ID AJ276479; SV 1; linear; genomic RNA; STD; VRL; 3357 BP. XX AC AJ276479; XX DT 13-MAR-2000 (Rel. 63, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 4) XX DE Cucumber mosaic virus (strain Mf), complete RNA1 segment XX KW 1A gene; complete genome; replicase; RNA1. XX OS Cucumber mosaic virus (strain Mf) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3357 RA Choi J.; RT ; RL Submitted (10-MAR-2000) to the INSDC. RL Choi J., Division of Biological Environment, Kangwon National University, RL Chuncheon, Hyoja-dong, Chuncheon, 200-701, SOUTH KOREA. XX RN [2] RA Choi J.K., Kim H.J., Ryu K.H., Lee S.Y.; RT "Complete nucleotide sequence of genomic RNAs of cucumber mosaic RT cucumovirus Mf strain and generation of infectious RNA transcripts"; RL Unpublished. XX DR MD5; f6d79254b66d165414bc3073be532d7b. DR BioSample; SAMEA3283058. DR EuropePMC; PMC136033; 11884564. DR RFAM; RF01084; TLS-PK3. XX CC Related sequences: AJ276480, AJ276481 XX FH Key Location/Qualifiers FH FT source 1..3357 FT /organism="Cucumber mosaic virus (strain Mf)" FT /segment="RNA1" FT /strain="Mf" FT /mol_type="genomic RNA" FT /country="South Korea" FT /note="subgroup IA" FT /db_xref="taxon:255721" FT CDS 96..3077 FT /gene="1a" FT /product="replicase" FT /db_xref="GOA:Q9IVE5" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9IVE5" FT /experiment="experimental evidence, no additional details FT recorded" FT /protein_id="CAB77386.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKAAHEQLEEQLQHQRRGR FT KVYVRNVLSVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFGGSWVTHYLRGHNVHCCSPCLGIRDKMRHTERLMNMRKIILNDPQQFDGRQ FT PDFCTHHAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GIIPELNCQWRKIKNAFSETEDVTPLVGKLNSTAFTQVRKFKTLVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYKGMTYGIERCVINAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVKWKTVRILTSTLRETEEIAMRCSNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASFIWKWFAAMTR FT RLRVFFSSVVHALFPTLKPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKVLAEQKAEKLAEKLAQPVSEVSDSPETSSQTPDDTADVCGKEREVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIHFSTGRWMRPVPEGIVYSVGYNERGLGPKSDGELYIVNRECVICNSES FT LSVVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFEPSTDMIVTANKKSAQDVRMALFKS FT TDSKEACAFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVKRSVTSRAIATVTLVDLDSSRFYLTMTQADKASLISRAKEMNLPKTFWNERIK FT TVHESQGISEDHVTLVRLKSTKCDLFKQFSYCLVALTRHKVTFRYEYCGVLNGDLIAEC FT VARA" XX SQ Sequence 3357 BP; 860 A; 721 C; 799 G; 977 T; 0 other; gtttatttac aggagcgtac ggttcaaccc ctgcctcccc tgtaaaacta ccctttgaaa 60 acctctcttt cttaatcttt tctttgtaaa ttcctatggc gacgtcctcg ttcaacatta 120 atgaattggt agcctcccac ggcgataaag gactactcgc gaccgccctc gttgataagg 180 cagctcatga gcagctcgag gagcaattac agcatcaacg caggggccgt aaggtctacg 240 ttcggaatgt actgagcgta aaggattctg aggtcatccg gaatcggtat ggaggaaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcttc aggtctgcgg caggacctcg 420 tcttagactt cggaggaagt tgggtcacac attacctccg cggacataac gtacactgtt 480 gttccccttg tttgggtatt cgtgacaaaa tgcgccacac ggaacgatta atgaacatgc 540 gcaagatcat cttgaacgat ccacaacagt tcgatggtcg acagcctgat ttttgcactc 600 atcatgctgc agattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt tagaggattg tgtgaagcga tgaacgctca cgggaccact attttgaagg 720 gaacgatgat gttcgatggt gccatgatgt ttgacgatca aggtataatt cctgaactta 780 attgccagtg gaggaagatt aagaacgctt tctccgaaac tgaagacgtc accccactgg 840 tcggtaaatt gaattccaca gcattcaccc aagtgcgtaa attcaagact ttggtagctt 900 tcgatttcat caacgaatct actatgtctt atgttcatga ttgggagaat ataaaatctt 960 ttcttacgga ccagacttat tcctataaag gaatgactta tggtattgag cgttgtgtca 1020 tcaatgctgg tatcatgacg tacaagatta taggagtacc tggtatgtgt ccacccgaac 1080 tcattcgaca ttgtatttgg ttcccctcta ttaaggacta tgttggtcta aagattcccg 1140 cgtcgcagga cttggttaag tggaaaacag tgcgtatttt aacgtcaaca ttgcgtgaaa 1200 ctgaagagat tgctatgagg tgttctaatg ataagaaagc atggatggaa caatttaagg 1260 ttatcttagg tgttctatct gctaagtcat ctactattgt tatcaatggt atgtccatgc 1320 agtctggcga acggatagat atcaatgatt accattacat tggtttcgcc atccttcttc 1380 acacaaaaat gaaatatgag cagctaggaa aaatgtatga tatgtggaac gcttcgttta 1440 tttggaagtg gttcgcagcg atgactcgtc gcctgcgcgt atttttctct agtgttgttc 1500 acgcgctgtt cccgactttg aaaccccgtg aggaaaaaga attcctgatt aagctctcca 1560 ccttcgtaac ttttaatgaa gagtgctcat ttgacggtgg agaggaatgg gacgtgatat 1620 catccgctgc atacgttgct acgcaggctg ttactgatgg gaaagttttg gctgaacaga 1680 aagccgagaa gcttgctgag aagcttgcac aacccgtgag tgaggtatca gacagccctg 1740 agacgtcatc tcaaacgcct gatgatactg ctgatgtttg tggaaaggag cgagaggttt 1800 cggaactcga ctccctatca gctcagacac gttcccccat cactagagtt gctgaaaggg 1860 ctactgctat gttagagtat gccgcttatg agaaacaatt gcatgacact acggtgtcta 1920 atttgaaacg tatttggaat atggcgggtg gtgatgacaa gagaaattcc ctcgagggta 1980 atttgaagtt tgtcttcgac acgtatttca ctgttgatcc tatggtgaac attcatttct 2040 ccacgggtcg gtggatgcgt cctgtgcctg agggtattgt ttactctgtc ggttataatg 2100 aacgcggttt gggtccgaag tctgatggag agctttacat tgtcaataga gaatgcgtga 2160 tttgcaacag tgagtcttta tctgttgtca cgcgttctct tcaagctcca accggaacca 2220 ttagtcaagt tgacggagtt gctggttgtg ggaaaaccac ggcaattaaa tctatttttg 2280 agccgtccac tgacatgatc gttaccgcga acaagaagtc cgcccaagat gtacgtatgg 2340 cactttttaa atcgacggat tccaaagaag cctgcgcttt cgtccgaaca gctgattctg 2400 tcctacttaa cgaatgtccg actgttagta gggttttggt tgatgaggtc gtattgctgc 2460 actttggtca attatgtgcc gtcatgtcaa aattgaaggc tgtgcgagct atatgttttg 2520 gagattcgga gcagattgcc ttctcttcgc gagatgcctc atttgatatg cgtttctcta 2580 agatcattcc tgatgaaact agtgatgctg acactacatt ccgtagccca caagatgttg 2640 tgccgcttgt gcgtttaatg gctacgaagg cccttccgaa aggaactcat tcaaaataca 2700 cgaaatgggt ttctcaatct aaagtgaaaa gatctgttac atctcgtgcc atcgctactg 2760 tgacattggt tgacttggat tcttccaggt tctatttaac gatgacccaa gctgataagg 2820 cctcactgat ttcaagggcg aaagagatga atctgccaaa gactttctgg aacgaaagaa 2880 ttaagactgt gcatgagtct caaggcattt ctgaagacca cgtcactttg gtaagattaa 2940 agagcacaaa gtgtgacctg tttaaacaat tttcatattg tcttgttgct ttgactagac 3000 ataaggtcac cttccgctac gagtattgtg gtgttttaaa cggcgattta atcgctgaat 3060 gtgttgctcg tgcttagcgg ttttccctcc tccgggcggg atctgagttg gcagtaacct 3120 acaaactgtc tgaagtcact aaacacattg tggtgaacgg gttgtccatc cagcttacgg 3180 ctaaaatggt cagtcgtgga gaaatccacg ccagtagact tacaagtctc tgaggcgcct 3240 ttgaaaccat ctcctaggtt tcttcggaag gacttcggtc cgtgtacttc tagcacaagg 3300 tgctagttta gagtacgggc atccccccgt tttgcggggg tctctaaaag gagacca 3357 //