ID AJ277435; SV 1; linear; genomic RNA; STD; VRL; 3969 BP. XX AC AJ277435; XX DT 04-MAY-2000 (Rel. 63, Created) DT 16-OCT-2000 (Rel. 65, Last updated, Version 3) XX DE Olive latent ringspot virus genomic RNA for polyprotein gene XX KW coat protein; polyprotein. XX OS Olive latent ringspot virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-3969 RA Grieco F.; RT ; RL Submitted (14-APR-2000) to the INSDC. RL Grieco F., Centro di Studio Virus e Virosi delle Colture Mediterranee, RL Consiglio Nazionale delle Ricerche, via Amendola n.165/A, 70126, ITALY. XX RN [2] RA Alkowni R., Grieco F., Martelli G.P.; RT "Complete nucleotide seuence of RNA-2 of olive latent ringspot virus"; RL Arch. Virol. 145:1-7(2000). XX DR MD5; de58746b5a92d0843b96a8b388509a91. DR EuropePMC; PMC3314827; 22218961. XX FH Key Location/Qualifiers FH FT source 1..3969 FT /organism="Olive latent ringspot virus" FT /host="Olive" FT /lab_host="Chenopodium quinoa" FT /strain="Olive" FT /mol_type="genomic RNA" FT /country="Italy" FT /db_xref="taxon:121429" FT 5'UTR 1..138 FT CDS 139..3576 FT /product="polyprotein" FT /db_xref="GOA:Q9IV56" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9IV56" FT /protein_id="CAB90217.1" FT /translation="MVKFTTERLAQFALAWNLGNGTYPNPPPVWLYPTLVGYVSKGPGR FT ALFPIAVKSAIKAGWEPVFLIFPEARPTSVPTAAAPVKADWGPLEAYEPLCFPLPLPGA FT GSAFTLLSAHCPRLLLKRRKRTMTSSSLRGLFPRSLVRRETPFMRVMALASEAKESEEA FT EIASAFDELPLEYPQEEFVPDLLARLRGAIQDGKRFRLKEAAELAVREAAAAARLKERQ FT RIALKCAMQAASMEPVYLSFSPRVVEMIARSPVGQGSHIHTLQSEGGQIPIEPAPNFQG FT RSQMVGSSSGAVSAPYKQEARNKWLRNRRSQIDSQEDNIRKYADQQGISFENARAAFLG FT ATEAIPRQDPILPPLKLAYKRRGTFAFGPSTRAQRTLDVRLGQPTQNGQSMVYYFNPVS FT QQEIQDAQGQGNDTVVIDAIEISILPFGMPGDATDITGVVMWAQNSDPERAFIGSLSTF FT VGNGLARAIFFPQLHLSYEHCQVPDNRVLKVILSSTNSTMVGDLVQARVSLGTLRQHIG FT PGHDRTITRDLQNSQVLGLQLKATQLGSAVTTAPSGGEVIGIPDANVDLGGDTTLEQTG FT TFSFALRRAQSQRFEILGSRRSRPSVSREEDVRNLEAARHSFMEAKAGSTQQESERPVD FT LVGVKWVSVPKDAKQSAFLGTHNFREIAKEYAGEFYNRWVYNRNISPCILVRCHLPKMP FT FLGLTLGMCADFYNRIKPSDMANELPPSVAFSLPHRLMHFNAIDGPVDYIYDVGESCGH FT SIYVDSASFSEPLFHFFCATSNHLLGAGNWRFLVEYYVYRDSPDVTFVDRPLCILPLSP FT SVVHNLDRTLGPFSISIDANSHETYHGIDLGSDLMTDKGKIANFSSAWFSHWLGFQGIL FT HGRITVSSPITCTSIFLLCMCYKRNASAYTSIYRKRHITLEGGGNFSFPLDSPFSSAPT FT RYVSTADSSSGCELYVDTICGPIAPADSVTKLEYFLHFDRLEGTMTAPNLVAEIGSLWC FT RVTSFLKEDVDIPIRARIYDIAAKDCTLELATNPFSKMIAATGFLEGQVTLSVSWSTNV FT EASKIKGHIIFVVYDADLVNSFDGASTVVPMAKGSFKCLLNCKTSARGTTSADPSLLTA FT WMMIKVHHAKDIQELRVNVIPQTGFKFYGRSAEAIKVP" FT mat_peptide 2005..3576 FT /product="coat protein" FT 3'UTR 3577..3969 XX SQ Sequence 3969 BP; 936 A; 882 C; 953 G; 1197 T; 1 other; natgaaaata acttttcacc aaaccatcta ctgtctcttt ccttccttta ttgttttgtg 60 ttggattgaa caaccgccat cattttgttt ttagtttatt ttctgttctt ggttcttctt 120 gctaggttgg ccaccggaat ggtcaaattc accactgagc gcctggctca gtttgccctt 180 gcctggaatc tgggcaatgg cacctaccct aatccccctc ccgtttggtt atatcccacg 240 ttagtgggat atgtttcaaa gggccctggt agggcccttt tcccgatcgc cgttaagagc 300 gcgattaagg caggttggga acctgtcttt cttatttttc ctgaggcccg accaacctca 360 gttcccaccg ctgctgcccc ggttaaggca gattggggac cattagaggc ttacgagcct 420 ttgtgtttcc ccctccctct tcccggtgcg ggaagtgcgt tcactctgtt gagcgcacat 480 tgcccccgct tactgctgaa gaggaggaag aggaccatga cctcttcctc tctcagaggc 540 ctcttcccga ggtctcttgt gaggagagag actcccttta tgagagtgat ggccttggcg 600 tctgaagcca aggagtctga ggaggctgaa attgcctctg cttttgacga gctccctctg 660 gaatatcccc aggaggagtt tgtccctgac ctgttggccc gcttgcgcgg tgccattcag 720 gatggcaagc gcttccgtct gaaggaagct gctgagttgg cggttcgaga ggccgctgct 780 gctgctcgcc ttaaagagcg gcaaagaatt gcgctgaaat gcgcaatgca ggctgccagt 840 atggagcctg tctacctgtc cttctctcca cgtgtggtgg agatgattgc gaggagtcct 900 gttggacagg gctctcatat ccacaccctc caatcggaag gagggcaaat tccgattgag 960 cctgccccga attttcaggg tagatcccaa atggtgggct cttcttcagg tgctgtgtct 1020 gcaccttata aacaagaggc acgaaataag tggctgcgaa atcggcggtc tcaaatcgat 1080 tcccaagagg acaacatacg caagtatgct gaccagcagg gaatctcttt tgagaatgct 1140 cgcgcagctt ttcttggcgc cacggaggct attccaaggc aagatcctat tttgcctcca 1200 ctgaaattgg catacaagag aagggggacc tttgcttttg gtccttccac acgggcacag 1260 cggacactgg atgtgagact tgggcaacca actcagaatg gccaatctat ggtctactat 1320 ttcaatccag tgtcccaaca agagatccag gatgctcaag ggcagggcaa cgataccgtt 1380 gtcattgatg ctattgagat ttccatattg ccatttggca tgcctggaga cgccactgac 1440 attaccggag ttgtcatgtg ggcacaaaat tctgatccgg aaagggcgtt cattggctca 1500 ctttctacat tcgtgggcaa tggactggca cgtgcaattt tctttccaca attgcattta 1560 tcatatgagc actgccaggt cccagataac cgtgttttga aggtcattct ctcatctact 1620 aattcaacaa tggtgggaga tttggttcaa gcgcgcgttt ctctgggaac gcttagacaa 1680 catataggac ctgggcatga tagaactatc acgcgggatt tgcaaaattc ccaggtccta 1740 ggtttacagc taaaagctac acagcttggg tctgctgtaa ccactgctcc ttcaggtgga 1800 gaagttattg ggatacctga cgccaatgtg gacctagggg gcgatacaac cctagagcaa 1860 acgggcactt tttctttcgc tctcagaaga gcacaaagtc agagatttga gatcttagga 1920 tctcgaagat ctaggcctag tgtttctcgt gaagaggacg ttagaaatct agaagctgcc 1980 aggcattcct ttatggaagc caaagctggt tcaacccaac aggaatcgga acgtccagtt 2040 gatttggttg gtgtgaagtg ggtctcagta cccaaagatg ccaaacagtc tgcgttcctg 2100 ggcactcata attttagaga gattgccaag gaatatgctg gagaatttta taatcgttgg 2160 gtttataata gaaatataag tccgtgcatt cttgtcagat gccatttgcc aaaaatgccc 2220 tttctgggcc taactttagg catgtgcgcg gatttttata atagaattaa gccatctgac 2280 atggcgaatg agttgccacc ttctgtggct tttagtctcc cacaccgact catgcatttt 2340 aatgcaatag atgggccagt tgactacatc tatgatgttg gagagtcgtg tgggcatagt 2400 atatatgtag atagtgctag tttttcggaa cctttgttcc atttcttttg cgctaccagc 2460 aatcatttgt tgggagcggg caactggcgt ttcttagttg agtattatgt ttatagagat 2520 tcgccagatg tcacttttgt agatagaccc ttgtgtattt tacctttaag tcccagtgtt 2580 gtccacaatt tagatcgtac attgggacct ttttctatta gtatagatgc caattctcat 2640 gaaacttatc atggaattga tttaggtagt gaccttatga ccgacaaagg gaagatcgca 2700 aatttttcta gtgcgtggtt ttctcattgg cttggttttc agggtatttt acatgggaga 2760 attactgttt catctcccat tacttgtaca tctatttttc ttttatgcat gtgttataag 2820 cgtaatgcct ccgcttatac tagtatatat cgtaagaggc atattacttt agaaggcgga 2880 ggaaattttt cttttccttt agatagtcct ttttcttccg cccccaccag atatgtgtcc 2940 acagcagact ctagttctgg ttgtgaatta tacgtggaca caatttgtgg gcctatagct 3000 ccagctgatt ctgtcacaaa gctggagtat tttttacatt ttgacagatt ggaagggact 3060 atgacagcac caaatttggt tgctgaaata gggtcattgt ggtgccgtgt cacctctttt 3120 cttaaggagg acgtcgatat tcctattcgt gcacgcattt atgacatagc ggccaaggat 3180 tgcacccttg agctggcgac caaccctttc tctaaaatga tagctgctac aggatttcta 3240 gaaggccagg taacactttc tgtttcctgg tccacaaacg tcgaagcatc caaaatcaag 3300 ggacatatca tttttgttgt ctatgacgca gatttggtaa attcctttga tggtgcttct 3360 acagtggttc cgatggccaa gggttctttc aagtgtttgc ttaattgcaa aactagtgcc 3420 agagggacca caagtgcaga ccccagtcta ttaactgcct ggatgatgat taaggtgcat 3480 catgctaagg atatccagga gttacgtgta aatgttattc cacagactgg tttcaaattt 3540 tatggtagga gtgctgaggc tattaaagta ccttagcgcg tcttttcttt tcttttgtaa 3600 taagagactg gccctccgtc tttaaacgag ggtaaagtct gttgattatc gtctaccggg 3660 gtggtaccca agggacgaca gctggttgga aatagttttt ctcagagtgg tgacgtgctc 3720 tatccaactg aaaggtttgg tgtttactag taaagcaggc tggttttgat gggccagcga 3780 ggtaaaggtg tgccacagct tgctctgtgg gcataataac tcaaaatcta catcctagtt 3840 tagttttgtt ttcaattcct agactcctgt gagccttatg caatagcagg tcggaccttc 3900 agtaagtcca caaaaatatt tgagtttttc cgttcttgat ttctttttct aaagtcttcc 3960 ttgtccgga 3969 //