ID   AJ237850; SV 2; linear; genomic RNA; STD; VRL; 2213 BP.
XX
AC   AJ237850;
XX
DT   24-APR-1999 (Rel. 59, Created)
DT   25-APR-2003 (Rel. 75, Last updated, Version 3)
XX
DE   Cucumber mosaic virus 3a gene for movement protein and cp gene for coat
DE   protein, genomic RNA, strain Pf
XX
KW   3a gene; coat protein; cp gene; movement protein.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RC   revised by [3]
RA   Ryu K.H.;
RT   ;
RL   Submitted (23-APR-1999) to the INSDC.
RL   Ryu K.H., Department of Horticultural Science, Seoul Women s University,
RL   Seoul 139-774, 139-774, SOUTH KOREA.
XX
RN   [2]
RA   Choi S.K., Yoon M.Y., Park W.M., Ryu K.H.;
RT   "Amplification of CP gene of CMV-Pf strain by the RT-PCR with the
RT   cucumovirus specific primers";
RL   Unpublished.
XX
RN   [3]
RP   1-2213
RA   Ryu K.H.;
RT   ;
RL   Submitted (18-NOV-2002) to the INSDC.
RL   Ryu K.H., Department of Horticultural Science, Seoul Women s University,
RL   Seoul 139-774, 139-774, SOUTH KOREA.
XX
DR   MD5; 653ff443c39ea8c70b5157eaddeb1d49.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2213
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /strain="Pf"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12305"
FT   5'UTR           1..119
FT                   /gene="3a"
FT   CDS             120..959
FT                   /gene="3a"
FT                   /product="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B3N4"
FT                   /protein_id="CAD58625.1"
FT                   /translation="MAFQGTNRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYTGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEDLNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   misc_feature    960..1256
FT                   /note="intercistronic region"
FT   CDS             1257..1913
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /function="encapsidation"
FT                   /db_xref="GOA:Q9WA73"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WA73"
FT                   /protein_id="CAB41491.1"
FT                   /translation="MDKSESTSAGRNRRRRPRCGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCRPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDTLETDELVLHVDIEHQRIPTSGVLPV"
FT   3'UTR           1914..2213
FT                   /gene="cp"
XX
SQ   Sequence 2213 BP; 515 A; 521 C; 528 G; 649 T; 0 other;
     ggtaatctta ccactgtgtg tgtgcgtgtg tgtgtgtcga gtcgtgctgt ccgcacattt        60
     atctgtcgag tcgtgctgtc cgcacattta tctttacagt gtgttagatt tcccgaggca       120
     tggctttcca aggtaccaat aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata acgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttccttct ttaagtctgg atatgatgtt ggtgaattgt       360
     gctcaaaagg atacatgagt gtccctcaag tgttatgtgc tgttactcga acagtttcca       420
     ctgatgctga agggtctttg agaatttact tagctgatct aggcgacaag gagttatctc       480
     ccatagatgg gcaatgcgtt tcgttacata accatgatct tcccgctttg gtgtctttcc       540
     aaccgacgta tgattgtcct atggagacag ttgggaatcg taagcggtgt tttgctgtcg       600
     ttatcgaaag acatggttac actgggtata ccggcaccac agctagcgtg tgtagtaatt       660
     ggcaagcaag gttttcgtct aagaataaca actacactca catcgcagct gggaagactc       720
     tagtactgcc tttcaacaga ttggctgagc aaacaaaacc gtcagctgtt gctcgcctgt       780
     tgaagtcgca attgaacaat attgaatctt cgcagtattt gttaacgaac gcgaagatta       840
     atcaaaatgc gcgcagtgag tccgaggatt taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgt tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc gtattagtat ataagtattt gtgtgtctgt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagtc tacttcatag ttttgaggtt caattcctct tactccctgt      1140
     tgagctcctt actttctcat ggatgcttct ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtttgtgctg tgttttctct tttgcgtcgt agaattgagt cgagtcatgg      1260
     acaaatctga atcaaccagt gctggtcgta accgtcgacg tcgtccgcgt tgcggttccc      1320
     gctccgctcc ctcctccgcg gatgctaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaataagac gttagcagct ggtcgtccaa ctattaacca cccaaccttt gtagggagtg      1440
     aacgctgtag acctgggtac acgttcacat ctataaccct gaagccaccg aaaatagacc      1500
     gtgggtctta ttatggtaag aggttgttat tacctgattc agtcacggaa tatgataaga      1560
     agcttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta      1680
     tgttcgcgga cggagcctca ccggtactgg tttatcagta tgccgcatct ggagtccaag      1740
     ccaacaacaa gttgttgtat gatctttcgg cgatgcgcgc tgatataggt gacatgagaa      1800
     agtacgccgt cctcgtgtat tcaaaagacg atacgctcga gacggacgag ctagtacttc      1860
     atgttgacat cgagcaccaa cgcattccca catctggagt gctcccagtc tgattccgtg      1920
     ttcccagaat cctccctccg atctctgtgg cgggagctga gttggtagtt ctgctataaa      1980
     ctatctaaag tcactaaaca cacactgtgg tgaacgggtt gtccatccag cttacggcta      2040
     aaatggtcag tcgtagagaa atctacgcca gcagacttac aagtctctga ggcacctttg      2100
     aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtacttctag cacaacgtgc      2160
     tagtttcagg gtacggtgcc ccccactttt gtggggtctc caaaaggaga cca             2213
//