ID   AJ290434; SV 1; circular; genomic DNA; STD; VRL; 1005 BP.
XX
AC   AJ290434;
XX
DT   03-JUL-2000 (Rel. 64, Created)
DT   20-SEP-2000 (Rel. 65, Last updated, Version 2)
XX
DE   Subterranean clover stunt virus m-rep gene for 33.24 kDa master Rep protein
DE   (SCSV8)
XX
KW   m-rep gene; master Rep protein.
XX
OS   Subterranean clover stunt virus
OC   Viruses; Nanoviridae; Nanovirus.
XX
RN   [1]
RP   1-1005
RA   Katul L.;
RT   ;
RL   Submitted (02-MAY-2000) to the INSDC.
RL   Katul L., Inst.Plant Virology, Microbiology and Biosafety, Federal Biol.
RL   Res. Centre for Agriculture and Forestry, Messeweg 11-12, 38104
RL   Braunschweig, GERMANY.
XX
RN   [2]
RX   DOI; 10.1006/viro.2000.0439.
RX   PUBMED; 10936099.
RA   Timchenko T, Katul L., Sano Y., de Kouchkovsky F., Vetten H.J.,
RA   Gronenborn B.;
RT   "The master rep concept in nanovirus replication: identification of missing
RT   genome components and potential for natural genetic reassortment.";
RL   Virology 274(1):189-195(2000).
XX
DR   MD5; 8580119f59b8a5af8eda875ca287d2ea.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1005
FT                   /organism="Subterranean clover stunt virus"
FT                   /host="Trifolium subterraneum L."
FT                   /isolate="F"
FT                   /mol_type="genomic DNA"
FT                   /country="Australia"
FT                   /db_xref="taxon:36772"
FT   stem_loop       1..29
FT   CDS             112..972
FT                   /transl_table=1
FT                   /gene="m-rep"
FT                   /product="33.24 kDa master Rep protein"
FT                   /function="replication initiator protein"
FT                   /db_xref="GOA:Q9ICP7"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9ICP7"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="CAB96405.1"
FT                   /translation="MARQVICWCFTLNNPLAPLSLHESMKYLVYQTEAGDNGTIHYQGY
FT                   VEMKKRTSLVQMKKLLPGAHLEKRRGSQGEARAYAMKEDSRVEGPWEFGEFKEVLEDKL
FT                   RSVMEDMKSTGKRPVEYIEDCCNTYDKSSATLREFRGELKKKQAIEEWQLQRQPWMDEV
FT                   ERLMETKDCRRIIWVYGPQGGEGKTSYAKHLVKTRDAFYSTGGKTADIAFAWDHQELVL
FT                   FDFPRSFEEYVNYGVIEQLKNGIVQSGKYQSIVKYCNYVEVIVFANFIPRSGMFSEDRI
FT                   VIVYA"
XX
SQ   Sequence 1005 BP; 304 A; 152 C; 267 G; 282 T; 0 other;
     ggcacggggc ttagtattac ccccgtgccg gggtcagaga catcacgtga ctctcacatt        60
     attgtttaat atatatatgt gtgttgggtt gattatttta ttcaataaaa tatggctaga       120
     caagttatat gctggtgctt tacattaaac aatcctctcg ctcctctctc tcttcatgaa       180
     agtatgaaat acttagttta tcagactgaa gctggtgata atggaactat tcattatcaa       240
     ggctatgtgg aaatgaagaa gagaacttct ctggtgcaaa tgaagaaatt gcttcctggt       300
     gctcatctgg agaagagaag aggttcacaa ggagaagcta gagcttatgc tatgaaagaa       360
     gattcaaggg ttgaaggtcc ttgggagttt ggagagttta aggaggtttt ggaagataag       420
     ctgcgttctg tcatggaaga catgaaatca actgggaaac gtccagttga gtatatagaa       480
     gattgttgta acacttacga caaatcttct gcaacgctga gagagtttag aggagaattg       540
     aagaagaaac aggcaattga agagtggcag ttgcagaggc agccatggat ggacgaggtt       600
     gaaagattga tggagacgaa ggactgtaga cgaataattt gggtgtatgg cccacaaggt       660
     ggagaaggga agacatcgta cgcaaagcat cttgtgaaga cgcgtgatgc tttttactcg       720
     acaggcggaa agacagccga catagctttt gcgtgggacc atcaagagtt agtgctattc       780
     gactttcctc gaagcttcga ggaatacgtc aattacggcg tcattgaaca gctaaagaat       840
     ggcattgtac agtctggaaa gtatcaaagt attgtaaagt attgtaatta tgtagaagtt       900
     attgtatttg ctaattttat tccgcgaagc ggtatgttta gtgaggatag gattgtaatt       960
     gtgtatgcgt aagtgagatg acgtcatatg tctccgcgac aggct                      1005
//