Dbfetch

ID   AJ252072; SV 1; circular; genomic DNA; STD; VRL; 1347 BP.
XX
AC   AJ252072;
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DT   10-JUN-2000 (Rel. 64, Created)
DT   28-FEB-2002 (Rel. 70, Last updated, Version 3)
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DE   Ageratum yellow vein virus satellite DNA beta C1 gene
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KW   C1 gene; DNA beta.
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OS   Ageratum yellow vein betasatellite
OC   Viruses; Tolecusatellitidae; Betasatellite.
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RN   [1]
RP   1-1347
RA   Stanley J.;
RT   ;
RL   Submitted (22-DEC-1999) to the INSDC.
RL   Stanley J., Department of Virus Research, John Innes Centre, Norwich
RL   Research Park, Colney, Norwich, NR4 7UH, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1073/pnas.97.12.6890.
RX   PUBMED; 10841581.
RA   Saunders K., Bedford I.D., Briddon R.W., Markham P.G., Wong S., Stanley J.;
RT   "A unique virus complex causes Ageratum yellow vein disease";
RL   Proc. Natl. Acad. Sci. U.S.A. 97(12):6890-6895(2000).
XX
DR   MD5; f11f247313d1accea8d391dd4915afdc.
DR   EuropePMC; PMC18771; 10841581.
DR   EuropePMC; PMC3126389; 21378048.
DR   EuropePMC; PMC4054350; 24719407.
DR   EuropePMC; PMC5377872; 28466050.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1347
FT                   /organism="Ageratum yellow vein betasatellite"
FT                   /host="Ageratum conyzoides"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /mol_type="genomic DNA"
FT                   /country="Singapore"
FT                   /clone="pBS-AYVVbeta"
FT                   /note="subviral DNA beta"
FT                   /db_xref="taxon:185750"
FT   CDS             complement(191..547)
FT                   /gene="C1"
FT                   /product="C1 protein"
FT                   /db_xref="InterPro:IPR018583"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IEZ7"
FT                   /protein_id="CAB94288.1"
FT                   /translation="MTISYTNDKGILFIINVKFRSEIKFRVDVEVFSTRSPALVKNKFS
FT                   IPYGHHGIIPPFNFNALEEGIKNILRIMYRDSTIEEFKSEDMVEIIDIMMQQEAPVIDI
FT                   QVNDEYHVYKNVTV"
XX
SQ   Sequence 1347 BP; 464 A; 211 C; 255 G; 417 T; 0 other;
     accggtggcg agcggggaat ttgggttcca ggtgggaccc acacctggaa cagcctggaa        60
     agaacgtgag tgggccaaat aagtgggccg ttgaattggg ctttttattc aaaactatct       120
     caaatttacg aagcccatta ttattcattt gagaaaaatt acattaaaca tagtccgtat       180
     aaatatacat ttatacggtt acattcttgt atacatggta ttcgtcgttt acttggatat       240
     ctattactgg agcttcctgt tgcatcatga tatctattat ttcaaccatg tcttctgatt       300
     tgaactcttc tattgttgaa tctctataca tgatccttag tatgttcttg ataccttctt       360
     ctaaagcatt aaaattgaat ggtggtatga taccgtgatg tccgtatgga atggagaatt       420
     tgttcttgac tagtgctggt gaccttgttg aaaacacttc tacgtcaact ctgaatttta       480
     tttctgatct gaacttgacg ttgatgatga acaatattcc tttatcgttg gtatatgata       540
     tagtcatgat tgtttgatgg aaatatattc atttgatgtg catttataat tggatgtgtc       600
     tgttgtatgt ggttgtgatt aatgatcgtg tcaaatttat gttcttgtat taattagtgt       660
     atgtgtgact gtattgatgt tgatgtttgt gattataatt gagaaaagaa gatattcatt       720
     catttgaata agaaaagaaa gaaaaaaaaa agaaaactat atacataaaa aaaacgaata       780
     ataaaaataa ctatctattc agaaaaaatg ggagcgcagc gaaaacgaaa acaaaaatcg       840
     atatcaaaga aaatcctgat aaattaaata gacagaattg aaaaggaaaa aagtaaaaaa       900
     agataaaagt tattacatta aaaaaactaa agaaaaaaaa aataaaaaaa ctaaaaatga       960
     taaataaaaa aatgacgtca tctgatgtca tcacagttaa aaactattta ctgcggttaa      1020
     aatttaatat aattaaccac ttgggtaaat atattgtctc caataggtaa attgtctcca      1080
     atatatcgga gacatattgg agactctgga gacacttata tgctaatttc ccattttacc      1140
     cttactaatg tgactgtaag gcgcgtggga gtgctctgaa aaagtagacc ttctctctcc      1200
     aaaactcccc ggagaagacg atacaggctg atcccggcat caattcgcga cacgcgcggc      1260
     ggtgtgtacc cctgggaggg tagaaaccac tacgctacgc agcagcctta gctacgccgg      1320
     agcttagctc gccaccgtaa taatatt                                          1347
//