ID AJ272328; SV 2; linear; genomic RNA; STD; VRL; 2435 BP. XX AC AJ272328; XX DT 16-SEP-2000 (Rel. 65, Created) DT 30-OCT-2003 (Rel. 77, Last updated, Version 3) XX DE Pelargonium zonate spot virus genomic RNA2 for putative 2a protein (ORF1) XX KW genomic RNA2. XX OS Pelargonium zonate spot virus OC Viruses; Riboviria; Bromoviridae; Anulavirus. XX RN [1] RC revised by [3] RA Finetti M.M.; RT ; RL Submitted (17-FEB-2000) to the INSDC. RL Finetti M.M., Dipartimento Protezione Piante e Microbiologia Applicata, RL Universita degli Studi di Bari, Via Amendola 165/A, Bari, 70126, ITALY. XX RN [2] RX DOI; 10.1099/vir.0.19391-0. RX PUBMED; 14573820. RA Finetti-Sialer M.M., Gallitelli D.; RT "Complete nucleotide sequence of Pelargonium zonate spot virus and its RT relationship with the family Bromoviridae"; RL J. Gen. Virol. 84(Pt 11):3143-3151(2003). XX RN [3] RP 1-2435 RA Finetti M.M.; RT ; RL Submitted (12-MAR-2002) to the INSDC. RL Finetti M.M., Dipartimento Protezione Piante e Microbiologia Applicata, RL Universita degli Studi di Bari, Via Amendola 165/A, Bari, 70126, ITALY. XX DR MD5; 7945cc7eef9e836e9aa3215f0e041333. XX FH Key Location/Qualifiers FH FT source 1..2435 FT /organism="Pelargonium zonate spot virus" FT /host="Lycopersicon esculentum" FT /lab_host="Nicotiana glutinosa" FT /strain=" tomato" FT /mol_type="genomic RNA" FT /country="Italy:Apulia" FT /db_xref="taxon:116056" FT CDS 82..2145 FT /product="putative 2a protein" FT /function="putative RNA-dependent RNA polymerase" FT /note="ORF1" FT /db_xref="GOA:Q9DUT2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUT2" FT /protein_id="CAC08527.1" FT /translation="MAAFTFENFLSGAYTGLPIDKFRALGLNTEDYDEQRWEMLVKCVD FT SGLMQFSCSRDEALVLLWNEEELPKDDDDEVPYEVPCWTPDTDATVIDDVSEWLAEKTS FT VRDTVVVCSDYDAVSETPVEVLSVELEEDSEEDTIADVCLDARRKSFRDYFTIVEEEFV FT EEDPLISLNDGNVCPVRTHEVTSLEKPVMLDVGRRCDRVNLESLQGAINMNLPSHAYFD FT DTWHQYFVEGSKLDVDFDNIRLRQSEVFCDRDLDRYYQPELFAGASSRRIGTQKEALVA FT IRKRNADVPELADSVDVERLSESVAKKFLSSYVCDLKPVVGVMEKMRAYHQKWGDKIDP FT MFLLKEHNLQRYEHMIKTDVKPTVAHSMHVERAIPATITFHGKSICAGFSPSFTALFDE FT FQKSLDERVVIPSGPISTIEMDFDIRNKYYLEVDLSKFDKSQGLLHLEFQRKILCKIGL FT PAHLANWWCDFHYKSFISDPRAKVSFNCSFQRRTGDAFTFFGNTLVTMAMFSFCYDTRQ FT FEKMLFAGDDSLAISSSPIVGCSDYFVSLFNMEAKIMDPGVPYICSKFLVSDELGRCFS FT APDPIREFQRLGKKKISADNDDALFEQYVGFKDRMSHMRNFSEYEIQQLKIFFNLKYKQ FT SGEVIEDYMGACMFYSDNFKNFKTLFTKTCAPLVAALNKRVKDKPFRLPPSL" XX SQ Sequence 2435 BP; 637 A; 438 C; 589 G; 771 T; 0 other; ggtttgagtg cattttgtgt atttggttca attccaaatc gattaagtga cattcttact 60 cgctgtcatt tcagttcata aatggctgct tttactttcg aaaactttct ttctggcgcc 120 tacacaggcc ttcctatcga taaattcaga gctctcggtc ttaacaccga ggattatgat 180 gaacaacgtt gggagatgct tgtgaagtgt gtggacagtg gacttatgca gttctcgtgt 240 tcgcgcgacg aggcgctcgt gctgctgtgg aacgaagagg aactcccaaa agatgatgat 300 gatgaggttc cttatgaggt cccctgctgg acacccgaca ctgatgctac agtaatagac 360 gacgtgtctg agtggttggc ggagaagact tctgttcgtg acacagtagt ggtgtgttct 420 gattacgatg ctgtctctga gactcctgtt gaagtacttt ctgttgaatt ggaggaggac 480 tctgaagagg acacgattgc tgacgtttgc ctcgatgcta ggaggaaatc gtttcgcgat 540 tattttacca tagtcgaaga agaatttgta gaggaagacc ctttaatctc tttgaacgat 600 ggtaatgtgt gtccggtacg cactcatgag gtaacaagtc tggagaaacc agtgatgctt 660 gatgttggca gacgttgtga tagggtgaat cttgaatcgt tacaaggagc tattaatatg 720 aatttaccct cgcacgccta tttcgatgat acttggcacc agtattttgt ggaaggaagt 780 aaacttgacg tcgacttcga caatatcaga ttgaggcaga gtgaagtgtt ttgtgataga 840 gacttggata gatattacca acctgaactc tttgccggag ctagctcacg tcgcattgga 900 actcaaaaag aggccttagt ggccattaga aagaggaatg ctgatgttcc tgagttagcc 960 gattctgtcg atgtcgaacg tttatctgaa tctgttgcta agaagttttt atcttcgtac 1020 gtgtgtgatc taaagcccgt tgttggggtg atggaaaaaa tgcgtgcgta tcatcagaaa 1080 tggggagaca agatagatcc aatgtttttg ctgaaggaac acaatctgca gagatacgaa 1140 catatgataa aaaccgatgt gaaacccact gttgctcaca gtatgcatgt tgagagggcg 1200 atcccggcaa caataacctt tcatggcaaa tcaatttgtg ctgggttttc accttcgttt 1260 accgctctct ttgatgagtt tcagaaatct ttagatgagc gtgtggtcat cccgagtggt 1320 cctatttcta ctatagagat ggatttcgat attcgaaata agtactactt ggaggttgat 1380 ctttctaagt tcgataagtc gcaaggtttg ttgcaccttg agtttcagcg aaaaatattg 1440 tgtaaaatcg ggttacctgc tcatcttgct aactggtggt gtgactttca ctataagtct 1500 tttattagtg atccaagggc taaagtttct tttaattgtt ctttccagag acggacgggt 1560 gatgccttta cattttttgg taataccctt gttactatgg ccatgtttag cttctgttat 1620 gacactagac agtttgagaa gatgctgttt gctggtgatg attcgctagc tatcagttcg 1680 tctccgattg tcgggtgttc agattacttt gttagtctgt tcaatatgga ggcaaaaatc 1740 atggacccgg gtgttcctta tatttgttct aagttcttgg tttccgatga gcttggaagg 1800 tgtttctctg ctcccgatcc gatccgagaa ttccagagat tgggaaagaa aaagatttcc 1860 gctgataatg atgatgcgct atttgagcag tatgttgggt tcaaggatag aatgtcgcac 1920 atgcgaaatt tctctgagta tgagattcaa cagctcaaaa tcttctttaa cttaaaatat 1980 aagcaatccg gagaagttat tgaggattat atgggtgcgt gtatgtttta tagtgataat 2040 tttaaaaact tcaaaacttt gttcactaaa acgtgtgccc cattagtagc agctctaaat 2100 aagcgagtta aggacaagcc ctttaggtta cctccgagtc tgtgatctga gcaagaaggt 2160 tgatgacggt atttccgtcg gttctaacgt tttccttaaa acgtaatcgt cgttgagacg 2220 ttaatggtgt aaatcaccag ttgtaacact ttctataaag tgtaatcgtt gttaaaacgt 2280 tgattgctta caagcaatca agatacgtat cccggggctc tctgccgggt gcaacaagat 2340 aatcctcatg aggataatta gatcttgcgt atcgctgaag taattgaatg tgttggggaa 2400 cacattcttt tcttcggttt ctctaagaga gacca 2435 //