ID AJ276480; SV 1; linear; genomic RNA; STD; VRL; 3053 BP. XX AC AJ276480; XX DT 13-MAR-2000 (Rel. 63, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 5) XX DE Cucumber mosaic virus (strain Mf), complete RNA2 segment XX KW 2A gene; 2B gene; 2b protein; complete genome; polymerase; RNA2. XX OS Cucumber mosaic virus (strain Mf) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3053 RA Choi J.; RT ; RL Submitted (10-MAR-2000) to the INSDC. RL Choi J., Division of Biological Environment, Kangwon National University, RL Chuncheon, Hyoja-dong, Chuncheon, 200-701, SOUTH KOREA. XX RN [2] RA Choi J.K., Kim H.J., Ryu K.H., Lee S.Y.; RT "Complete nucleotide sequence of genomic RNAs of cucumber mosaic RT cucumovirus Mf strain and generation of infectious RNA transcripts"; RL Unpublished. XX DR MD5; de12f44e7a1c2ae6ec31283fe65094d7. DR BioSample; SAMEA3283058. DR EuropePMC; PMC136033; 11884564. DR RFAM; RF01084; TLS-PK3. XX CC Related sequences: AJ276479, AJ276481 XX FH Key Location/Qualifiers FH FT source 1..3053 FT /organism="Cucumber mosaic virus (strain Mf)" FT /segment="RNA2" FT /strain="Mf" FT /mol_type="genomic RNA" FT /country="South Korea" FT /note="subgroup IA" FT /db_xref="taxon:255721" FT CDS 85..2658 FT /gene="2a" FT /product="polymerase" FT /db_xref="GOA:Q9IVE4" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9IVE4" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAB77387.1" FT /translation="MASLAPAFSLANLLNGSYGVDTPEDVERLRSEQREEAAAACRNYR FT PLPAVDVSESVTEDAHSLRTPDGAPAEAVSDEFVTYGAEDYLEKSDDELLVAFETMVKP FT MRIEQLWCPAFNKCSFISSIAMARALLLAPRTSNRTMKCFEDLVAAIYTKSDFYYGEEC FT EADDVQIDISSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTLAIPPDLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLASSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKSITSQFSPLFTALFERFQRCLRERIILPVGKISSLEMVGFDVKNKHCLEID FT LSKFDKSQGEFHLLIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLIFSGDDSLGFSLLPPVGDPSKFTTLFNMEA FT KVMEPAVPYTCSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVD FT RLKFLDRMSQSCIDQLSIFFELKYKKSGEEAALMLGAFKKYTANFQSYKELYYSDRRQC FT ELINSFCSTEFRVERVNSNKQRKKYGIERRCNDKRRTPTGSYGGGEEAETKISQAESTG FT TRSQKSQRESAFKSQTVPLPTVLSSRWFGTDRVEPPCERGGVTRA" FT CDS 2417..2755 FT /gene="2b" FT /product="2b protein" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:Q9IVE3" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAB77388.1" FT /translation="MELNVGAMTNVELQLARMVEAKKQRRRSHKQNRRERGHKSPSERA FT RSNLRLFRFLPFYQVDGSELTGSSRHVNVAELPEPEASRLELSAEDHEFDDTDWFAGNE FT WAEGVFFF" XX SQ Sequence 3053 BP; 773 A; 675 C; 711 G; 894 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc cctagacttt 60 aaaactttct ttctagtatt ttctatggct tctcttgccc ccgcattctc actagccaat 120 cttttgaacg gtagttacgg tgtcgacact cccgaggatg tggaacgttt gcgatctgag 180 caacgtgaag aggctgctgc ggcctgtcgt aactacaggc ccctacccgc tgtggatgtc 240 agcgagagtg tcacagagga cgcgcattcc ctccgaactc ctgatggagc tcccgctgaa 300 gcggtgtctg atgagtttgt aacttatggt gctgaagatt accttgaaaa atctgatgat 360 gagctccttg tcgcttttga gacgatggtc aaacccatgc gtatcgaaca actatggtgc 420 cccgcgttta ataaatgttc ttttatttcc agcattgcta tggccagagc tttgctgttg 480 gcacctagaa catccaaccg aaccatgaag tgttttgaag acctggtcgc ggctatttac 540 actaaatctg atttctatta tggtgaagag tgtgaagccg acgacgttca gatagatatc 600 tcgtctcgcg atgtacccgg ttattctttc gaaccgtggt cccgaacgtc tggattcgaa 660 ccgccgccca tttgtgaagc gtgcgacatg atcatgtacc agtgcccgtg ttttgatttc 720 aatgctttga agaaatcgtg cgctgagagg actttcgctg atgactatgt tattgaaggt 780 ttagatggtg ttgttgataa tgcgactctg ttgtcgaatt tgggtccatt tttggtaccc 840 gtgaagtgtc aatatgaaaa atgtccaaca ccaaccctcg cgattcctcc ggatttaaat 900 cgtgctactg atcgtgttga tatcaattta gttcaatcca tttgtgactc gactctgccc 960 actcatagta attacgacga ctcttttcat caagtgttcg tcgaaagtgc agactactct 1020 atagatctgg atcatgttag acttcgacag tctgatctta ttgcgaaaat tccagattca 1080 gggcatatga taccggttct gaacaccggg agcggtcaca agagagtagg tacaacgaag 1140 gaggtcctta cagcaattaa gaaacgtaat gctgacgttc cagagctagg tgattccgtt 1200 aatctgtcta gattgagtaa agctgtggct gagagattct tcatttcata catcaatggt 1260 aactctctag cgtccagtaa ctttgtcaat gtcgttagta acttccacga ttacatggaa 1320 aaatggaagt cctcaggtct ctcttatgat gatctcccag atcttcatgc tgagaatttg 1380 cagttttatg atcacatgat aaaatctgat gtgaaacctg tggtgagcga cacactcaat 1440 attgacagac cggttccagc tactataacg tatcataaga agagtataac ctcccagttc 1500 tcaccgttat tcacagcgct attcgagcgc ttccagagat gccttcgaga acgtattatt 1560 cttcctgttg gtaagatttc atcccttgag atggtagggt ttgatgtcaa aaacaagcac 1620 tgcctcgaaa ttgatctgtc taagtttgat aaatctcagg gtgaattcca tttgctaatt 1680 caggaacata ttttgaatgg tctaggatgt ccagctccga taactaagtg gtggtgtgat 1740 tttcaccgat tctcttacat tagagaccgt agagctggtg ttggtatgcc tattagtttc 1800 cagagacgaa ctggtgatgc attcacttat tttggcaata ccattgtcac catggcagag 1860 tttgcctggt gttacgacac cgaccaattc gaaaagctta tattctcagg cgatgattct 1920 ctaggatttt cattgcttcc ccctgttggc gatccgagta aattcacgac tcttttcaac 1980 atggaagcta aggtgatgga acctgcagta ccatatactt gttcgaagtt cttactctct 2040 gacgagttcg gtaacacatt ttccgttcca gatccattgc gcgaggttca gcggttagga 2100 acaaagaaaa ttccctattc tgacaatgat gaattcttgt ttgctcactt catgagcttt 2160 gttgatcgat tgaagttttt ggaccgaatg tctcagtcgt gtatcgatca gctttcgatt 2220 ttctttgaat tgaaatacaa gaagtctggg gaagaggctg ctttaatgtt aggcgccttt 2280 aagaaatata ccgctaattt tcagtcctac aaggaactct actattcaga tcgtcgtcag 2340 tgcgaattga tcaattcgtt ttgtagtaca gagttcaggg ttgagcgtgt aaattccaat 2400 aaacagcgaa agaaatatgg aattgaacgt aggtgcaatg acaaacgtcg aactccaact 2460 ggctcgtatg gtggaggcga agaagcagag acgaagatct cacaagcaga atcgacggga 2520 acgaggtcac aaaagtccca gcgagagagc gcgttcaaat ctcagactgt tccgcttcct 2580 accgttctat caagtagatg gttcggaact gacagggtcg agccgccatg tgaacgtggc 2640 ggagttaccc gagcctgagg cctctcgttt agagttatcg gcggaagacc atgagtttga 2700 cgatacggat tggttcgccg gtaacgaatg ggcggaaggt gttttttttt tttgaaacct 2760 ccccttccgc aactccctcc ggtcctgtga cgggagctga gttggcagta ttgctataaa 2820 ctgtctaaag tcactaaaca cattgtggtg aacgggttgt ccatccagct tacggctaaa 2880 atggtcagtc gtggagaaat ctacgccagc agacttacaa gtctctgagg cacctttgga 2940 accatctcct aggtttcttc ggaaggactc cggtccgtgt acttctagca caacgtgcta 3000 gttttagggt acgggtgccc cccactttcg tgggggcctc cataaggaga cca 3053 //