Dbfetch
ID AJ225007; SV 1; circular; genomic DNA; STD; VRL; 2685 BP. XX AC AJ225007; XX DT 17-MAR-1998 (Rel. 55, Created) DT 09-SEP-2004 (Rel. 81, Last updated, Version 5) XX DE Maize streak virus - Reunion [SP1R10] complete genome, isolate SP1, clone DE R10 XX KW capsid protein; complete genome. XX OS Maize streak virus - Reunion [SP1R10] OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2685 RA Peterschmitt M.; RT ; RL Submitted (23-FEB-1998) to the INSDC. RL Peterschmitt M., CIRAD-AMIS, Programme Protection des Cultures, CIRAD, BP RL 5035, 34032 Montpellier Cedex 1, FRANCE. XX RN [2] RX DOI; 10.1007/BF01718288. RX PUBMED; 8893787. RA Peterschmitt M., Granier M., Frutos R., Reynaud B.; RT "Infectivity and complete nucleotide sequence of the genome of a RT genetically distinct strain of maize streak virus from Reunion Island"; RL Arch. Virol. 141(9):1637-1650(1996). XX RN [3] RA Isnard M., Granier M., Frutos R., Reynaud B., Peterschmitt M.; RT "Quasispecies nature of three related maize streak virus isolates obtained RT through different modes of selection from a population used to asses RT response to infection of maize cultivars"; RL J. Gen. Virol. 79:3091-3099(1998). XX DR MD5; f755e246fac10a63fe3d0db548fbde0b. XX FH Key Location/Qualifiers FH FT source 1..2685 FT /organism="Maize streak virus - Reunion [SP1R10]" FT /isolate="SP1" FT /mol_type="genomic DNA" FT /clone="R10" FT /db_xref="taxon:268338" FT CDS join(2684..2685,1..304) FT /gene="MP" FT /product="10.9 kd MP protein" FT /db_xref="GOA:O73469" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:O73469" FT /protein_id="CAA12307.1" FT /translation="MDPQNSLYVQPRVPTAAPTSAGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEEMIFGGQAVDRSNPIPNIPAPPSQGNPGPFVPGTG" FT CDS complement(161..505) FT /product="13.1 kd protein" FT /db_xref="InterPro:IPR009529" FT /db_xref="UniProtKB/TrEMBL:O73470" FT /protein_id="CAA12308.1" FT /translation="MRSHTPPEGTVIMVVPECWSVWIWRDGLSALLPALFSPAEEGFFL FT ETRLFQFESSPRFLLDVDMADCLSRAWNKWPGIALTWWCWYIRDRVAPIHSLSTKYHLL FT RGSALASLQN" FT CDS 315..1049 FT /gene="CP" FT /product="27.0 kd virion capsid protein" FT /db_xref="GOA:O73471" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:O73471" FT /protein_id="CAA12309.1" FT /translation="MSTSKRKRGDDSNWNKRVSKKKPSSAGLKRAGSKADRPSLQIQTL FT QHSGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAIDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(387..1007) FT /product="21.7 kd protein" FT /db_xref="InterPro:IPR009421" FT /db_xref="UniProtKB/TrEMBL:O73472" FT /protein_id="CAA12310.1" FT /translation="MGSKCKAIAGGNDHVQSSSLDGTNSSVRYILPLRSHSQPTRELVE FT VDVALARLPTCIRWRNVRTNPPVGLHVEQPTPFHHEAMTQLPAHLPCRRPRFEGVRVGK FT YSLRGRSLSAGSGVIHQPHHTGSGVGVPAGCRVSNEVVVDGNLVRQSLAGVAVALVRSS FT GIGVDEVTYASGGDRYHGGPGMLECLDLEGWPIGLAASPLQPS" FT CDS 734..1030 FT /product="11.1 kd protein" FT /db_xref="UniProtKB/TrEMBL:Q77B38" FT /protein_id="CAA12311.1" FT /translation="MEGEPGAVSSLRGETALVVQHGDRRADWFGHSSIECKLEALQAQH FT LLPQVHEWVGSENAVEECNGRRSWCHPERSFVHGHCPRQWPYIYCPWADPSVL" FT CDS complement(1200..1661) FT /gene="repB" FT /product="17.6 kd RepB protein" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q77B37" FT /protein_id="CAA12312.1" FT /translation="MDGFCIQSSDEGSRKQSLYIVGPTRTGKSTWARSLGVHNYWQNNV FT DWSSYNEDAIYNIVDDIPFKFCPCWKQLVGCQKDFIVNPKYGKKKKVQKKSKPTIILAN FT SDEDWMKEMTPGQLEYFEANCTIYIMSPGEKWYSPRELPPTEAVHSDTS" FT CDS complement(1556..2374) FT /gene="repA" FT /product="31.5 kd RepA protein" FT /db_xref="GOA:Q77B36" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q77B36" FT /protein_id="CAA12313.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAMFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHSTSKEEYLSMIQKEFPY FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSVSSHQMKDQESRASTSSGQQEQESLLGPEA" XX SQ Sequence 2685 BP; 677 A; 627 C; 688 G; 693 T; 0 other; ggatccacag aactccttgt atgtacagcc gcgggtaccc acagcagctc cgacctccgc 60 aggagtgccg tggagtcgcg taggcgaggt agctattttg agctttgttg cattgatttg 120 cttttacctg ctttaccttt gggtgctgag agaccttatc ttagttctga aggctcgcca 180 aggcagatcc acggaggaga tgatatttgg tggacaagct gtggatagga gcaaccctat 240 ccctaatata ccagcaccac caagtcaggg caatcccggg ccatttgttc caggcacggg 300 ataagcaatc agccatgtcc acgtccaaga ggaagcgggg agatgattcg aattggaata 360 agcgggtttc taagaagaag ccttcttcag ctgggctgaa gagggctggc agcaaggccg 420 ataggccatc cctccaaatc cagacactcc agcattccgg gaccaccatg ataacggtcc 480 cctccggagg cgtatgtgac ctcatcaaca cctatgcccg aggatctgac gagggcaacc 540 gccacaccag cgagactctg acgtacaaga ttgccatcga ctaccacttc gttgctgacg 600 cggcagcctg ccggtactcc aacaccggaa ccggtgtgat gtggctggtg tatgacacca 660 ctcccggcgg acaagctccg accccgcaga ctatatttgc ctacccggac accctcaaag 720 cgtggccggc gacatggaag gtgagccggg agctgtgtca tcgcttcgtg gtgaaacggc 780 gttggttgtt caacatggag accgacgggc ggattggttc ggacattcct ccatcgaatg 840 caagttggaa gccttgcaag cgcaacatct acttccacaa gttcacgagt gggttgggag 900 tgagaacgca gtggaagaat gtaacggacg gaggagttgg tgccatccag agaggagctt 960 tgtacatggt cattgccccc ggcaatggcc ttacatttac tgcccatggg cagacccgtc 1020 tgtactttaa gagtgttggc aaccagtaat gaataaaact ccgtttttat tatatttcat 1080 gaatgctgaa agcttacatt aatatgtcgt gcgatggcac gaaaaacaca cacaatcaat 1140 acaggggggt agtcggcggg cggctaaggg tggtgctcgg cgggcaaaac atcgaaaaat 1200 caagatgtat ctgaatgtac tgcctccgta ggaggcagct cacggggaga ataccatttc 1260 tcccctggcg acataatgta aatggtgcag tttgcctcga aatactccag ctgccctgga 1320 gtcatttctt tcatccaatc ttcatccgag ttggcgagga ttattgtagg cttagacttc 1380 ttctgcacct tcttcttctt accatacttg gggttgacaa tgaaatcttt ctggcagcca 1440 actaactgtt tccaacaagg acagaattta aatggaatat cgtctacgat gttgtagatt 1500 gcgtcttcgt tgtatgaaga ccaatcaaca ttattttgcc agtaattatg aacccctagg 1560 cttctggccc aagtagactt tcctgttctt gttggcccga cgatgtagag gctctgcttt 1620 cttgatcctt catctgatga ctggatacag aatccatcca ttggaggtca gagattgcat 1680 cctcgagggt ataacaggta ggttgaagga gcatgtaagc ttcgggactg acctggaaga 1740 tgttaggctg gagccaatca ttgattgact cattacagag taaatcaggt gaggagggtg 1800 gatgaggatt ggtgaactct tcctgaattt caggaaaaag tttatttgca gagtattcaa 1860 aatactgcaa ttttgtggac caatcatagg gaaactcttt ctggatcata gagaggtact 1920 cttccttgga ggtggagtgt gaaataatgt ctcgcattat ttcatctttt gaaggctttt 1980 tttcctttac ttctgaatca gattttccta ggaaggggga cttcctagga atgaaagtac 2040 ctctctcaaa catagccagc ggttccttga gaatgtaatc tctcaccctg ttgactgatt 2100 tggcactctg aatatttggg tgaaacccat ttatatcaaa gaaccttgag tcagatatcc 2160 ttaccggctt ctctgtctga agcaatgcat gtaaatgcaa acttccatct ttatgtgcct 2220 ctcgggcaca tagaatatac ttgggtatcc aacgaacaac gagctcccaa atcatctgac 2280 aggcgatttc aggattttct gggcactttg gataggtaag gaacgtgtta gcgttcctgt 2340 gtgagaactg acggttggat gaggaggagg ccatatccga cgacggagga cgtggctaag 2400 tgatggcaga ttgggagctc tcaactctat aacaaccggt gcgccttcga aatccgccgc 2460 tcctcgtttt atactggttg taaatgggcc ggaccgggcc ggcccagcag gaaaagaagg 2520 cgcgcactaa tattaccgcg ccttcttttc ctgcgaggtc ccggtaggga ccgagcgatt 2580 tgatttaaag cttggtcctg ctttgtatga tttatctaaa gcagcctaat ctaaagaatc 2640 cggtcccggg cactataaat tgtctaacaa gtgcgattca ctcat 2685 //