ID   AJ292224; SV 1; linear; genomic RNA; STD; VRL; 1625 BP.
XX
AC   AJ292224;
XX
DT   06-FEB-2002 (Rel. 70, Created)
DT   06-FEB-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Onion yellow dwarf virus partial genomic RNA for polyprotein gene, isolate
DE   YH3
XX
KW   coat protein; NIb polymerase; polyprotein.
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1625
RA   Adams M.J.;
RT   ;
RL   Submitted (24-JAN-2001) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s007050170037.
RX   PUBMED; 11722009.
RA   Chen J., Chen J.P., Adams M.J.;
RT   "Molecular characterisation of a complex mixture of viruses in garlic with
RT   mosaic symptoms in China";
RL   Arch. Virol. 146(10):1841-1853(2001).
XX
DR   MD5; 5e339efc1c60291278afe20436dd9f47.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1625
FT                   /organism="Onion yellow dwarf virus"
FT                   /host="garlic"
FT                   /isolate="YH3"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Zhejiang"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1410
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:Q8QXP2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QXP2"
FT                   /protein_id="CAC83686.1"
FT                   /translation="GNNSGQPSTVVDNTIMVMLSVQYALRKCGIDLDKQSNIIKYFCNG
FT                   DDLLIAIHPDYEIILDQFKQYFHELGLDYDFSNRSKSKENVYFMSHRGLLRDGIYIPKL
FT                   DKERVVSILEWDRADKPEHRLEAICASMIEAWGYPDLVHEIRKFYQWLLEQAPYNMIAQ
FT                   DGKAPYIAETALKKLFTDIDASEAELEQYYEMYLALEDQEQIIKEVRYQAGETEDAAAQ
FT                   SSDARRITKQKDKDVDAGTTGKFTVPRIKALSDKMRFPKVGKNVVLNAEHLLAYKPEQI
FT                   ELYNTRATQRQFENWFMAVKKEYDVNDEQMKILLDGLMVWCIENGTSPNLSGNWTMMDG
FT                   DEQIEYPLAPVLDNAKPTFRQIMAHFSDAAEAYIEYRNATEKYMPRYGIQRNLTELSLA
FT                   RYAFDFYEMTSRTPKRAKEAHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADVN
FT                   KNQHTLLGIKM"
FT   mat_peptide     <1..636
FT                   /product="NIb polymerase"
FT   mat_peptide     637..1407
FT                   /product="coat protein"
XX
SQ   Sequence 1625 BP; 543 A; 279 C; 391 G; 412 T; 0 other;
     ggcaataaca gtgggcagcc gtctacagtc gttgacaaca caataatggt aatgttgagt        60
     gtacaatacg ccctgcggaa gtgtggtatt gatttagata agcagagcaa tatcataaag       120
     tatttctgta acggggatga tttgttgata gcgatacatc cggattacga gattatactt       180
     gaccagttta aacaatactt tcatgaacta gggttggatt atgatttctc gaataggagc       240
     aagtcgaagg agaacgttta cttcatgtcg catagaggat tactcaggga tggaatttac       300
     attccaaagt tggacaagga gcgtgttgta tcaattcttg agtgggatcg agcagacaag       360
     cccgaacacc gattagaagc tatatgtgca tctatgattg aagcatgggg ttatcccgac       420
     ttggtgcacg aaataaggaa attttatcag tggttactag aacaagctcc atacaatatg       480
     atagcgcaag atggtaaggc tccgtatata gcagagacag ctcttaagaa gctattcact       540
     gacattgatg cgagtgaggc tgaacttgag caatattatg agatgtatct agcattggaa       600
     gatcaagaac aaattattaa ggaagtccga taccaagctg gagagacaga agatgctgca       660
     gcacaatcaa gcgatgcaag gcgaatcaca aagcagaaag ataaggatgt tgatgctgga       720
     acaactggaa aattcacagt acctagaatc aaagcactct ccgataaaat gcgatttccg       780
     aaagtcggca agaatgtagt actcaatgcg gagcatctat tagcgtataa accagagcaa       840
     atagagctat acaatacgag agcgacacaa cgtcaatttg agaattggtt tatggcagtg       900
     aagaaggagt acgacgtgaa cgatgaacaa atgaaaattt tactggatgg gctaatggtt       960
     tggtgcattg aaaatggtac atctccaaac ctgtcaggta attggactat gatggatggt      1020
     gatgaacaaa ttgagtatcc attagcacca gttttagata atgctaaacc aacgtttaga      1080
     cagataatgg cgcactttag tgatgcagct gaagcataca ttgaataccg aaacgccacc      1140
     gaaaaataca tgccccggta tggaattcag cgcaatttaa cagaattgag tttagcacgt      1200
     tacgcattcg acttttatga gatgacttcg aggactccca agcgagcgaa agaagcacac      1260
     atgcaaatga aggcggcagc ggttagaggg gcaactaatc gcttgtttgg cctggatggt      1320
     aacgtaaaca ccacagaaga ggacacggaa agacacacgg cggcagatgt gaataaaaat      1380
     cagcacacgt tgctaggcat caaaatgtaa aatcgcacca atgtgtcttt agttttatat      1440
     aagtatattt atataaggac gtatgtaata tgtaattctc ttcgtttcgt ttaacctgac      1500
     tttgagcagt aaaatgtggt gtaccactag ctgtggcaaa cgatacggtt aaacatctgt      1560
     gattaatgtt gagcttcatg agtgtggttt tccacgaggt gaatcttagc gtgaattaca      1620
     gagac                                                                  1625
//