ID   AJ291706; SV 1; linear; genomic RNA; STD; VRL; 1900 BP.
XX
AC   AJ291706;
XX
DT   28-AUG-2001 (Rel. 68, Created)
DT   28-AUG-2001 (Rel. 68, Last updated, Version 1)
XX
DE   Rice black-streaked dwarf virus ORF1 and ORF2 genomic RNA, isolate Wuhan S9
XX
KW   ORF1; ORF2; P9-1 protein; P9-2 protein.
XX
OS   Rice black streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
XX
RN   [1]
RP   1-1900
RA   Adams M.J.;
RT   ;
RL   Submitted (10-NOV-2000) to the INSDC.
RL   Adams M.J., Plant Pathology Department, IACR-Rothamsted, Harpenden, Herts
RL   AL5 2JQ, UNITED KINGDOM.
XX
RN   [3]
RX   DOI; 10.1023/A:1011204010663.
RX   AGRICOLA; IND23240953.
RA   Zhang H., Chen J., Lei J., Adams M.J.;
RT   "Sequence analysis shows that a dwarfing disease on rice, wheat and maize
RT   in China is caused by Rice black-streaked dwarf virus";
RL   Eur. J. Plant Pathol. 107(5):563-567(2001).
XX
DR   MD5; e9e9f4656e94c545c4f106deb51b987e.
DR   EuropePMC; PMC4015479; 24131521.
DR   EuropePMC; PMC5818611; 29459698.
DR   EuropePMC; PMC6486993; 31029143.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1900
FT                   /organism="Rice black streaked dwarf virus"
FT                   /chromosome="S9"
FT                   /host="maize"
FT                   /isolate="Wuhan S9"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Wuhan"
FT                   /db_xref="taxon:10990"
FT   5'UTR           1..51
FT   CDS             52..1095
FT                   /product="P9-1 protein"
FT                   /function="unknown"
FT                   /note="ORF1"
FT                   /db_xref="InterPro:IPR009268"
FT                   /db_xref="UniProtKB/TrEMBL:Q91E20"
FT                   /protein_id="CAC59959.1"
FT                   /translation="MADQERRTFGSYKIEELTIKNDQPNRNTNSSTSQSTENRLSTKKI
FT                   PLLDDGIFELLNYLIDGTNFDKTCYCGFNYSHLPNLERDFNVASIYVRENFELCTENLD
FT                   LKDYDRQANISVKSPDFTLLLEYTLKPSSETDPAIPENEKEENAKPVTPKVVTPKEEKK
FT                   TVEMSLLPILNRESEESLSSEILEGEAAVVNVFKMYIKGFLMYLGENPNSYDRQLNIEK
FT                   YRPLLISIIGYEHLIGTRVPNKEVNHIFYQLATFDNYPFDLLRFQLSSLISTPALIREK
FT                   IAKEGLFKIITSNTLRGASRQTVLFRGINGSESFLNIKRYRKFRTRIVGNVDCVIKSDF
FT                   SSLKLDV"
FT   misc_feature    1096..1159
FT                   /note="intergenic region, IGS"
FT   CDS             1160..1789
FT                   /product="P9-2 protein"
FT                   /function="unknown"
FT                   /note="ORF2"
FT                   /db_xref="GOA:Q91E19"
FT                   /db_xref="InterPro:IPR009650"
FT                   /db_xref="UniProtKB/TrEMBL:Q91E19"
FT                   /protein_id="CAC59960.1"
FT                   /translation="MNPQSSVNVDTYTFNCPFELAKIQIESMKPIMQDFSNFDDIFNRT
FT                   LSDSEIDDRVEQLEVDVESKVDPIVRRRYGKIGHIIIMIIRFVFFGIFKLTLKMFYHLF
FT                   RCVCCNPLIRGILSIIFTILFYFLLCVCIYFVYYFFGDQISSAYNTLNQIDSSNFINST
FT                   QVEEKVKNIIHDGSLFFGTRDQATGQINEIETQVVNGGTVNYTLFN"
FT   3'UTR           1790..1900
XX
SQ   Sequence 1900 BP; 612 A; 328 C; 311 G; 649 T; 0 other;
     aagtttttta gcctggaact gacacattcc tacaggaacg agcgtaagag aatggcagac        60
     caagagcgga gaacgtttgg atcatataaa atagaagaat tgacaattaa aaacgaccaa       120
     ccaaatagaa acacaaattc atcgacttct caatctactg aaaatcgtct ttcaaccaag       180
     aaaatccccc tactcgatga cggcatcttc gaacttctga actaccttat tgatggaacc       240
     aacttcgaca aaacttgcta ttgtggtttt aattattctc atctccctaa ccttgaacgt       300
     gactttaacg ttgcatctat ttatgtccgc gagaattttg aattatgcac tgaaaactta       360
     gatttgaaag attatgatag acaggcaaat ataagcgtga aatctcctga ttttactttg       420
     cttctagaat atactcttaa accatcatca gaaaccgatc ctgctattcc agagaatgag       480
     aaagaagaga atgctaaacc agttactcct aaagttgtca ctccaaaaga agagaagaaa       540
     acagttgaaa tgtcattgtt gccaattctg aaccgtgaat ctgaagaatc tttaagctct       600
     gaaattcttg aaggtgaagc tgctgtcgtt aatgtattca aaatgtatat aaaaggcttt       660
     ttaatgtatt tgggtgaaaa tccaaactct tatgaccgtc aattaaacat agaaaagtat       720
     cgtcctttgc taatttcaat catcggatat gaacatctca tcggaacaag agttccaaat       780
     aaagaagtta atcacatttt ttaccagttg gcgacttttg ataactaccc ttttgaccta       840
     ctgagattcc agctttcttc actcatctct acacccgctt taatccgaga aaaaattgct       900
     aaagaaggat tattcaagat tattacgtca aacaccctgc gtggtgcttc ccgtcaaact       960
     gtcttattta gaggaattaa tggaagtgaa tcgtttttga acatcaagag atatcgtaaa      1020
     ttcaggacac gaattgttgg caatgttgat tgcgttatta aatctgattt ttcttccttg      1080
     aaattggacg tttgatcttt tactttttat gttctgaaaa ttgaatatca ctggttaatg      1140
     aatcatttcc tttaatttta tgaaccctca atcttcagta aatgttgata cttatacttt      1200
     taactgtccc tttgaactag caaaaattca aattgaatcg atgaaaccta ttatgcaaga      1260
     ttttagcaat tttgatgata tctttaatcg tacattatct gattctgaaa ttgatgatcg      1320
     cgtagaacag cttgaagttg acgtcgaatc aaaagtcgat ccaattgtga gaagaagata      1380
     tggtaaaatt ggacatatca tcattatgat tatcagattt gtattttttg gtatttttaa      1440
     gcttactctt aagatgtttt atcatttgtt tcgttgtgtg tgttgtaatc ctttgattag      1500
     aggtatactt agtatcattt ttaccatatt attttatttt ctactgtgtg tgtgcattta      1560
     ttttgtttat tacttttttg gagatcaaat ttcatcagcg tacaacactt tgaatcaaat      1620
     tgatagttct aattttataa attctactca agttgaagaa aaagttaaaa atataattca      1680
     cgacggttca ctctttttcg gtacgcgtga tcaagcaaca ggtcaaatta acgaaattga      1740
     aactcaagtt gtaaatggtg gtactgtaaa ctatacgctt tttaattaac gtctattttg      1800
     tatgactctg aaaatattca cgctcgcaag tcgattctct tacagttatg tcttttgagg      1860
     tatgacaaac tcgttctcaa gccggctaac agctatcgtc                            1900
//