ID   AJ244059; SV 1; linear; genomic RNA; STD; VRL; 1180 BP.
XX
AC   AJ244059;
XX
DT   04-APR-2000 (Rel. 63, Created)
DT   04-APR-2000 (Rel. 63, Last updated, Version 1)
XX
DE   Yam mosaic virus partial RNA for coat protein, isolate CKA1/C11
XX
KW   coat protein; cp gene.
XX
OS   Yam mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1180
RA   Bousalem M.;
RT   ;
RL   Submitted (27-APR-1999) to the INSDC.
RL   Bousalem M., Laboratoire de Virologie des Regions Chaudes (LPRC), Institut
RL   pour la Recherche et le Developpement (IRD), LPRC/CIRAD-IRD, BP.5035,
RL   Montpellier, 34032, FRANCE.
XX
RN   [2]
RP   1-1180
RX   PUBMED; 10640564.
RA   Bousalem M., Douzery E.J.P., Fargette D.;
RT   "High genetic diversity, distant phylogenetic relationships and
RT   intraspecies recombination events among natural populations of Yam mosaic
RT   virus: a contribution to understanding potyvirus evolution";
RL   J. Gen. Virol. 81(Pt 1):243-255(2000).
XX
DR   MD5; 48cc5546c0268d770b9e8292c7854ae2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1180
FT                   /organism="Yam mosaic virus"
FT                   /isolate="CKA1/C11"
FT                   /mol_type="genomic RNA"
FT                   /country="Cote d'Ivoire"
FT                   /db_xref="taxon:41460"
FT   CDS             <109..>1016
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9IW74"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q9IW74"
FT                   /protein_id="CAB86254.1"
FT                   /translation="ADTQPDDEGKTIDAGKSTGFRNKEKGVTNTSSEHNNAGKKTPISE
FT                   DRSETNKAQSSGDGILATRDRDIDAGTVGSVLPRLARKNFSNKMVLPMVRGKSILNLDH
FT                   LVKYEPAQVFLSNTRATQAQFDVWYMAIKRFYELEDEQMGMIMNGLMVWCIENGTSPNL
FT                   SGMWTMIDGGEQVEYPLKPIIENAKPTFRQIMMHFSDAAEAYIELRNSKEPYMPRYGIQ
FT                   RNLRDYSLARYAFDFLEITSKTPVRAREAHHQMKAAAIGNKVNKMFGFDGKVGSQEEDT
FT                   ERHAAGDVTKDMHSLLGMRGM"
XX
SQ   Sequence 1180 BP; 391 A; 205 C; 285 G; 299 T; 0 other;
     gctctctata ctaatcaagc tccaactagc aatgaattgt ctaagtatgt acaacatata        60
     atggaggatt tttgcaatga agatgaaata tgctacgtaa gccaccaggc ggatacacag       120
     ccagatgatg aaggcaagac tattgatgct ggaaaaagta ctggatttag aaacaaggaa       180
     aagggtgtga ctaatacttc atctgaacat aataatgccg gaaagaaaac tccaatatca       240
     gaagacagga gtgaaacaaa taaagcacaa tcaagcggtg atgggatcct agcaacgcgt       300
     gatagagata ttgatgctgg aactgttgga tcggttcttc ctagactggc taggaaaaat       360
     tttagtaata agatggtttt gcctatggtt cggggaaagt ctatactgaa tctcgaccat       420
     cttgtaaagt atgagcccgc tcaagttttt ctatcaaata cacgagctac acaagcacag       480
     tttgatgtat ggtacatggc aatcaaaagg ttttatgaac tcgaagacga gcagatgggc       540
     atgatcatga atggactgat ggtgtggtgc atagaaaatg gcacttcacc aaatttatcc       600
     ggaatgtgga caatgataga cggcggggag caagtggaat atccattaaa gccgatcata       660
     gaaaatgcca aacccacatt tcgtcagata atgatgcatt tcagtgacgc agctgaagcg       720
     tacattgaat tgcggaactc aaaagaaccg tatatgcccc gatacggtat tcagcgcaac       780
     ttgagggatt actcactggc aaggtacgca ttcgatttct tagagataac ctctaaaact       840
     ccagttcgag cgcgtgaagc acaccatcag atgaaggcag cagcaattgg aaacaaggtt       900
     aacaaaatgt ttggatttga tggcaaagtg ggctcccagg aagaggatac agaaaggcac       960
     gctgcgggtg atgtcacaaa agacatgcac agccttttag gcatgagagg tatgtagagt      1020
     gttaattata tatcagttat atatataatt ctgttatgcc tacctaatat atgttggttg      1080
     caaacattct gtgtttgtga gaagacatat tctaaagtta cattttggag gagctcaaga      1140
     gtgtctatga cacggaggtc tctttgatgt ggcggaggag                            1180
//