ID   AJ225005; SV 1; linear; genomic DNA; STD; VRL; 1092 BP.
XX
AC   AJ225005;
XX
DT   17-MAR-1998 (Rel. 55, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Maize streak virus DNA for partial repB, repA, MP genes, isolate SP2, clone
DE   14
XX
KW   MP gene; repA gene; repB gene.
XX
OS   Maize streak virus
OC   Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes;
OC   Geplafuvirales; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-1092
RA   Peterschmitt M.;
RT   ;
RL   Submitted (23-FEB-1998) to the INSDC.
RL   Peterschmitt M., CIRAD-AMIS, Programme Protection des Cultures, CIRAD, BP
RL   5035, 34032 Montpellier Cedex 1, FRANCE.
XX
RN   [2]
RX   DOI; 10.1007/BF01718288.
RX   PUBMED; 8893787.
RA   Peterschmitt M., Granier M., Frutos R., Reynaud B.;
RT   "Infectivity and complete nucleotide sequence of the genome of a
RT   genetically distinct strain of maize streak virus from Reunion Island";
RL   Arch. Virol. 141(9):1637-1650(1996).
XX
RN   [4]
RA   Isnard M., Granier M., Frutos R., Reynaud B., Peterschmitt M.;
RT   "Quasispecies nature of three related maize streak virus isolates obtained
RT   through different modes of selection from a population used to asses
RT   response to infection of maize cultivars";
RL   J. Gen. Virol. 79:3091-3099(1998).
XX
DR   MD5; a06231ca33bacfa50b55e36f0b69edff.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1092
FT                   /organism="Maize streak virus"
FT                   /isolate="SP2 from Reunion Island"
FT                   /mol_type="genomic DNA"
FT                   /clone="14"
FT                   /db_xref="taxon:10821"
FT   CDS             complement(<1..775)
FT                   /gene="repA"
FT                   /product="31.5 kd RepA protein"
FT                   /db_xref="GOA:O73466"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:O73466"
FT                   /protein_id="CAA12298.1"
FT                   /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK
FT                   YIICAREAHKDGSWHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE
FT                   PLAMFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHSTSKEEYLSMIQKEFPY
FT                   DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML
FT                   LQPTCYTLEDAISDLQWMDSVSRHQMKDQESRASTS"
FT   CDS             complement(<1..62)
FT                   /gene="repB"
FT                   /product="17.6 kd RepB protein"
FT                   /db_xref="UniProtKB/TrEMBL:O93050"
FT                   /protein_id="CAA12297.1"
FT                   /translation="MDGFCIQTSDEGSRKQSLYIV"
FT   intron          42..133
FT                   /note="C-sense intron"
FT   misc_feature    929..937
FT                   /note="conserved nonanucleotide in the large intergenic
FT                   region"
FT   CDS             1085..>1092
FT                   /gene="MP"
FT                   /product="10.9 kd MP protein"
FT                   /protein_id="CAA12299.1"
FT                   /translation="MDP"
XX
SQ   Sequence 1092 BP; 282 A; 228 C; 270 G; 312 T; 0 other;
     acgatgtaga ggctctgctt tcttgatcct tcatctgatg tctggataca gaatccatcc        60
     attggaggtc agagattgca tcctcgaggg tataacaggt aggttgaagg agcatgtaag       120
     cttcgggact gacctggaag atgttaggct ggagccaatc attgattgac tcattacaga       180
     gtaaatcagg tgaggagggt ggatgaggat tggtgaactc ttcctgaatt tcaggaaaaa       240
     gtttatttgc agagtattca aaatactgca attttgtgga ccaatcatag ggaaactctt       300
     tctggatcat agagaggtac tcttccttgg aggtggagtg tgaaataatg tctcgcatta       360
     tttcatcttt tgaaggcttt ttttccttta cttctgaatc agattttcct aggaaggggg       420
     acttcctagg aatgaaagta cctctctcaa acatagccag cggttccttg agaatgtaat       480
     ctctcaccct gttgactgat ttggcactct gaatatttgg gtgaaaccca tttatatcaa       540
     agaaccttga gtcagatatc cttaccggct tctctgtctg aagcaatgca tgtaaatgcc       600
     aacttccatc tttatgtgcc tctcgggcac atataatata cttgggtatc caacgaacaa       660
     cgagctccca aatcatctga caggcgattt caggattttc tgggcacttt ggataggtaa       720
     ggaacgtgtt agcgttcctg tgtgagaact gacggttgga tgaggaggag gccatatccg       780
     acgacggagg acgtggctaa gtgatggcag attgggagct ctcaactcta taacaaccgg       840
     tgcgccttcg aaatccgccg ctcctcgttt tatactggtt gtaaatgggc cggaccgggc       900
     cggcccagca ggaaaagaag gcgcgcacta atattaccgc gccttctttt cctgcgaggt       960
     cccggtaggg accgagcgat ttgatttaaa gcttggtcct gctttgtatg atttatctaa      1020
     agcagcctaa tctaaagaat ccggtcccgg gcactataaa ttgtctaaca agtgcgattc      1080
     actcatggat cc                                                          1092
//