRYGVTEVIP" XX SQ Sequence 2761 BP; 745 A; 626 C; 676 G; 710 T; 4 other; tttgctggtg atgacatgtg ttccaacaca agactgcatg tgagctcaaa gcacgagggg 60 tttctcaaga agttaaagct caaagccaag gtagcgcaca cagcgaatcc tacgttttgc 120 ggatggaatc tgtgccctga tggcatattt aagaagccgc aattggtatt cgagcgtctt 180 tgcatcgcca aagagacaaa taacttggtc aactgcattg acaactatgc tatcgaggta 240 gcgtatgcat accagatggg tgagaaagct attgctcgga tgaacgagga agaggttgac 300 gctttctaca attgcgtcag agtcatcatc aagaacaagc acctgctcaa gtcggacatt 360 cgtctcatct acgagtcagg gaaaattcaa tagcttaggt gttcgcttct agattgtata 420 tggatgtgtt tgtgagttat ctgaataagt ataaatttgt acggttaact agttgcatta 480 cacctccgat tatcgttcac agtgttccgg gcgctggtaa gagtagttta attagggaat 540 taataaatag tgataagaga ttttctgcct tcaccttcgg taaggaagat tgtcagacga 600 tcactggtgt gcgaattaac aaggccactg aaaacttaga gtctcgagag ttctgcatct 660 ttgacgaata cttagaaggg gaccttccag cctgggcatt cgccgcattt gcggacccac 720 tgcaaggtgg aagtggtgaa gtccagcggg cacacttcat taaggaagaa tcgcatcgct 780 ttggcaagtg taccgcacag ctactccggg aacttaattt ctccattact gcgagtggtg 840 aagacatcgt gcaaatacgt gggctgtacg aagtggaccc tcaagacact ataatatttt 900 acgaacgcga ggtcggggaa cttttgcggg ctcactgcgt cgaggcgttc tgtatccgcg 960 atatcagagg tcaaactttc gatagtgtca cttttgttac agctaattcc aaaccaattg 1020 atagagagct cagcttccag tgcctcacaa ggcacagacg ttcattgctc atactaagcc 1080 ctgatgcctc ttacaccggc tgttaattac tcacaagtgt acatttcagc agttattggc 1140 tcagcagtag ccatcacact aggcctcatt tccagaaaca ccttgccgtt tgttggggat 1200 ttacagcata gtttgccgca cggcggtagr tatmgggayg ggaccaaagt tatcgattac 1260 ttcaagccag ggaaactaaa ctctttcgag tcgcgcaact cattcaagtc acagccctgg 1320 ttgcttgtta tcctactcat tgcgcttatc atcggactca gcagaaggac aaatgcatgc 1380 ccaacatgtg gtcgtcagca ctaatcatat tgatttcatt gctaagcttc tggtcgacct 1440 catggataat ggagagtgtg tcatcggctc cctgcacgat tatcatcacg ggggagtcgg 1500 tgagaattac gggatgcttt ttgagcgcag aacatataag agctttgagt cacctgaagg 1560 cgctacaagt gcgcctttag gtttgcaggc aggtaatcgt tatactttac accttgatat 1620 catggcacca aaaccagaac cagagaatgt ggcatcatca tctcaacccg gcggtaatca 1680 agtggcgaac gcaggcgtgg cagtaccttc ccgtgagaaa gtattagagg agagattgtc 1740 caagctcatt gaaatgctca ataatgacat gcacaactcc aacctcaaga acatctcctt 1800 cgagatcggg agaccagcac ttgagcctac cgcacagatg aagcggaacc ccgcaaatcc 1860 atacgggaga ttctcgatcg atgaactctt caagatgaaa attgatgtcg tctctaacaa 1920 catggcaacc actgaacagc tggccaaaat cgcagcggac atcgcagggg taggcgttcc 1980 atcggacttg tcgcggaagg tcattttgaa gatggtcatc atgtgcgcta gcgtcagcag 2040 ctctgcattt cttgatccag atggtagcat cgagttcagc acaggagctg tgcctgttga 2100 ctcggtcgca gcaatcatga agaaacatgc agggctaagg aaggtttgcc gattgtacgc 2160 gcctattgtc tggaatagca tgcttgttcg caatcaacca ccctcagact ggcaggccat 2220 gggttttcca tacaacgcgc gctttgctgc atttgataca ttcgactacg tcacaaatac 2280 tgcagctata cagccagttg agggcatcat tcggagaccc acttctgaag aagttattgc 2340 gcacaatgca cacaagcgct tggccctcga tcgggcgaat cgcaatgacc gccttgggaa 2400 tctggagacg gagtacacag gtggtattca aggtgctgag ataactcgaa accatcgaaa 2460 tgcaaacaat gggtgagtca aagtcctgga agaaagcagt gatatttagc ttgtataata 2520 aattaccttt atgtttgtgt gtgcatatta tgcggagagc ctctaaccgg tgtgttggca 2580 ctggacgttc tacttacgca agacgtcgca gagctatttc catcggtagg tgtgagaggt 2640 gtttccgctg ctatcctcct atttgcaatt ccragtgtga taataaaacc tgctttcccg 2700 ggatttcctc caatgaaaaa gttgtcaatt tcatcaggta cggagtaacc gaggtgatac 2760 c 2761 //