ID   AJ293277; SV 1; linear; genomic RNA; STD; VRL; 1684 BP.
XX
AC   AJ293277;
XX
DT   06-FEB-2001 (Rel. 66, Created)
DT   11-MAY-2001 (Rel. 67, Last updated, Version 4)
XX
DE   Soybean mosaic virus partial genomic RNA for viral polyprotein
XX
KW   coat protein; NIb replicase; viral polyprotein.
XX
OS   Soybean mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1684
RA   Adams M.J.;
RT   ;
RL   Submitted (07-SEP-2000) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [3]
RX   DOI; 10.1007/s007050170144.
RX   PUBMED; 11402861.
RA   Chen J., Chen J., Adams M.J.;
RT   "A universal PCR primer to detect members of the Potyviridae and its use to
RT   examine the taxonomic status of several members of the family";
RL   Arch. Virol. 146(4):757-766(2001).
XX
DR   MD5; 5ec3ebdcb2019300e73525e652c5412e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1684
FT                   /organism="Soybean mosaic virus"
FT                   /host="soybean"
FT                   /isolate="Hangzhou"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:12222"
FT   CDS             <1..1431
FT                   /codon_start=1
FT                   /db_xref="GOA:Q998S6"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q998S6"
FT                   /protein_id="CAC28537.1"
FT                   /translation="GNNSGQPSTVVDNTLMVVIAMYYSCCKQGWSDEDIQERLVFFANG
FT                   DDIILAVSDKDTWLYDTLSISFAELGLNYNFDERTKRREELWFMSHKAMLVDGIYIPKL
FT                   EPERIVSILEWDRSKELMHRTEAICAAMIEAWGYTELLQEIRKFYLWLLSKDEFKELAS
FT                   SGKAPYIAETALRKLYTDVNAQTSELQRYLEVLDFNHADDCCESVSLQSGKEKEGDMDA
FT                   GKDPKKNASSSKGAGASSKDVNVGSKGKVVPRLQKITRKMNLPMVEGKIILSLDHLLEY
FT                   KPNQVDLFNTRATRTQFEAWYNAVKDEYELDDEQMGVVMNGFMVWCIDNGTSPDANGVW
FT                   VMMDGEEQIEYPLKPIVENAKPTLRQIMHHFSDAAEAYIEMRNSESPYMPRYGLLRNLR
FT                   DRELARYAFDFYEVTSKTPNRAREAIAQMKAAALSGVNNKLFGLDGNISTNSENTERHT
FT                   ARDVNQNMHSLLGMGPQQ"
FT   mat_peptide     <1..633
FT                   /product="NIb replicase"
FT   mat_peptide     634..1428
FT                   /product="coat protein"
FT   3'UTR           1432..1684
XX
SQ   Sequence 1684 BP; 513 A; 296 C; 428 G; 447 T; 0 other;
     ggtaataata gtggtcagcc atccacagtt gtggacaata ccttgatggt ggtcattgcc        60
     atgtactact cgtgttgtaa gcaagggtgg tcagatgagg acatccaaga aaggttggtg       120
     tttttcgcca atggtgatga tattatcctg gcagttagtg ataaagatac atggttatat       180
     gacactctta gcatttcgtt cgctgagctt ggtctcaact acaactttga tgaacggaca       240
     aagagaagag aggagttatg gttcatgtca cacaaagcca tgttagttga tggaatctac       300
     attccaaaac ttgaacctga gagaattgtc tctattctag agtgggacag gagcaaagag       360
     cttatgcatc gcactgaggc gatatgtgca gcaatgattg aggcatgggg atacactgag       420
     ttgctacaag agattcgcaa gttctatttg tggctcttaa gcaaggatga atttaaggag       480
     ctcgcttcgt ctggaaaagc accatatatt gcagagacag ctttgagaaa gctgtataca       540
     gatgttaatg cgcagacaag tgagctacaa agatatcttg aggtactgga ctttaaccat       600
     gctgatgatt gttgtgaatc agtgtcctta caatcaggca aagagaagga aggagacatg       660
     gatgcaggca aagatccaaa gaagaacgcc agcagtagca aaggagctgg tgcgagcagt       720
     aaggatgtga atgttgggtc aaaagggaag gtggttccac gcctgcagaa gattacaagg       780
     aagatgaatc ttccaatggt tgaagggaag attatcctca gtttagacca cttgcttgag       840
     tataaaccta atcaagttga tttattcaat actcgggcaa caagaacaca gtttgaggca       900
     tggtacaatg cagtcaaaga tgaatatgaa cttgatgatg agcagatggg tgtcgtcatg       960
     aatggtttta tggtatggtg cattgataat ggcacgtctc cagatgccaa tggtgtgtgg      1020
     gtaatgatgg atggagagga gcagattgaa tacccactga agcccatcgt tgaaaatgca      1080
     aaaccaactc tgaggcaaat catgcaccat ttctcagatg cagcagaagc ttacattgag      1140
     atgagaaatt ctgaaagtcc atatatgcct agatatggac tactgaggaa tttgagagat      1200
     agggagttag cccgttatgc cttcgatttc tatgaggtca cctccaaaac accgaacagg      1260
     gcaagagagg caatagcaca aatgaaggct gcagctctct cgggagttaa caacaagctg      1320
     tttgggcttg atggaaacat ctcgaccaac tccgaaaata ctgaaaggca cactgcaaga      1380
     gatgtgaatc aaaacatgca ttctcttttg ggcatgggcc cacagcagta aaggctaggt      1440
     aaactggcca cagttatcat ttcgggtcgc tttatagttt actatagtat agtagttgca      1500
     cttcctttaa gtatagtgtg attgcatcac ctaataatac ttttgtttag agtggtctaa      1560
     ccaccttagt gtgctttata ttatagttta tgaatggcag ggagaaccat tgcaatgccg      1620
     gagccctttt caagagtgat tctatcatgc atagtggccg aggtacggca atgtttgttg      1680
     tcct                                                                   1684
//