ID   AJ243470; SV 1; linear; genomic RNA; STD; VRL; 983 BP.
XX
AC   AJ243470;
XX
DT   07-JAN-2000 (Rel. 62, Created)
DT   07-JAN-2000 (Rel. 62, Last updated, Version 1)
XX
DE   Cocksfoot mottle virus RNA representing defective interfering RNA type 1
XX
KW   coat protein; cp gene; defective interfering rna.
XX
OS   Cocksfoot mottle virus
OC   Viruses; Riboviria; Solemoviridae; Sobemovirus.
XX
RN   [1]
RP   1-983
RA   Makinen K.M.;
RT   ;
RL   Submitted (17-JUN-1999) to the INSDC.
RL   Makinen K.M., Institute of Biotechnology, University of Helsinki, P.O.Box
RL   56, Viikinkaari9, FIN-00014 University of Helsinki, FINLAND.
XX
RN   [2]
RA   Makinen K., Generozov E., Arshava N., Kaloshin A., MOrozov S.Y.,
RA   Zavriev S.;
RT   "Characterization of defective interfering-like RNAs in cocksfoot mottle
RT   sobemovirus.";
RL   Unpublished.
XX
DR   MD5; 0821213baa078373156000ce80ad7bd6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..983
FT                   /organism="Cocksfoot mottle virus"
FT                   /host="Dactylis glomerata"
FT                   /lab_host="Avena sativa, Hordeum vulgare"
FT                   /isolate="Russian"
FT                   /mol_type="genomic RNA"
FT                   /country="Russia"
FT                   /note="DI-RNA type 1"
FT                   /db_xref="taxon:40979"
FT   5'UTR           1..91
FT   CDS             92..757
FT                   /gene="CP"
FT                   /note="putative truncated coat protein"
FT                   /db_xref="GOA:Q9PWT2"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q9PWT2"
FT                   /protein_id="CAB64891.1"
FT                   /translation="MEPVSRPLNPPAAVGSTLKAGRGKTAGVSDWFDTGMITSYLGGFQ
FT                   RTAGTTDSQVFIVSPAALDRVGTIAKAYALWRPKHWEIVYLPRCSTQTDGSIEMGFLLD
FT                   YADSVPTNTRTMASSTSFTTSNVWGGGDGSSLLHTSMKSMGNAVTSALPCDEFSNKWFK
FT                   LSWSTPEESENAHLTDTYVPARFVVRSDFPVVTADQPGHLWLRSRILLKGSVSPSTNL"
FT   3'UTR           758..983
XX
SQ   Sequence 983 BP; 212 A; 257 C; 270 G; 244 T; 0 other;
     ataatagtgc gaagaaagac acactgttat cgttccaaaa cccagagctc agcagcagcc        60
     tgggggccgc cgcaggaggc gtggccggtc gatggagcca gtctctcgac ctttgaaccc       120
     tccagcggcg gttggttcca ccttgaaggc tggtagaggc aagactgctg gtgtgagtga       180
     ctggtttgat accggtatga tcaccagcta tctgggcggt ttccagcgca cagctgggac       240
     cactgactcc caagttttca ttgtgtcacc cgctgctttg gaccgtgttg gaaccatagc       300
     caaggcgtat gcgttgtgga gacctaagca ttgggaaatc gtgtatctcc ccagatgttc       360
     tactcagaca gatgggtcga ttgaaatggg atttctctta gattatgcgg atagcgtccc       420
     aaccaacacc cgaactatgg cctcctctac ctccttcaca acttcaaacg tgtggggagg       480
     tggggatggc agcagcttgc tgcacacgtc catgaagtcc atgggcaacg ctgttacgag       540
     tgctcttccc tgtgacgagt tctcgaacaa gtggtttaag ttatcttgga gcactcctga       600
     ggaatcggag aacgctcatt tgactgacac ctatgttccg gcgcgcttcg tggtgaggtc       660
     tgacttcccg gtagtcacgg ctgaccaacc tggtcatctt tggcttcggt ccaggatctt       720
     gctcaaggga tcggtttccc cttctacaaa tctgtagtta agtaccgcag ggatggcaaa       780
     cctgtataac agtgcccgcg cttggtggag tcgcgtttgt ccacttggaa atctaactcc       840
     aaagctttgc ttgaagattg acggattggt atcatctccg taaggatacc gaccactggc       900
     tgggctcgtc acccctcctt tgtgtctcac aaacgacgaa tctgcgctcg gcaaatgaca       960
     ggatcatggc cggggcaggt gct                                               983
//